Racial and Ethnic Representation in Epigenomic Studies of Preterm Birth: A Systematic Review

References

• Martin J , HamiltonB , OstermanM , DriscollA. Births: final data for 2018. Natl Vital Stat. Reports68(13), 68 (2019).
   Google Scholar
• Ely DM , DriscollAK. Infant mortality in the United States, 2017: data from the period linked birth/infant death file. Natl Vital Stat. Reports68(10), 1–20 (2019).
   Google Scholar
• Burris HH , LorchS , KirpalaniHet al. Racial disparities in preterm birth in USA: a biosensor of physical and social environmental exposures. Arch. Dis. Child.104(10), 931–935 (2019).
   PubMed Web of Science ®Google Scholar
• David RJ , CollinsJW. Differing birth weight among infants of U.S.-born Blacks, African-born Blacks, and U.S.-born Whites. N. Engl. J. Med.337, 1209–1214 (1997).
   PubMed Web of Science ®Google Scholar
• Elo IT , VangZ , CulhaneJF. Variation in birth outcomes by mother’s country of birth among non-hispanic Black women in the United States. Matern. Child Health J.18(10), 2371–2381 (2014).
   PubMed Web of Science ®Google Scholar
• York TP , StraussJF , NealeMC , EavesLJ. Racial differences in genetic and environmental risk to preterm birth. PLoS ONE5(8), 5 (2010).
   Web of Science ®Google Scholar
• Burris HH , HackerMR. Birth outcome racial disparities: a result of intersecting social and environmental factors. Semin. Perinatol.41(6), 360–366 (2017).
   PubMed Web of Science ®Google Scholar
• Cushing L , FaustJ , AugustLM , CendakR , WielandW , AlexeeffG. Racial/ethnic disparities in cumulative environmental health impacts in California: evidence from a statewide environmental justice screening tool (CalEnviroScreen 1.1). Am. J. Public Health105(11), 2341–2348 (2015).
   PubMed Web of Science ®Google Scholar
• Morello-Frosch R , JesdaleBM. Separate and unequal: residential segregation and estimated cancer risks associated with ambient air toxins in U.S. metropolitan areas. Environ. Health Perspect.114(3), 386–393 (2006).
   PubMed Web of Science ®Google Scholar
• Mohai P , SahaR. Racial inequality in the distribution of hazardous waste: a national-level reassessment. Soc. Probl.54(3), 343–370 (2007).
   Web of Science ®Google Scholar
• Pratt GC , VadaliML , KvaleDL , EllicksonKM. Traffic, air pollution, minority and socio-economic status: addressing inequities in exposure and risk. Int. J. Environ. Res. Public Health12(5), 5355–5372 (2015).
   PubMed Web of Science ®Google Scholar
• Mohai P , LantzPM , MorenoffJ , HouseJS , MeroRP. Racial and socioeconomic disparities in residential proximity to polluting industrial facilities: evidence from the Americans’ Changing Lives Study. Am. J. Public Health99(Suppl. 3), S649–S656 (2009).
   PubMedGoogle Scholar
• Collins JW , DavidRJ , HandlerA , WallS , AndesS. Very low birthweight in African American infants: the role of maternal exposure to interpersonal racial discrimination. Am. J. Public Health94(12), 2132–2138 (2004).
   PubMed Web of Science ®Google Scholar
• Mendez DD , HoganVK , CulhaneJF. Institutional racism, neighborhood factors, stress, and preterm birth. Ethn. Heal.19(5), 479–499 (2014).
   PubMed Web of Science ®Google Scholar
• Krivo LJ , VélezMB , LyonsCJ , PhillipsJB , SabbathE. Race, crime, and the changing fortunes of urban neighborhoods, 1999-2013. Du Bois Rev.15(1), 47–68 (2018).
   Web of Science ®Google Scholar
• Krivo LJ , PetersonRD , KuhlDC. Segregation, racial structure, and neighborhood violent crime. Am. J. Sociol.114(6), 1765–1802 (2009).
   PubMed Web of Science ®Google Scholar
• Bellavia A , UrchB , SpeckMet al. DNA hypomethylation, ambient particulate matter, and increased blood pressure: findings from controlled human exposure experiments. J. Am. Heart Assoc.2(3), e000212 (2013).
   PubMed Web of Science ®Google Scholar
• Weaver ICG , CervoniN , ChampagneFAet al. Epigenetic programming by maternal behavior. Nat. Neurosci.7, 847–854 (2004).
   PubMed Web of Science ®Google Scholar
• Oberlander TF , WeinbergJ , PapsdorfM , GrunauR , MisriS , DevlinAM. Prenatal exposure to maternal depression, neonatal methylation of human glucocorticoid receptor gene (NR3C1) and infant cortisol stress responses. Epigenetics3(2), 97–106 (2008).
   PubMed Web of Science ®Google Scholar
• Murthy VH , KrumholzHM , GrossCP. Participation in cancer clinical trials: race-, sex-, and age-based disparities. J. Am. Med. Assoc.291(22), 2720–2726 (2004).
   PubMed Web of Science ®Google Scholar
• Newman LA , RoffNK , WeinbergAD. Cancer clinical trials accrual: missed opportunities to address disparities and missed opportunities to improve outcomes for all. Ann. Surg. Oncol.15(7), 1818–1819 (2008).
   PubMed Web of Science ®Google Scholar
• Stewart JH , BertoniAG , StatenJL , LevineEA , GrossCP. Participation in surgical oncology clinical trials: gender-, race/ethnicity-, and age-based disparities. Ann. Surg. Oncol.14(12), 3328–3334 (2007).
   PubMed Web of Science ®Google Scholar
• Hamel LM , PennerLA , AlbrechtTL , HeathE , GwedeCK , EgglyS. Barriers to clinical trial enrollment in racial and ethnic minority patients with cancer. Cancer Control23(4), 327–337 (2016).
   PubMed Web of Science ®Google Scholar
• Brown SD , LeeK , SchoffmanDE , KingAC , CrawleyLM , KiernanM. Minority recruitment into clinical trials: experimental findings and practical implications. Contemp. Clin. Trials33(4), 620–623 (2012).
   PubMed Web of Science ®Google Scholar
• Webster GM , TeschkeK , JanssenPA. Recruitment of healthy first-trimester pregnant women: lessons from the chemicals, health & pregnancy study (CHirP). Matern. Child Health J.16(2), 430–438 (2012).
   PubMed Web of Science ®Google Scholar
• Smith YR , JohnsonAM , NewmanLA , GreeneA , JohnsonTRB , RogersJL. Perceptions of clinical research participation among African American women. J. Women’s Heal.16(3), 423–428 (2007).
   PubMed Web of Science ®Google Scholar
• Moher D , LiberatiA , TetzlaffJ , AltmanDG. PRISMA 2009 Flow Diagram. The PRISMA statement. PLoS Med.6(7), e1000097 (2009).
   PubMed Web of Science ®Google Scholar
• Ledyard R , BurrisHH. Disparities in racial and ethnic representation in perinatal epigenomic studies. PROSPERO: international prospective register of systematic reviews (2019) www.crd.yourk.ac.uk/prospero/.
   Google Scholar
• Bhavnani SK , DangB , KilaruVet al. Methylation differences reveal heterogeneity in preterm pathophysiology: results from bipartite network analyses. J. Perinat. Med.46, 509–521 (2018).
   PubMed Web of Science ®Google Scholar
• Parets SE , ConneelyKN , KilaruVet al. Fetal DNA methylation associates with early spontaneous preterm birth and gestational age. PLoS ONE8(6),e67489 (2013).
   PubMed Web of Science ®Google Scholar
• Wu Y , LinX , LimIYet al. Analysis of two birth tissues provides new insights into the epigenetic landscape of neonates born preterm. Clin. Epigenetics11(1), 26 (2019).
   PubMedGoogle Scholar
• Herzog EM , EgginkAJ , WillemsenSPet al. Early- and late-onset preeclampsia and the tissue-specific epigenome of the placenta and newborn. Placenta58, 122–132 (2017).
   PubMed Web of Science ®Google Scholar
• Lee H , JaffeAE , FeinbergJIet al. DNA methylation shows genome-wide association of NFIX, RAPGEF2 and MSRB3 with gestational age at birth. Int. J. Epidemiol.41(1),188–199 (2012).
   PubMed Web of Science ®Google Scholar
• Manuck TA , SmeesterL , MartinEMet al. Epigenetic regulation of the nitric oxide pathway, 17-α hydroxyprogesterone caproate, and recurrent preterm birth. Am. J. Perinatol.35(8),721–728 (2018).
   PubMed Web of Science ®Google Scholar
• Mitsuya K , SinghN , SoorannaSR , JohnsonMR , MyattL. Epigenetics of human myometrium: DNA methylation of genes encoding contraction-associated proteins in term and preterm labor. Biol. Reprod.90(5),1–8 (2014).
   Web of Science ®Google Scholar
• Cruickshank MN , OshlackA , ThedaCet al. Analysis of epigenetic changes in survivors of preterm birth reveals the effect of gestational age and evidence for a long term legacy. Genome Med5(10), 96 (2013).
   PubMedGoogle Scholar
• Parets SE , ConneelyKN , KilaruV , MenonR , SmithAK. DNA methylation provides insight into intergenerational risk for preterm birth in African Americans. Epigenetics10(9), 784–792 (2015).
   PubMed Web of Science ®Google Scholar
• Maccani JZJ , KoestlerDC , HousemanEA , MarsitCJ , KelseyKT. Placental DNA methylation alterations associated with maternal tobacco smoking at the RUNX3 gene are also associated with gestational age. Epigenomics5(6), 619–630 (2013).
   PubMed Web of Science ®Google Scholar
• Schuster J , UzunA , StabliaJ , SchorlC , MoriM , PadburyJF. Effect of prematurity on genome wide methylation in the placenta. BMC Med Genet20(1), 116 (2019).
   PubMedGoogle Scholar
• Schroeder JW , ConneelyKN , CubellsJCet al. Neonatal DNA methylation patterns associate with gestational age. Epigenetics6(12), 1498–1504 (2011).
   PubMed Web of Science ®Google Scholar
• Mani S , GhoshJ , LanYet al. Epigenetic changes in preterm birth placenta suggest a role for ADAMTS genes in spontaneous preterm birth. Hum. Mol. Genet.28(1), 84–95 (2019).
   PubMed Web of Science ®Google Scholar
• Salihu HM , DasR , MortonLet al. Racial differences in DNA-methylation of CpG sites within preterm-promoting genes and gene variants. Matern. Child Health J.20(8), 1680–1687 (2016).
   PubMed Web of Science ®Google Scholar
• Kim J , PitlickMM , ChristinePJet al. Genome-wide analysis of DNA methylation in human amnion. Sci. World J.2013, 678156 (2013).
   Google Scholar
• Hong X , SherwoodB , Ladd-AcostaCet al. Genome-wide DNA methylation associations with spontaneous preterm birth in US Blacks: findings in maternal and cord blood samples. Epigenetics13(2), 163–172 (2018).
   PubMed Web of Science ®Google Scholar
• Dhobale MV , PisalHR , MehendaleSS , JoshiSR. Differential expression of human placental neurotrophic factors in preterm and term deliveries. Int. J. Dev. Neurosci.31(8), 719–723 (2013).
   PubMed Web of Science ®Google Scholar
• Dhobale M , ChavanP , KulkarniA , MehendaleS , PisalH , JoshiS. Reduced folate, increased vitamin B12 and homocysteine concentrations in women delivering preterm. Ann. Nutr. Metab.61(1), 7–14 (2012).
   PubMed Web of Science ®Google Scholar
• Burris HH , JustAC , HavilandMJet al. Long noncoding RNA expression in the cervix mid-pregnancy is associated with the length of gestation at delivery. Epigenetics13(7), 742–750 (2018).
   PubMed Web of Science ®Google Scholar
• Luo X , PanJ , WangLet al. Epigenetic regulation of lncRNA connects ubiquitin-proteasome system with infection-inflammation in preterm births and preterm premature rupture of membranes. BMC Pregnancy Childbirth15, 35 (2015).
   PubMed Web of Science ®Google Scholar
• Luo X , ShiQ , GuYet al. LncRNA pathway involved in premature preterm rupture of membrane (PPROM): an epigenomic approach to study the pathogenesis of reproductive disorders. PLoS ONE (8(11), e79897 (2013).
   PubMed Web of Science ®Google Scholar
• Sanders AP , BurrisHH , JustACet al. MicroRNA expression in the cervix during pregnancy is associated with length of gestation. Epigenetics10(3), 221–228 (2015).
   PubMed Web of Science ®Google Scholar
• Sanders AP , GenningsC , SvenssonKet al. Bacterial and cytokine mixtures predict the length of gestation and are associated with miRNA expression in the cervix. Epigenomics9(1), 33–45 (2017).
   PubMed Web of Science ®Google Scholar
• Burris HH , Rifas-ShimanSL , BaccarelliAet al. Associations of long interspersed nuclear element-1 DNA methylation with preterm birth in a prospective cohort study. J. Dev. Orig. Heal. Dis.3(3), 173–181 (2012).
   PubMed Web of Science ®Google Scholar
• Walsh SW , ChumbleAA , WashingtonSL , ArcherKJ , SahingurSE , StraussJF. Increased expression of toll-like receptors 2 and 9 is associated with reduced DNA methylation in spontaneous preterm labor. J. Reprod. Immunol.121, 35–41 (2017).
   PubMed Web of Science ®Google Scholar
• Khot VV , Chavan-GautamP , MehendaleS , JoshiSR. Variable methylation potential in preterm placenta: implication for epigenetic programming of the offspring. Reprod. Sci.24(6), 891–901 (2017).
   PubMed Web of Science ®Google Scholar
• Provenzi L , CarliPD , FumagalliMet al. Very preterm birth is associated with PLAGL1 gene hypomethylation at birth and discharge. Epigenomics10(8), 1121–1130 (2018).
   PubMed Web of Science ®Google Scholar
• Behnia F , ParetsSE , KechichianTet al. Fetal DNA methylation of autism spectrum disorders candidate genes: association with spontaneous preterm birth. Am. J. Obstet. Gynecol. (212(4), 533.e1–533.e9 (2015).
   PubMed Web of Science ®Google Scholar
• Stünkel W , PanH , ChewSBet al. Transcriptome changes affecting Hedgehog and cytokine signalling in the umbilical cord: implications for disease risk. PLoS ONE7(7), e39744, (2012).
   PubMed Web of Science ®Google Scholar
• Tomlinson MS , BommaritoPA , MartinEMet al. Microorganisms in the human placenta are associated with altered CpG methylation of immune and inflammation-related genes. PLoS ONE12(12), e0188664, (2).
   PubMed Web of Science ®Google Scholar
• Tilley SK , MartinEM , SmeesterLet al. Placental CpG methylation of infants born extremely preterm predicts cognitive impairment later in life. PLoS ONE13(3), e0193271, (2018).
   PubMed Web of Science ®Google Scholar
• Santos HP Jr , BhattacharyaA , MartinEMet al. Epigenome-wide DNA methylation in placentas from preterm infants: association with maternal socioeconomic status. Epigenetics14(8), 751–765 (2019).
   PubMed Web of Science ®Google Scholar
• Knight AK , SmithAK , ConneelyKNet al. Relationship between epigenetic maturity and respiratory morbidity in preterm infants. J. Pediatr.198, 168–173.e2 (2018).
   PubMed Web of Science ®Google Scholar
• Konwar C , PriceEM , WangLQ , WilsonSL , TerryJ , RobinsonWP. DNA methylation profiling of acute chorioamnionitis-associated placentas and fetal membranes: insights into epigenetic variation in spontaneous preterm births. Epigenet. Chromatin11(1), 63 (2018).
   PubMedGoogle Scholar
• de Goede OM , LavoiePM , RobinsonWP. Cord blood hematopoietic cells from preterm infants display altered DNA methylation patterns. Clin. Epigenetics9, 39 (2017).
   PubMed Web of Science ®Google Scholar
• Hannon E , SchendelD , Ladd-AcostaCet al. Variable DNA methylation in neonates mediates the association between prenatal smoking and birth weight. Philos. Trans. R. Soc. B Biol. Sci.374, 20180120 (2019).
   PubMed Web of Science ®Google Scholar
• Bohlin J , HabergSE , MagnusPet al. Prediction of gestational age based on genome-wide differentially methylated regions. Genome Biol.17(1), 207 (2016).
   PubMedGoogle Scholar
• Simpkin AJ , SudermanM , GauntTRet al. Longitudinal analysis of DNA methylation associated with birth weight and gestational age. Hum. Mol. Genet.24(13), 3752–3763 (2015).
   PubMed Web of Science ®Google Scholar
• Wang XM , TianFY , FanLJ , XieCB , NiuZZ , ChenWQ. Comparison of DNA methylation profiles associated with spontaneous preterm birth in placenta and cord blood. BMC Med Genomics12(1), 1 (2019).
   PubMed Web of Science ®Google Scholar
• Fernando F , KeijserR , HennemanPet al. The idiopathic preterm delivery methylation profile in umbilical cord blood DNA. BMC Genomics16, 736 (2015).
   PubMed Web of Science ®Google Scholar
• Yoo JY , YouYA , KwonEJ , ParkMH , ShimS , KimYJ. Differential expression and methylation of integrin subunit alpha 11 and thrombospondin in the amnion of preterm birth. Obs. Gynecol Sci61(5), 565–574 (2018).
   PubMedGoogle Scholar
• Ching T , SongMA , TiirikainenMet al. Genome-wide hypermethylation coupled with promoter hypomethylation in the chorioamniotic membranes of early onset pre-eclampsia. Mol. Hum. Reprod.20(9), 885–904 (2014).
   PubMed Web of Science ®Google Scholar
• Goff SL , YoussefY , PekowPSet al. Successful strategies for practice-based recruitment of racial and ethnic minority pregnant women in a randomized controlled trial: the IDEAS for a healthy baby study. J. Racial Ethn. Heal. Disparities3(4), 731–737 (2016).
   PubMed Web of Science ®Google Scholar
• Yudell M , RobertsD , DeSalleR , TishkoffS. Science and society: taking race out of human genetics. Science351(6273), 564–565 (2016).
   PubMed Web of Science ®Google Scholar
• Barcelona de Mendoza V , WrightML , AgabaCet al. A systematic review of DNA methylation and preterm birth in African American women. Biol. Res. Nurs.19(3), 308–317 (2017).
   PubMed Web of Science ®Google Scholar
• World Population Review (2019) http://worldpopulationreview.com/.
   Google Scholar
• Office for National Statistics 2011 Census: ethnic group, local authorities in the United Kingdom (2013). https://webarchive.nationalarchives.gov.uk/20160105170152/
   Google Scholar