References
- Iyer MK , NiknafsYS , MalikRet al. The landscape of long noncoding RNAs in the human transcriptome . Nat. Genet.47 ( 3 ), 199 – 208 ( 2015 ).
- Crea F , WatahikiA , QuagliataLet al. Identification of a long non-coding RNA as a novel biomarker and potential therapeutic target for metastatic prostate cancer . Oncotarget5 ( 3 ), 764 – 774 ( 2014 ).
- Hon CC , RamilowskiJA , HarshbargerJet al. An atlas of human long non-coding RNAs with accurate 5′ ends . Nature543 ( 7644 ), 199 – 204 ( 2017 ).
- Liu SJ , NowakowskiTJ , PollenAAet al. Single-cell analysis of long non-coding RNAs in the developing human neocortex . Genome Biol.17 , 67 ( 2016 ).
- Quagliata L , MatterMS , PiscuoglioSet al. Long noncoding RNA HOTTIP/HOXA13 expression is associated with disease progression and predicts outcome in hepatocellular carcinoma patients . Hepatology59 ( 3 ), 911 – 923 ( 2014 ).
- Gupta RA , ShahN , WangKCet al. Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis . Nature464 ( 7291 ), 1071 – 1076 ( 2010 ).
- Anderson DM , AndersonKM , ChangCLet al. A micropeptide encoded by a putative long noncoding RNA regulates muscle performance . Cell160 ( 4 ), 595 – 606 ( 2015 ).
- Cech TR , SteitzJA . The noncoding RNA revolution-trashing old rules to forge new ones . Cell157 ( 1 ), 77 – 94 ( 2014 ).
- Cabrera-Quio LE , HerbergS , PauliA . Decoding sORF translation – from small proteins to gene regulation . RNA Biol.13 ( 11 ), 1051 – 1059 ( 2016 ).
- Bazzini AA , JohnstoneTG , ChristianoRet al. Identification of small ORFs in vertebrates using ribosome footprinting and evolutionary conservation . EMBO J.33 ( 9 ), 981 – 993 ( 2014 ).
- Lauressergues D , CouzigouJM , ClementeHSet al. Primary transcripts of microRNAs encode regulatory peptides . Nature520 ( 7545 ), 90 – 93 ( 2015 ).
- Nam JW , ChoiSW , YouBH . Incredible RNA: dual functions of coding and noncoding . Mol. Cells39 ( 5 ), 367 – 374 ( 2016 ).
- Prieto-Godino LL , RytzR , BargetonBet al. Olfactory receptor pseudo-pseudogenes . Nature539 ( 7627 ), 93 – 97 ( 2016 ).
- Adelman K , EganE . Non-coding RNA: More uses for genomic junk . Nature543 ( 7644 ), 183 – 185 ( 2017 ).
- Bose DA , DonahueG , ReinbergD , ShiekhattarR , BonasioR , BergerSL . RNA binding to CBP stimulates histone acetylation and transcription . Cell168 ( 1–2 ), 135.e122 – 149.e122 ( 2017 ).
- Wright MW . A short guide to long non-coding RNA gene nomenclature . Hum. Genomics8 , 7 ( 2014 ).
- Niazi F , ValadkhanS . Computational analysis of functional long noncoding RNAs reveals lack of peptide-coding capacity and parallels with 3′ UTRs . RNA18 ( 4 ), 825 – 843 ( 2012 ).