Differences in gene expression during sleep and wakefulness

References

• Steriade M, McCarley RW. Brainstem Control of Wakefulness and Sleep. Plenum Press, New York 1990
   Google Scholar
• Steriade M, Jones E G, McCormick D. The Thalamus. Elsevier, New York 1997
   Google Scholar
• Welsh D K, Logothetis D E, Meister M, Reppert SM. Individual neurons dissociated from rat suprachiasmatic nucleus express independently phased circadian firing rhythms. Neuron 1995; 14: 697–706
   PubMed Web of Science ®Google Scholar
• Pompeiano M, Tononi G. Changes in pontine muscarinic receptor binding during sleep-waking states in the rat. Neurosci Lett 1990; 109: 347–52
   Google Scholar
• Tononi G, Pompeiano M, Ronca-Testoni S. Noradrenergic receptor binding during sleep-waking states in the rat. Arch Ital Biol 1990; 128: 67–76
   Google Scholar
• Nunes Júnior GP, Tufik S, Nobrega JN. Autoradiographic analysis of D1 and D2 dopaminergic receptors in rat brain after paradoxical sleep deprivation. Brain Res Bull 1994; 34: 453–6
   Google Scholar
• Nunes Júnior GP, Tufik S, Nobrega JN. Decreased muscarinic receptor binding in rat brain after paradoxical sleep deprivation: an autoradiographic study. Brain Res 1994; 645: 247–52
   Google Scholar
• Jiménez-Anguiano A, García-García F, Mendoza-Ramírez JL, Durán-Vázquez A, Drucker-Colín R. Brain distribution of vasoactive intestinal peptide receptors following REM sleep deprivation. Brain Res 1996; 728: 37–46
   Google Scholar
• Hipólide DC, Tufik S, Raymond R, Nobrega JN. Heterogeneous effects of rapid eye movement sleep deprivation on binding to alpha- and beta-adrenergic receptor subtypes in rat brain. Neuroscience 1998; 86: 977–87
   Google Scholar
• Tsai L L, Bergmann B M, Perry B D, Rechtschaffen A. Effects of chronic total sleep deprivation on central noradrenergic receptors in rat brain. Brain Res 1993; 602: 221–7
   PubMed Web of Science ®Google Scholar
• Tsai L L, Bergmann B M, Perry B D, Rechtschaffen A. Effects of chronic sleep deprivation on central cholinergic receptors in rat brain. Brain Res 1994; 642: 95–103
   Google Scholar
• Ogasahara S, Taguchi Y, Wada H. Changes in the levels of cyclic nucleotides in rat brain during the sleep-wakefulness cycle. Brain Res 1981; 213: 163–71
   Google Scholar
• Perez E, Zamboni G, Amici R, Fadiga L, Parmeggiani PL. Ultradian and circadian changes in the cAMP concentration in the preoptic region of the rat. Brain Res 1991; 551: 132–5
   Google Scholar
• Mallick B N, Gulyani S. Alterations in synaptosomal calcium concentrations after rapid eye movement sleep deprivation in rats. Neuroscience 1996; 75: 729–36
   Google Scholar
• Cirelli C, Tononi G. Changes in anti-phosphoserine and anti-phosphothreonine antibody binding during the sleep-waking cycle and after lesions of the locus coeruleus. Sleep Res Online 1998; 1: 11–8
   Google Scholar
• Giuditta A, Rutigliano B, Vitale-Neugebauer A. Influence of synchronized sleep on the biosynthesis of RNA in two nuclear classes isolated from rabbit cerebral cortex. J Neurochem 1980; 35: 1259–66
   PubMedGoogle Scholar
• Panov A. RNA and protein content of brain stem cells after sleep deprivation. Riv Biol 1982; 75: 95–9
   Google Scholar
• Bobillier P, Sakai F, Seguin S, Jouvet M. Deprivation of paradoxical sleep and in vitro cerebral protein synthesis in the rat. Life Sci 1971; 10: 1349–57
   Web of Science ®Google Scholar
• Ramm P, Smith CT. Rates of cerebral protein synthesis are linked to slow wave sleep in the rat. Physiol Behav 1990; 48: 749–53
   PubMedGoogle Scholar
• Nakanishi H, Sun Y, Nakamura R K, Mori K, Ito M, Sura S. Positive correlations between cerebral protein synthesis rates and deep sleep in Macaca mulatta. Eur J Neurosci 1997; 9: 271–9
   PubMedGoogle Scholar
• Basheer R, Sherin J E, Saper C B, Morgan J I, McCarley R W, Shiromani PJ. Effects of sleep on wake-induced c-fos expression. J Neurosci 1997; 17: 9746–50
   Google Scholar
• Cirelli C, Pompeiano M, Tononi G. Fos-like immunoreactivity in the rat brain in spontaneous wakefulness and sleep. Arch Ital Biol 1993; 131: 327–30
   Google Scholar
• Cirelli C, Pompeiano M, Tononi G. Sleep deprivation and c-fos expression in the rat brain. J Sleep Res 1995; 4: 92–106
   Google Scholar
• Grassi-Zucconi G, Menegazzi M, De Prati A C, Bassetti A, Montagnese P, Mandile P. c-fos mRNA is spontaneously induced in the rat brain during the activity period of the circadian cycle. Eur J Neurosci 1993; 5: 1071–8
   Google Scholar
• Grassi-Zucconi G, Giuditta A, Mandile P, Chen S, Vescia S, Bentivoglio M. c-fos spontaneous expression during wakefulness is reversed during sleep in neuronal subsets of the rat cortex. J Physiol 1994; 88: 91–3
   Google Scholar
• Novak C M, Nunez AA. Daily rhythms in Fos activity in the rat ventrolateral preoptic area and midline thalamic nuclei. Am J Physiol 1998; 275: R1620–6
   Google Scholar
• O'Hara B F, Young K A, Watson F L, Heller H C, Kilduff TS. Immediate early gene expression in brain during sleep deprivation: preliminary observations. Sleep 1993; 16: 1–7
   Google Scholar
• Pompeiano M, Cirelli C, Tononi G. Effects of sleep deprivation on fos-like immunoreactivity in the rat brain. Arch Ital Biol 1992; 130: 325–35
   PubMedGoogle Scholar
• Pompeiano M, Cirelli C, Tononi G. Immediate-early genes in spontaneous wakefulness and sleep: expression of c-fos and NGFI-A mRNA and protein. J Sleep Res 1994; 3: 80–96
   PubMedGoogle Scholar
• Sherin J E, Shiromani P J, McCarley R W, Saper CB. Activation of ventrolateral preoptic neurons during sleep. Science 1996; 271: 216–9
   PubMed Web of Science ®Google Scholar
• O'Hara B F, Watson F L, Andretic R, Wiler S W, Young K A, Bitting L. Daily variation of CNS gene expression in nocturnal vs. diurnal rodents and in the developing rat brain. Mol Brdn Res 1997; 48: 73–86
   Google Scholar
• Henschel C, Davis FC. Expression of fos-like immunoreactivity in Syrian hamster hypothalamus in relation to behavioral state. Soc Neurosci Abstr 1996; 22: 1140
   Google Scholar
• Ledoux L, Sastre J P, Buda C, Luppi P H, Jouvet M. Alterations in c-fos expression after different experimental procedures of sleep deprivation in the cat. Brain Res 1996; 735: 108–18
   Google Scholar
• Roberts L A, Higgins M J, O'Shaughnessy C T, Stone T W, Morris BJ. Changes in hippocampal gene expression associated with the induction of long-term potentiation. Mol Brain Res 1996; 42: 123–7
   PubMedGoogle Scholar
• Pompeiano M, Arrighi P, Cirelli C, Tononi G. Calmodulin-dependent protein kinase II expression during wakefulness and sleep. Soc Neurosci Abstr 1995; 21: 1678
   Google Scholar
• Mackiewicz M, Sollars P J, Ogilvie M D, Pack AI. Modulation of IL-1 beta gene expression in the rat CNS during sleep deprivation. Neuroreport 1996; 7: 529–33
   PubMedGoogle Scholar
• Taishi P, Chen Z, Obal F, Jr., Hansen M K, Zhang J, Fang J. Sleep-associated changes in interleukin-1beta mRNA in the brain. J Interferon Cytokine Res 1998; 18: 793–8
   Google Scholar
• De Lecea L, Criado J, Calbet M, Danielson P E, Henriksen S J, Sutcliffe J G. Sleep regulates accumulation of the cortical neuropeptide cortistatin. Soc Neurosci Abstr 1998; 24: 1429
   Google Scholar
• Bova R, Micheli M R, Qualadrucci P, Zucconi GG. BDNF and trkB mRNAs oscillate in rat brain during the light-dark cycle. Mol Brdn Res 1998; 57: 321–4
   PubMedGoogle Scholar
• Peyron C, Wurts S, Srere H, Heller H, Edgar D, Kilduff T. mRNA level of brain-derived neurotrophic factor (BDNF) increases in several brain regions after sleep deprivation. Soc Neurosci Abstr 1998; 24: 1430
   Google Scholar
• Porkka-Heiskanen T, Smith S E, Taira T, Urban J H, Levine J E, Turek F W. Noradrenergic activity in rat brain during rapid eye movement sleep deprivation and rebound sleep. Am J Physiol 1995; 268: R1456–63
   Google Scholar
• Basheer R, Magner M, McCarley R W, Shiromani PJ. REM sleep deprivation increases the levels of tyrosine hydroxylase and norepinephrine transporter mRNA in the locus coeruleus. Mol Brdn Res 1998; 57: 235–40
   PubMedGoogle Scholar
• Toppila J, Alanko L, Asikainen M, Tobler I, Stenberg D, Porkka-Heiskanen T. Sleep deprivation increases somatostatin and growth hormone-releasing hormone messenger RNA in the rat hypothalamus. J Sleep Res 1997; 6: 171–8
   Google Scholar
• Gardi J, Obal F J, Fang J, Krueger J. Diurnal and sleep-deprivation induced changes in the GHRH contents of the rat hypothalamus. J Sleep Res 1998; 7: 97, (Suppl 2)
   Google Scholar
• Toppila J, Stenberg D, Alanko L, Asikainen M, Urban J H, Turek F W. REM sleep deprivation induces galanin gene expression in the rat brain. Neurosci Lett 1995; 183: 171–4
   PubMedGoogle Scholar
• Menegazzi M, Carcereri de Prati A, Grassi Zucconi G. Differential expression pattern of jun B and c-jun in the rat brain during the 24-h cycle. Neurosci Lett 1994; 182: 295–8
   Google Scholar
• Arrighi P, Cirelli C, Tononi G, Pompeiano M. Jun B expression during sleep-waking states and after sleep deprivation. Sleep Res 1996; 25: 457
   Google Scholar
• Pompeiano M, Cirelli C, Ronca-Testoni S, Tononi G. NGFI-A expression in the rat brain after sleep deprivation. Mol Brain Res 1997; 46: 143–53
   Google Scholar
• Rhyner T, Borbely A, Mallet J. Molecular cloning of forebrain mRNAs which are modulated by sleep deprivation. Eur J Neurosci 1990; 2: 1063–73
   Google Scholar
• Neuner-Jehle M, Rhyner T A, Borbely AA. Sleep deprivation differentially alters the mRNA and protein levels of neurogranin in rat brain. Brain Res 1995; 685: 143–53
   Google Scholar
• Neuner-Jehle M, Denizot J P, Borbély AA, Mallet J. Characterization and sleep deprivation-induced expression modulation of dendrin, a novel dendritic protein in rat brain neurons. J Neurosci Res 1996; 46: 138–51
   PubMedGoogle Scholar
• Pompeiano M, Cirelli C, Tononi G. Spontaneous wakefulness and sleep and the expression of type-II calmodulin kinase. Sleep Res 1994; 23: 509
   Google Scholar
• Cirelli C, Tononi G. Differences in gene expression between sleep and waking as revealed by mRNA differential display. Mol Brain Res 1998; 56: 293–305
   PubMedGoogle Scholar
• Cirelli C, Tononi G. Differences in brain gene expression between sleep and waking as revealed by mRNA differential display and cDNA microarray technology. J Sleep Res 1999, in press
   Google Scholar
• Cirelli C, Tononi G. Changes in gene expression in the cerebral cortex of rats after short- and long-term total sleep deprivation. Sleep, (in press)
   Google Scholar
• Toppila J, Asikainen M, Alanko L, Turek F W, Stenberg D, Porkka-Heiskanen T. The effect of REM sleep deprivation on somatostatin and growth hormone-releasing hormone gene expression in the rat hypothalamus. J Sleep Res 1996; 5: 115–22
   Google Scholar
• Milner R J, Sutcliffe JG. Gene expression in rat brain. Nucleic Acids Res 1983; 11: 5497–520
   PubMed Web of Science ®Google Scholar
• Gerendasy D D, Sutcliffe JG. RC3/neurogranin, a postsynaptic calpacitin for setting the response threshold to calcium influxes. Mol Neurobiol 1997; 15: 131–63
   PubMed Web of Science ®Google Scholar
• Okabe I, Bailey L C, Attree O, Srinivasan S, Perkel J M, Laurent B C. Cloning of human and bovine homologs of SNF2/SWI2: a global activator of transcription in yeast S. cerevisiae. Nucleic Acids Res 1992; 20: 4649–55
   PubMedGoogle Scholar
• Pazin M J, Kadonaga JT. SWI2/SNF2 and related proteins: ATP-driven motors that disrupt protein-DNA interactions. Cell 1997; 88: 737–40
   PubMed Web of Science ®Google Scholar
• Cirelli C, Pompeiano M, Tononi G. Neuronal gene expression in the waking state: a role for the locus coeruleus. Science 1996; 274: 1211–5
   PubMedGoogle Scholar
• Wong-Riley M TT, Mullen M A, Huang Z, Guyer C. Brain cytochrome oxidase subunit complementary DNAs: isolation, subcloning, sequencing, light and electron microscopic in situ hybridization of transcripts, and regulation by neuronal activity. Neuroscience 1997; 76: 1035–55
   Google Scholar
• Hevner R F, Wong-Riley M TT. Mitochondrial and nuclear gene expression for cytochrome oxidase subunits are disproportionately regulated by functional activity in neurons. J Neurosci 1993; 13: 1805–19
   PubMed Web of Science ®Google Scholar
• Nie F, Wong-Riley M TT. Mitochondrial- and nuclear-encoded subunits of cytochrome oxidase in neurons: differences in compartmental distribution, correlation with enzyme activity, and regulation by neuronal activity. J Comp Neurol 1996; 373: 139–55
   Google Scholar
• Maquet P. Sleep function(s) and cerebral metabolism. Behav Brain Res 1995; 69: 75–83
   PubMed Web of Science ®Google Scholar
• Williams J M, Thompson V L, Mason-Parker S E, Abraham W C, Tate WP. Synaptic activity-dependent modulation of mitochondrial gene expression in the rat hippocampus. Mol Brain Res 1998; 60: 50–6
   Google Scholar