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Original Article

Experience in shotgun sequencing a 134 kilobase pair DNA molecule

Pages 389-394 | Published online: 11 Jul 2009

References

  • Baer R., Bankier A. T., Biggin M. D., Deininger P. L., Farrell P. J., Gibson T. J., Hatfull C, Hudson G. S., Satchwell S. C., Seguin C, Tuffnell P. S., Barrell B. G. DNA sequence and expression of the B95–8 Epstein-Barr virus genome. Nature 1984; 310: 207–211
  • Bankier A. T., Barrell B. G. Sequencing single-stranded DNA using the chain-termination method. Nucleic Acids Sequencing: a Practical Approach, C. J. Howe, E. S. Ward. IRL Press, Oxford 1989; 37–78
  • Chee M. S., Bankier A. T., Beck S., Bohni R., Brown C M., Cerny R., Horsnell T., Hutchison I C.A., II, Kouzarides T., Martignetti J. A., Preddie E., Satchwell S. C., Tomlinson P., Weston K. M., Barrell B. G. Analysis of the protein-coding content of the sequence of human cytomegalovirus strain AD169. Current Topics in Microbiology and Immunology, J. K. Mc Dougall. Springer-Verlag, Berlin Heidelberg 1990; vol.154: 125–169
  • Chousterman S., Lacasa M., Sheldrick P. Physical map of the channel catfish virus genome: location of sites for restriction endonucleases FcoRI, HindIII, Hpal and Xbat. J. Virol. 1979; 31: 73–85
  • Davison A. J., Scott J. E. The complete DNA sequence of varicella-zoster virus. J. Gen. Virol. 1986; 67: 1759–1816
  • Goodheart C. R., Plummer G. The densities of her-pesviral DNAs. Prog. Med. Virol. 1975; 19: 324–352
  • Hiratsuka J., Shimada H., Whittier R., Ishibashi T., Sakamoto M., Mori M., Kondo C, Honji Y., Sun C. R., Meng B. Y., Li Y. Q., Kanno A., Nishizawa Y., Hirai A., Shinozaki K., Sugiura M. The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during evolution of the cereals. Mol. Cen. Genet. 1989; 217: 185–194
  • Joyce C M., Grindley N. D.F. Construction of a plasmid that overproduces the large proteolytic fragment (Klenow fragment) of DNA polymerase I of Escherichia coli. Proc. Nail. Acad. Sci. USA 1983; 80: 1830–1834
  • Mc Geoch D. J., Dalrymple M. A., Davison A. J., Dolan A., Frame M. C., Mc Nab D., Perry L. J., Scott J. E., Taylor P. The complete DNA sequence of the long unique region in the genome of herpes simplex virus type 1. J. Gen. Virol. 1988; 69: 1531–1574
  • Maxam A. M., Gilbert W. A new method for sequencing DNA. Proc. Natl. Acad. Sci. USA 1977; 74: 560–564
  • Messing J., Bankier A. T. The use of single-stranded DNA phage in DNA sequencing. Nucleic Acids Sequencing: a Practical Approach, C. J. Howe, E. S. Ward. IRL Press, Oxford 1989; 1–36
  • Ohyama K., Fukuzawa H., Kohchi T., Shirai H., Sano T., Sano S., Umesono K., Shiki Y., Takeuchi M., Chang Z., Aota S., Inokuchi H., Ozeki H. Chloroplast gene' organization deduced from complete sequence of liverwort Marchantia polymorpha chloroplast DNA. Nature 1986; 322: 572–574
  • Sanger F., Nicklen S., Coulson A. R. DNA sequencing with chain-terminating inhibitors. Proc Natl. Acad. Sci. USA 1977; 74: 5463–5467
  • Shinozaki K., Ohme M., Tanaka M., Wakasugi T., Hayasida N., Matsubayashi T., Zaita N., Chunwongse J., Obokata J., Yamaguchi-Shinozaki K., Ohto C, Torazawa K., Meng B. Y., Sugita M., Deno H., Kamogashira T., Yamada K., Kusuda J., Takaiwa F., Kato A., Tohdoh N., Shimada H., Sugiura M. The complete nucleotide sequence of tobacco chloroplast genome: its gene organization and expression. EMBO J. 1986; 5: 2043–2049
  • Smith V., Brown C M., Bankier A. T., Barrell B. G. Semiautomated preparation of DNA templates for large-scale sequencing projects. DNA sequence 1990; 1: 73–78
  • Staden R. Computer handling of DNA sequencing projects. Nucleic Acid and Protein Sequence Analysis: a Practical Approach, M. J. Bishop, C. J. Rawlings. IRL Press, Oxford 1987; 173–217
  • Sternberg N. Bacteriophage P1 cloning system for the isolation, amplification and recovery of DNA fragments as large as 100 kilobase pairs. Proc. Natl. Acad. Sci. USA 1990; 87: 103–107

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