Seasonal distribution and activity of nitrogen-cycling bacteria in Bardawil Lagoon, Egypt

References

• Adams , V. 1990 . Water and wastewater examination manual. , Chelsea, Minnesota : Lewis Publishers .
   Google Scholar
• Alef , K and Kleiner , D . 1986 . Arginine ammonification, a simple method to estimate microbial activity potentials in soils . Soil Biology and Biochemistry , 18 : 233 – 235 .
   Web of Science ®Google Scholar
• Alexander , M. 1982 . “ Most Probable Number method for microbial populations ” . In Methods of soil analysis; Part 2 , Edited by: Black , C A . 815 – 820 . Madison : American Society of Agronomy .
   Google Scholar
• APHA (American Public Health Association) . 1985 . Standard methods for examination of water and wastewater , 37 – 44 . Washington, DC : APHA .
   Google Scholar
• Austin , B. 1988 . Marine microbiology , Cambridge : Cambridge University Press .
   Google Scholar
• Barnes , H and Folkard , A R . 1951 . The determination of nitrites . Analyst (London) , 76 : 599 – 603 .
   Web of Science ®Google Scholar
• Belser , L W and Mays , E L . 1982 . Use of nitrifier activity measurements to estimate the efficiency of viable nitrifier counts in soils and sediments . Applied and Environmental Microbiology , 43 : 945 – 948 .
   PubMed Web of Science ®Google Scholar
• Bodelier , P LE , Libochant , J A , Blom , C and Laanbroek , H J . 1996 . Dynamics of nitrification and denitrification in root-oxygenated sediments and adaptation of ammonia-oxidizing bacteria to low-oxygen or anoxic habitats . Applied and Environmental Microbiology , 62 : 4100 – 4107 .
   PubMed Web of Science ®Google Scholar
• Boon , P I and Cain , S . 1988 . Nitrogen cycling in salt-marsh and mangrove sediments at Western Port, Victoria . Australian Journal of Marine and Freshwater Research , 39 : 607 – 623 .
   Google Scholar
• Booth , R L and Lobring , L B . 1973 . “ Evaluation of the auto-analyzer II, a progress report ” . In Advances in automated analysis. 1972 Technicon International Congress , 7 Tarrytown, New York : Mediad Inc. .
   Google Scholar
• Caffrey , J M and Kemp , W M . 1992 . Influence of the submersed plant, Potamogeton perfoliatus L., on nitrogen cycling in estuarine sediments . Limnology and Oceanography , 37 : 1483 – 1495 .
   Web of Science ®Google Scholar
• Christensen , P B , Revsbech , N P and Sand-Jensen , K . 1994 . Microsensor analysis of oxygen in the rhizosphere of the aquatic macrophyte Littorella unifloru (L.) Ascherson . Plant Physiology , 105 : 847 – 852 .
   PubMedGoogle Scholar
• Cui , Z , Wang , P and Wang , O . 2005 . Application effect of most probable number (MPN) method in photosynthetic bacteria counting . Ying Yong Sheng TaiXue Bao , 6 : 1577 – 1580 .
   Google Scholar
• Francis , C A , Roberts , K J , Beman , M J , Santoro , A E and Oakley , B B . 2005 . Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean . Proceedings of the National Academy of Sciences of the United States of America , 102 : 14683 – 14688 .
   PubMed Web of Science ®Google Scholar
• Levy , Y. 1971 . “ Preliminary observation of nutrient cycle in the Bardawil Lagoon, northern Sinai ” . Jerusalem, , Israel : Geologic Survey . Report MG/71/1
   Google Scholar
• Liu , D and Luo , Q . 2002 . Distribution and role of denitrifying, nitrifying, nitrosation and ammonifying bacteria in East Lake . Huan Jing Ke Xue , 23 : 29 – 35 .
   PubMedGoogle Scholar
• Nydahl , F. 1976 . On the optimum conditions for the reduction of nitrate by cadmium . Talanta , 23 : 349
   PubMed Web of Science ®Google Scholar
• Pedersen , M E and Borum , J . 1992 . Nitrogen dynamics of eelgrass during late summer period of high growth and low nutrient availability . Marine Ecology Progress Series , 80 : 65 – 73 .
   Web of Science ®Google Scholar
• Pochon , J and Tardieux , P . 1962 . Techniques d’analyse en microbiologie du sol , 58 – 62 . St Mandé : Edition de Tourelle .
   Google Scholar
• Rabeh , S A , Azab , E A and Aly , M M . 2007 . Studies on bacterioplankton and inhibitory strains of aquatic actinomycetes in Lake Bardawil, Egypt . World Journal of Microbiology and Biotechnology , 23 : 167 – 176 .
   Google Scholar
• Risgaard-Petersen , N and Jensen , K . 1997 . Nitrification and denitrification in the rhizosphere of the aquatic macrophyte Lobelia dortmanna L . Limnology and Oceanography , 42 : 529 – 537 .
   Web of Science ®Google Scholar
• Rot 1 . 1973 . Salinity, oxygen and nutrients in Bardawil lagoon: report for 1972/1973 , Haifa, , Israel : Oceanography and Limnological Research Ltd .
   Google Scholar
• Sand-Jensen , K and Prahl , C . 1982 . Oxygen exchange with the lacunae and across leaves and roots of the submerged vascular macrophyte Lobelia dortmanna L . New Phytologist , 91 : 103 – 120 .
   Web of Science ®Google Scholar
• Schmidt , E L and Belser , L W . 1982 . “ Nitrifying bacteria ” . In Methods of soil analysis; Part 2 , Edited by: Black , C A . 1027 – 1041 . Madison : American Society of Agronomy .
   Google Scholar
• Short , E T and McRoy , C P . 1984 . Nitrogen uptake by leaves and roots of the seagrass Zostera marina L . Botanica Marina , 27 : 547 – 555 .
   Web of Science ®Google Scholar
• Siliem , TAE. 1989 . Chemical conditions of Bardawil lagoon; III -some limnological studies . Bulletin of the National Institute of Oceanography and Fisheries , 15 : 21 – 23 .
   Google Scholar
• Sloth , N P , Blackburn , T H , Hansen , L S , Risgaard-Petersen , N and Lomstein , B A . 1995 . Nitrogen cycling in sediments with different organic loading . Marine Ecology Progress Series , 116 : 163 – 170 .
   Web of Science ®Google Scholar
• Subbarao , NS. 1977 . Soil microorganisms and plant growth , 192 – 207 . New Delhi : Oxford and IBH Publishing .
   Google Scholar
• Urakawa , H , Maki , H , Kawabata , S , Fujiwara , T , Ando , H , Kawai , T , Hiwatari , T , Kohata , K and Watanabe , M . 2006 . Abundance and population structure of ammonia-oxidizing bacteria that inhabit canal sediments receiving effluents from municipal wastewater treatment plants . Applied and Environmental Microbiology , 72 : 6845 – 6850 .
   PubMedGoogle Scholar
• Voytek , M A and Ward , B B . 1995 . Detection of ammonium-oxidizing bacteria of the Beta-Subclass of the Class Proteobacteria in aquatic samples with PCR . Applied and Environmental Microbiology , 61 : 1444 – 1450 .
   PubMed Web of Science ®Google Scholar
• Ward , BB. 1996 . Nitrification and ammonification in aquatic systems . Life Support and Biosphere Science: International Journal of Earth Space , 3 : 25 – 29 .
   PubMedGoogle Scholar
• Ward , B B and Carlucci , A F . 1985 . Marine ammonia- and nitrite-oxidizing bacteria: serological diversity determined by immunofluorescence in culture and in the environment . Applied and Environmental Microbiology , 50 : 194 – 201 .
   PubMed Web of Science ®Google Scholar
• Ward , B B , Martino , D P , Diaz , M C and Joye , S B . 2000 . Analysis of ammonia-oxidizing bacteria from hypersaline Mono Lake, California, on the basis of 16S rRNA sequences . Applied and Environmental Microbiology , 66 : 2873 – 2881 .
   PubMedGoogle Scholar
• Wuchter , C , Abbas , B , Coolen , M JL , Herfort , L , van Bleijswijk , J , Timmers , P , Strous , M , Teira , E , Herndl , G J , Middelburg , J J , Schouten , S and Sinninghe Damste , JS. 2006 . Archaeal nitrification in the ocean . Proceedings of the National Academy of Sciences , 103 : 12317 – 12322 .
   PubMed Web of Science ®Google Scholar
• Yamamuro , M , Koike , I and lizumi , H. 1993 . Partitioning of the nitrogen stock in the vicinity of a Fijian seagrass bed dominated by Syringodium isoetifolium (Ascherson) Dandy . Australian Journal of Marine and Freshwater Research , 44 : 101 – 115 .
   Google Scholar
• Zehr , J P and Ward , B B . 2002 . Nitrogen cycling in the ocean: new perspectives on processes and paradigms . Applied and Environmental Microbiology , 68 : 1015 – 1024 .
   PubMed Web of Science ®Google Scholar