Developmental competence in oocytes and cumulus cells: candidate genes and networks

References

• Adair, J.E., Maloney, S.C., Dement, G.A., Wertzler, K.J., Smerdon, M.J. and Reeves, R. (2007) High-mobility group A1 proteins inhibit expression of nucleotide excision repair factor xeroderma pigmentosum group A. Cancer Res 67:6044–6052.
   PubMed Web of Science ®Google Scholar
• Ali, A. and Sirard, M.A. (2005) Protein kinases influence bovine oocyte competence during short-term treatment with recombinant human follicle stimulating hormone. Reproduction 130:303–310.
   PubMed Web of Science ®Google Scholar
• Allen, C. and Reardon, W. (2005) Assisted reproduction technology and defects of genomic imprinting. BJOG 112:1589–1594.
   PubMedGoogle Scholar
• Allworth, A.E. and Albertini, D.F. (1993) Meiotic maturation in cultured bovine oocytes is accompanied by remodeling of the cumulus cell cytoskeleton. Dev Biol 158:101–112.
   PubMed Web of Science ®Google Scholar
• Assidi, M., Dufort, I., Ali, A., Hamel, M., Algriany, O., Dielemann, S., (2008) Identification of potential markers of oocyte competence expressed in bovine cumulus cells matured with follicle-stimulating hormone and/or phorbol myristate acetate in vitro. Biol Reprod 79:209–222.
   PubMed Web of Science ®Google Scholar
• Au, H.C., Seo, B.B., Matsuno-Yagi, A., Yagi, T. and Scheffler, I.E. (1999) The NDUFA1 gene product (MWFE protein) is essential for activity of complex I in mammalian mitochondria. Proc Natl Acad Sci U S A 96:4354–4359.
   PubMedGoogle Scholar
• Barrett, S.L. and Albertini, D.F. (2010) Cumulus cell contact during oocyte maturation in mice regulates meiotic spindle positioning and enhances developmental competence. J Assist Reprod Genet 27:29–39.
   PubMedGoogle Scholar
• Barrett, T., Troup, D.B., Wilhite, S.E., Ledoux, P., Rudnev, D., Evangelista, C., (2009) NCBI GEO: archive for high-throughput functional genomic data. Nucleic Acids Res 37:D885–890.
   PubMed Web of Science ®Google Scholar
• Bellone, M., Zuccotti, M., Redi, C.A. and Garagna, S. (2009) The position of the germinal vesicle and the chromatin organization together provide a marker of the developmental competence of mouse antral oocytes. Reproduction 138:639–643.
   PubMedGoogle Scholar
• Bettegowda, A., Patel, O.V., Lee, K.B., Park, K.E., Salem, M., Yao, J., (2008) Identification of novel bovine cumulus cell molecular markers predictive of oocyte competence: functional and diagnostic implications. Biol Reprod 79:301–309.
   PubMed Web of Science ®Google Scholar
• Bettegowda, A. and Smith, G.W. (2007) Mechanisms of maternal mRNA regulation: implications for mammalian early embryonic development. Front Biosci 12:3713–3726.
   PubMedGoogle Scholar
• Bierkamp, C., Luxey, M., Metchat, A., Audouard, C., Dumollard, R. and Christians, E. (2010) Lack of maternal Heat Shock Factor 1 results in multiple cellular and developmental defects, including mitochondrial damage and altered redox homeostasis, and leads to reduced survival of mammalian oocytes and embryos. Dev Biol 339:338–353.
   PubMedGoogle Scholar
• Blondin, P., Coenen, K., Guilbault, L.A. and Sirard, M.A. (1996) Superovulation can reduce the developmental competence of bovine embryos. Theriogenology 46:1191–1203.
   PubMed Web of Science ®Google Scholar
• Bouniol-Baly, C., Hamraoui, L., Guibert, J., Beaujean, N., Szollosi, M.S. and Debey, P. (1999) Differential transcriptional activity associated with chromatin configuration in fully grown mouse germinal vesicle oocytes. Biol Reprod 60:580–587.
   PubMed Web of Science ®Google Scholar
• Brackett, B.G. and Zuelke, K.A. (1993) Analysis of factors involved in the in vitro production of bovine embryos. Theriogenology 239:43–64.
   Google Scholar
• Cahill, L.S. (2000) Social ethics of embryo and stem cell research. Womens Health Issues 10:131–135.
   PubMedGoogle Scholar
• Cicirelli, M.F., Tonks, N.K., Diltz, C.D., Weiel, J.E., Fischer, E.H. and Krebs, E.G. (1990) Microinjection of a protein-tyrosine-phosphatase inhibits insulin action in Xenopus oocytes. Proc Natl Acad Sci U S A 87:5514–5518.
   PubMed Web of Science ®Google Scholar
• Crozet, N. (1989) Nucleolar structure and RNA synthesis in mammalian oocytes. J Reprod Fertil Suppl 38:9–16.
   PubMedGoogle Scholar
• Datta, B. (2000) MAPs and POEP of the roads from prokaryotic to eukaryotic kingdoms. Biochimie 82:95–107.
   PubMedGoogle Scholar
• De Matos, D.G., Tran, C.A., Kagan, D., Nataraja, S.G. and Palmer, S. (2008) Interleukin-6 (IL-6) Induces Cumulus Expansion and Improves Oocyte Competence When Present During Mouse In Vitro Oocyte Maturation (IVM). . Biology of Reproduction 78:
   Google Scholar
• de Mouzon, J., Lancaster, P., Nygren, K.G., Sullivan, E., Zegers-Hochschild, F., Mansour, R., (2009) World collaborative report on Assisted Reproductive Technology, 2002. Hum Reprod 24:2310–2320.
   PubMed Web of Science ®Google Scholar
• Deblandre, G.A., Marinx, O.P., Evans, S.S., Majjaj, S., Leo, O., Caput, D., (1995) Expression cloning of an interferon-inducible 17-kDa membrane protein implicated in the control of cell growth. J Biol Chem 270:23860–23866.
   PubMed Web of Science ®Google Scholar
• Dominko, T., First, N.L. (1997) Timing of meiotic progression in bovine oocytes and its effect on early embryo development. Mol Reprod Dev 456–467.
   PubMedGoogle Scholar
• Fair, T. (2010) Mammalian oocyte development: checkpoints for competence. Reprod Fertil Dev 22:13–20.
   PubMedGoogle Scholar
• Farnet, C.M. and Bushman, F.D. (1997) HIV-1 cDNA integration: requirement of HMG I(Y) protein for function of preintegration complexes in vitro. Cell 88:483–492.
   PubMed Web of Science ®Google Scholar
• Fedele, M., Pierantoni, G.M., Berlingieri, M.T., Battista, S., Baldassarre, G., Munshi, N., (2001) Overexpression of proteins HMGA1 induces cell cycle deregulation and apoptosis in normal rat thyroid cells. Cancer Res 61:4583–4590.
   PubMed Web of Science ®Google Scholar
• Garrick, D., Sharpe, J.A., Arkell, R., Dobbie, L., Smith, A.J., Wood, W.G., (2006) Loss of Atrx affects trophoblast development and the pattern of X-inactivation in extraembryonic tissues. PLoS Genet 2:e58.
   PubMed Web of Science ®Google Scholar
• Gasca, S., Reyftmann, L., Pellestor, F., Reme, T., Assou, S., Anahory, T., (2008) Total fertilization failure and molecular abnormalities in metaphase II oocytes. Reprod Biomed Online 17:772–781.
   PubMedGoogle Scholar
• Gordon, I., andLu, H.K. (1990) Production of embryos in vitro and its impact on livestock production. Theriogenology 33:77–78.
   Web of Science ®Google Scholar
• Greenbaum, M.P., Iwamori, N., Agno, J.E. and Matzuk, M.M. (2009) Mouse TEX14 is required for embryonic germ cell intercellular bridges but not female fertility. Biol Reprod 80:449–457.
   PubMedGoogle Scholar
• Hahn, K.L., Johnson, J., Beres, B.J., Howard, S. and Wilson-Rawls, J. (2005) Lunatic fringe null female mice are infertile due to defects in meiotic maturation. Development 132:817–828.
   PubMed Web of Science ®Google Scholar
• Hatano, S.Y., Tada, M., Kimura, H., Yamaguchi, S., Kono, T., Nakano, T., (2005) Pluripotential competence of cells associated with Nanog activity. Mech Dev 122:67–79.
   PubMed Web of Science ®Google Scholar
• Herdegen, T. and Leah, J.D. (1998) Inducible and constitutive transcription factors in the mammalian nervous system: control of gene expression by Jun, Fos and Krox, and CREB/ATF proteins. Brain Res Brain Res Rev 28:370–490.
   PubMed Web of Science ®Google Scholar
• Hussein, T.S., Froiland, D.A., Amato, F., Thompson, J.G. and Gilchrist, R.B. (2005) Oocytes prevent cumulus cell apoptosis by maintaining a morphogenic paracrine gradient of bone morphogenetic proteins. J Cell Sci 118:5257–5268.
   PubMed Web of Science ®Google Scholar
• Johnson, J., Espinoza, T., McGaughey, R.W., Rawls, A. and Wilson-Rawls, J. (2001) Notch pathway genes are expressed in mammalian ovarian follicles. Mech Dev 109:355–361.
   PubMed Web of Science ®Google Scholar
• Kenigsberg, S., Bentov, Y., Chalifa-Caspi, V., Potashnik, G., Ofir, R. and Birk, O.S. (2009) Gene expression microarray profiles of cumulus cells in lean and overweight-obese polycystic ovary syndrome patients. Mol Hum Reprod 15:89–103.
   PubMed Web of Science ®Google Scholar
• Kernohan, K.D., Jiang, Y., Tremblay, D.C., Bonvissuto, A.C., Eubanks, J.H., Mann, M.R., (2010) ATRX partners with cohesin and MeCP2 and contributes to developmental silencing of imprinted genes in the brain. Dev Cell 18:191–202.
   PubMedGoogle Scholar
• Kocabas, A.M., Crosby, J., Ross, P.J., Otu, H.H., Beyhan, Z., Can, H., (2006) The transcriptome of human oocytes. Proc Natl Acad Sci U S A 103:14027–14032.
   Google Scholar
• Kues, W.A., Sudheer, S., Herrmann, D., Carnwath, J.W., Havlicek, V., Besenfelder, U., (2008) Genome-wide expression profiling reveals distinct clusters of transcriptional regulation during bovine preimplantation development in vivo. Proc Natl Acad Sci U S A 105:19768–19773.
   PubMed Web of Science ®Google Scholar
• Ledee, N., Lombroso, R., Lombardelli, L., Selva, J., Dubanchet, S., Chaouat, G., (2008) Cytokines and chemokines in follicular fluids and potential of the corresponding embryo: the role of granulocyte colony-stimulating factor. Hum Reprod 23:2001–2009.
   PubMed Web of Science ®Google Scholar
• Lee, Y.S., Latham, K.E. and Vandevoort, C.A. (2008) Effects of in vitro maturation on gene expression in rhesus monkey oocytes. Physiol Genomics 35: 145–158.
   PubMedGoogle Scholar
• Li, C. and Hung Wong, W. (2001) Model-based analysis of oligonucleotide arrays: model validation, design issues and standard error application. Genome Biol 2: RESEARCH0032.
   Google Scholar
• Liu, C., Calogero, A., Ragona, G., Adamson, E. and Mercola, D. (1996) EGR-1, the reluctant suppression factor: EGR-1 is known to function in the regulation of growth, differentiation, and also has significant tumor suppressor activity and a mechanism involving the induction of TGF-beta1 is postulated to account for this suppressor activity. Crit Rev Oncog 7:101–125.
   PubMedGoogle Scholar
• Lucy, M.C. (2001) Reproductive loss in high-producing dairy cattle: where will it end? J Dairy Sci 84:1277–1293.
   PubMed Web of Science ®Google Scholar
• Macklin, R. (2000) Ethics, politics, and human embryo stem cell research. Womens Health Issues 10:111–115.
   PubMedGoogle Scholar
• Malhi, P.S., Adams, G.P., Mapletoft, R.J. and Singh, J. (2007) Oocyte developmental competence in a bovine model of reproductive aging. Reproduction 134:233–239.
   PubMedGoogle Scholar
• Mamo, S., Carter, F., Lonergan, P., Leal, C.L., Al Naib, A., McGettigan, P., (2011) Sequential analysis of global gene expression profiles in immature and in vitro matured bovine oocytes: potential molecular markers of oocyte maturation. BMC Genomics 12:151.
   PubMedGoogle Scholar
• Marangos, P., Verschuren, E.W., Chen, R., Jackson, P.K. and Carroll, J. (2007) Prophase I arrest and progression to metaphase I in mouse oocytes are controlled by Emi1-dependent regulation of APC(Cdh1). J Cell Biol 176:65–75.
   PubMedGoogle Scholar
• Market-Velker, B.A., Zhang, L., Magri, L.S., Bonvissuto, A.C. and Mann, M.R. (2010) Dual effects of superovulation: loss of maternal and paternal imprinted methylation in a dose-dependent manner. Hum Mol Genet 19:36–51.
   PubMed Web of Science ®Google Scholar
• Masui, Y. and Clarke, H.J. (1979) Oocyte maturation. Int Rev Cytol 57:185–282.
   PubMedGoogle Scholar
• Miki, H., Sasaki, T., Takai, Y. and Takenawa, T. (1998) Induction of filopodium formation by a WASP-related actin-depolymerizing protein N-WASP. Nature 391:93–96.
   PubMed Web of Science ®Google Scholar
• Oliveros, J.C. (2007) An interactive tool for comparing lists with Venn Diagrams. http://bioinfogp.cnb.csic.es/tools/venny/index.html.
   Google Scholar
• Pan, H., Ma, P., Zhu, W. and Schultz, R.M. (2008) Age-associated increase in aneuploidy and changes in gene expression in mouse eggs. Dev Biol 316:397–407.
   Google Scholar
• Picketts, D.J., Tastan, A.O., Higgs, D.R. and Gibbons, R.J. (1998) Comparison of the human and murine ATRX gene identifies highly conserved, functionally important domains. Mamm Genome 9:400–403.
   PubMedGoogle Scholar
• Reimann, J.D. and Jackson, P.K. (2002) Emi1 is required for cytostatic factor arrest in vertebrate eggs. Nature 416:850–854.
   PubMed Web of Science ®Google Scholar
• Richards, J.S., Liu, Z. and Shimada, M. (2008) Immune-like mechanisms in ovulation. Trends Endocrinol Metab 19:191–196.
   PubMed Web of Science ®Google Scholar
• Richter, K., Hendershot, L.M. and Freeman, B.C. (2007) The cellular world according to Hsp90. Nat Struct Mol Biol 14:90–94.
   PubMed Web of Science ®Google Scholar
• Rizk, B. and Smitz, J. (1992) Ovarian hyperstimulation syndrome after superovulation using GnRH agonists for IVF and related procedures. Hum Reprod 7:320–327.
   PubMedGoogle Scholar
• Robitaille, H., Proulx, R., Robitaille, K., Blouin, R. and Germain, L. (2005) The mitogen-activated protein kinase kinase kinase dual leucine zipper-bearing kinase (DLK) acts as a key regulator of keratinocyte terminal differentiation. J Biol Chem 280:12732–12741.
   PubMed Web of Science ®Google Scholar
• Seth, R.B., Sun, L. and Chen, Z.J. (2006) Antiviral innate immunity pathways. Cell Res 16:141–147.
   PubMed Web of Science ®Google Scholar
• Shah, K., Sivapalan, G., Gibbons, N., Tempest, H. and Griffin, D.K. (2003) The genetic basis of infertility. Reproduction 126:13–25.
   PubMed Web of Science ®Google Scholar
• Shimada, M., Hernandez-Gonzalez, I., Gonzalez-Robanya, I. and Richards, J.S. (2006) Induced expression of pattern recognition receptors in cumulus oocyte complexes: novel evidence for innate immune-like functions during ovulation. Mol Endocrinol 20:3228–3239.
   PubMed Web of Science ®Google Scholar
• Shyu, L.F., Sun, J., Chung, H.M., Huang, Y.C. and Deng, W.M. (2009) Notch signaling and developmental cell-cycle arrest in Drosophila polar follicle cells. Mol Biol Cell 20:5064–5073.
   PubMedGoogle Scholar
• Sirard, M.A. and Coenen, K. (2006) In vitro maturation and embryo production in cattle. Methods Mol Biol 348:35–42.
   PubMedGoogle Scholar
• Squires, E.L., Brubaker, J.K., McCue, P.M. and Pickett, B.W. (1998) Effect of sperm number and frequency of insemination on fertility of mares inseminated with cooled semen. Theriogenology 49:743–749.
   PubMedGoogle Scholar
• Su, Y.Q., Sugiura, K., Woo, Y., Wigglesworth, K., Kamdar, S., Affourtit, J., (2007) Selective degradation of transcripts during meiotic maturation of mouse oocytes. Dev Biol 302:104–117.
   PubMed Web of Science ®Google Scholar
• Tatone, C. (2008) Oocyte senescence: a firm link to age-related female subfertility. Gynecol Endocrinol 24:59–63.
   PubMed Web of Science ®Google Scholar
• Udayakumar, T.S., Belakavadi, M., Choi, K.H., Pandey, P.K. and Fondell, J.D. (2006) Regulation of Aurora-A kinase gene expression via GABP recruitment of TRAP220/MED1. J Biol Chem 281:14691–14699.
   PubMed Web of Science ®Google Scholar
• Vallee, M., Robert, C., Methot, S., Palin, M.F. and Sirard, M.A. (2006) Cross-species hybridizations on a multi-species cDNA microarray to identify evolutionarily conserved genes expressed in oocytes. BMC Genomics 7:113.
   PubMedGoogle Scholar
• van Montfoort, A.P., Geraedts, J.P., Dumoulin, J.C., Stassen, A.P., Evers, J.L. and Ayoubi, T.A. (2008) Differential gene expression in cumulus cells as a prognostic indicator of embryo viability: a microarray analysis. Mol Hum Reprod 14:157–168.
   PubMedGoogle Scholar
• Yuan, Y.Q., Van Soom, A., Leroy, J.L., Dewulf, J., Van Zeveren, A., de Kruif, A., (2005) Apoptosis in cumulus cells, but not in oocytes, may influence bovine embryonic developmental competence. Theriogenology 63:2147–2163.
   PubMed Web of Science ®Google Scholar
• Zhao, S.Y., Qiao, J., Chen, Y.J., Liu, P., Li, J. and Yan, J. (2010) Expression of growth differentiation factor-9 and bone morphogenetic protein-15 in oocytes and cumulus granulosa cells of patients with polycystic ovary syndrome. Fertil Steril 94:261–267.
   PubMedGoogle Scholar
• Zheng, P., Vassena, R. and Latham, K. (2006) Expression and downregulation of WNT signaling pathway genes in rhesus monkey oocytes and embryos. Mol Reprod Dev 73:667–677.
   PubMedGoogle Scholar
• Zheng, Z., Zheng, H. and Yan, W. (2007) Fank1 is a testis-specific gene encoding a nuclear protein exclusively expressed during the transition from the meiotic to the haploid phase of spermatogenesis. Gene Expr Patterns 7:777–783.
   PubMedGoogle Scholar
• Zuccotti, M., Merico, V., Sacchi, L., Bellone, M., Brink, T.C., Stefanelli, M., (2009) Oct-4 regulates the expression of Stella and Foxj2 at the Nanog locus: implications for the developmental competence of mouse oocytes. Hum Reprod 24:2225–2237.
   Google Scholar