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Mitochondrial DNA
The Journal of DNA Mapping, Sequencing, and Analysis
Volume 24, 2013 - Issue 4
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Full Length Research Papers

Accumulation of mutations over the complete mitochondrial genome in tobacco-related oral cancer from northeast India

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Pages 432-439 | Received 14 Sep 2012, Accepted 17 Dec 2012, Published online: 25 Jan 2013

References

  • Bensch KG, Mott JL, Chang SW, Hansen PA, Moxley MA, Chambers KT, de Graaf W, Zassenhaus HP, Corbett JA. 2009. Selective mtDNA mutation accumulation results in beta-cell apoptosis and diabetes development. Am J Physiol Endocrinol Metab. 296 4: E672–E680.
  • Bi R, Li WL, Chen MQ, Zhu Z, Yao YG. 2011. Rapid identification of mtDNA somatic mutations in gastric cancer tissues based on the mtDNA phylogeny. Mutat Res. 709-710:15–20.
  • Bragoszewski P, Kupryjanczyk J, Bartnik E, Rachinger A, Ostrowski J. 2008. Limited clinical relevance of mitochondrial DNA mutation and gene expression analyses in ovarian cancer. BMC Cancer. 8:292.
  • Carew JS, Zhou Y, Albitar M, Carew JD, Keating MJ, Huang P. 2003. Mitochondrial DNA mutations in primary leukemia cells after chemotherapy: Clinical significance and therapeutic implications. Leukemia. 17 8: 1437–1447.
  • Chang SC, Lin PC, Yang SH, Wang HS, Liang WY, Lin JK. 2009. Mitochondrial d-loop mutation is a common event in colorectal cancers with p53 mutations. Int J Colorectal Dis. 24 6: 623–628.
  • Chen JZ, Gokden N, Greene GF, Mukunyadzi P, Kadlubar FF. 2002. Extensive somatic mitochondrial mutations in primary prostate cancer using laser capture microdissection. Cancer Res. 62 22: 6470–6474.
  • Coskun PE, Beal MF, Wallace DC. 2004. Alzheimers brains harbor somatic mtDNA control-region mutations that suppress mitochondrial transcription and replication. Proc Natl Acad Sci USA. 101 29: 10726–10731.
  • Dasgupta S, Soudry E, Mukhopadhyay N, Shao C, Yee J, Lam S, Lam W, Zhang W, Gazdar AF, Fisher PB, Sidransky D. 2012. Mitochondrial DNA mutations in respiratory complex-I in never-smoker lung cancer patients contribute to lung cancer progression and associated with EGFR gene mutation. J Cell Physiol. 227 6: 2451–2460.
  • Edwards NC, Hing ZA, Perry A, Blaisdell A, Kopelman DB, Fathke R, Plum W, Newell J, Allen CE, S G, Shapiro A, Okunji C, Kosti I, Shomron N, Grigoryan V, Przytycka TM, Sauna ZE, Salari R, Mandel-Gutfreund Y, Komar AA, Kimchi-Sarfaty C. 2012. Characterization of coding synonymous and non-synonymous variants in ADAMTS13 using ex vivo and in silico approaches. PLoS ONE. 7 6: e38864.
  • Finkel T. 2000. Redox-dependent signal transduction. FEBS Lett. 476 1-2: 52–54.
  • Finkel T. 2003. Oxidant signals and oxidative stress. Curr Opin Cell Biol. 15 2: 247–254.
  • Fliss MS, Usadel H, Caballero OL, Wu L, Buta MR, Eleff SM, Jen J, Sidransky D. 2000. Facile detection of mitochondrial DNA mutations in tumors and bodily fluids. Science. 287 5460: 2017–2019.
  • Ghosh SK, Mondal R. 2012. Quick diagnosis of female genital tuberculosis using multiplex fast polymerase chain reaction in Southern Assam, India. Int J Gynaecol Obstet. 118 1: 72–73.
  • Gupta PC, Ray CS. 2003. Smokeless tobacco and health in India and South Asia. Respirology. 8 4: 419–431.
  • Ha PK, Tong BC, Westra WH, Sanchez-Cespedes M, Parrella P, Zahurak M, Sidransky D, Califano JA. 2002. Mitochondrial C-tract alteration in premalignant lesions of the head and neck: A marker for progression and clonal proliferation. Clin Cancer Res. 8 7: 2260–2265.
  • Ihsan R, Devi TR, Yadav DS, Mishra AK, Sharma J, Zomawia E, Verma Y, Phukan R, Mahanta J, Kataki AC, Kapur S, Saxena S. 2011. Investigation on the role of p53 codon 72 polymorphism and interactions with tobacco, betel quid, and alcohol in susceptibility to cancers in a high-risk population from North East India. DNA Cell Biol. 30 3: 163–171.
  • Jiang WW, Califano J. 2004. Mitochondrial mutations and nasopharyngeal carcinoma. Cancer Biol Ther. 3 12: 1275–1276.
  • Kimchi-Sarfaty C, Oh JM, Kim IW, Sauna ZE, Calcagno AM, Ambudkar SV, Gottesman MM. 2007. A “silent” polymorphism in the MDR1 gene changes substrate specificity. Science. 315 5811: 525–528.
  • Kirches E, Krause G, Warich-Kirches M, Weis S, Schneider T, Meyer-Puttlitz B, Mawrin C, Dietzmann K. 2001. High frequency of mitochondrial DNA mutations in glioblastoma multiforme identified by direct sequence comparison to blood samples. Int J Cancer. 93 4: 534–538.
  • Komar AA. 2007. Genetics. SNPs, silent but not invisible. Science. 315 5811: 466–467.
  • Kumimoto H, Yamane Y, Nishimoto Y, Fukami H, Shinoda M, Hatooka S, Ishizaki K. 2004. Frequent somatic mutations of mitochondrial DNA in esophageal squamous cell carcinoma. Int J Cancer. 108 2: 228–231.
  • Kuruvilla J. 2008. Utilizing dental colleges for the eradication of oral cancer in India. Indian J Dent Res. 19 4: 349–353.
  • Lievre A, Blons H, Houllier AM, Laccourreye O, Brasnu D, Beaune P, Laurent-Puig P. 2006. Clinicopathological significance of mitochondrial d-loop mutations in head and neck carcinoma. Br J Cancer. 94 5: 692–697.
  • Lemarie A, Grimm S. 2011. Mitochondrial respiratory chain complexes: Apoptosis sensors mutated in cancer?. Oncogene. 30 38: 3985–4003.
  • Liu VW, Shi HH, Cheung AN, Chiu PM, Leung TW, Nagley P, Wong LC, Ngan HY. 2001. High incidence of somatic mitochondrial DNA mutations in human ovarian carcinomas. Cancer Res. 61 16: 5998–6001.
  • Mambo E, Gao X, Cohen Y, Guo Z, Talalay P, Sidransky D. 2003. Electrophile and oxidant damage of mitochondrial DNA leading to rapid evolution of homoplasmic mutations. Proc Natl Acad Sci USA. 100 4: 1838–1843.
  • Maximo V, Soares P, Lima J, Cameselle-Teijeiro J, Sobrinho-Simoes M. 2002. Mitochondrial DNA somatic mutations (point mutations and large deletions) and mitochondrial DNA variants in human thyroid pathology: A study with emphasis on Hurthle cell tumors. Am J Pathol. 160 5: 1857–1865.
  • Papeta N, Zheng Z, Schon EA, Brosel S, Altintas MM, Nasr SH, Reiser J, D'Agati VD, Gharavi AG. 2010. Prkdc participates in mitochondrial genome maintenance and prevents Adriamycin-induced nephropathy in mice. J Clin Invest. 120 11: 4055–4064.
  • Park JS, Sharma LK, Li H, Xiang R, Holstein D, Wu J, Lechleiter J, Naylor SL, Deng JJ, Lu J, Bai Y. 2009. A heteroplasmic, not homoplasmic, mitochondrial DNA mutation promotes tumorigenesis via alteration in reactive oxygen species generation and apoptosis. Hum Mol Genet. 18 9: 1578–1589.
  • Peterson LA. 2010. Formation, repair, and genotoxic properties of bulky DNA adducts formed from tobacco-specific nitrosamines. J Nucleic Acids. 2010.
  • Phukan RK, Chetia CK, Ali MS, Mahanta J. 2001. Role of dietary habits in the development of esophageal cancer in Assam, the north-eastern region of India. Nutr Cancer. 39 2: 204–209.
  • Prior SL, Griffiths AP, Baxter JM, Baxter PW, Hodder SC, Silvester KC, Lewis PD. 2006. Mitochondrial DNA mutations in oral squamous cell carcinoma. Carcinogenesis. 27 5: 945–950.
  • Ricci JE, Waterhouse N, Green DR. 2003. Mitochondrial functions during cell death, a complex (I-V) dilemma. Cell Death Differ. 10 5: 488–492.
  • Rothberg JM, Hinz W, Rearick TM, Schultz J, Mileski W, Davey M, Leamon JH, Johnson K, Milgrew MJ, Edwards M, Hoon J, Simons JF, Marran D, Myers JW, Davidson JF, Branting A, Nobile JR, Puc BP, Light D, Clark TA, Huber M, Branciforte JT, Stoner IB, Cawley SE, Lyons M, Fu Y, Homer N, Sedova M, Miao X, Reed B, Sabina J, Feierstein E, Schorn M, Alanjary M, Dimalanta E, Dressman D, Kasinskas R, Sokolsky T, Fidanza JA, Namsaraev E, McKernan KJ, Williams A, Roth GT, Bustillo J. 2011. An integrated semiconductor device enabling non-optical genome sequencing. Nature. 475 7356: 348–352.
  • Sanchez-Cespedes M, Parrella P, Nomoto S, Cohen D, Xiao Y, Esteller M, Jeronimo C, Jordan RC, Nicol T, Koch WM, Schoenberg M, Mazzarelli P, Fazio VM, Sidransky D. 2001. Identification of a mononucleotide repeat as a major target for mitochondrial DNA alterations in human tumors. Cancer Res. 61 19: 7015–7019.
  • Shen L, Wei J, Chen T, He J, Qu J, He X, Jiang L, Qu Y, Fang H, Chen G, Lu J, Bai Y. 2011. Evaluating mitochondrial DNA in patients with breast cancer and benign breast disease. J Cancer Res Clin Oncol. 137 4: 669–675.
  • Shin MG, Levin BC, Kim HJ, Kim HR, Lee IK, Cho D, Kee SJ, Shin JH, Suh SP, Ryang DW. 2006. Profiling of length heteroplasmies in the human mitochondrial DNA control regions from blood cells in the Korean population. Electrophoresis. 27 7: 1331–1340.
  • Singh KK, Kulawiec M. 2009. Mitochondrial DNA polymorphism and risk of cancer. Methods Mol Biol. 471:291–303.
  • Staniek K, Gille L, Kozlov AV, Nohl H. 2002. Mitochondrial superoxide radical formation is controlled by electron bifurcation to the high and low potential pathways. Free Radic Res. 36 4: 381–387.
  • Tseng LM, Yin PH, Chi CW, Hsu CY, Wu CW, Lee LM, Wei YH, Lee HC. 2006. Mitochondrial DNA mutations and mitochondrial DNA depletion in breast cancer. Genes Chromosomes Cancer. 45 7: 629–638.
  • Wallace DC. 2005. Mitochondria and cancer: Warburg addressed. Cold Spring Harb Symp Quant Biol. 70:363–374.
  • Zoer B, Been JV, Jongen E, Debeer A, Hendrickx A, Smeets HJ, Zimmermann LJ, Villamor E. 2010. Mitochondrial DNA damage analysis in bronchoalveolar lavage cells of preterm infants. Front Biosci (Elite Ed). 2:361–368.

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