Publication Cover
Mitochondrial DNA Part A
DNA Mapping, Sequencing, and Analysis
Volume 27, 2016 - Issue 1
133
Views
0
CrossRef citations to date
0
Altmetric
Original Article

Genetic diversity and population structure of black Dahe pig based on DNA sequences analyses of mitochondrial and nuclear genes

, , , , , , & show all
Pages 360-364 | Received 31 Dec 2013, Accepted 16 Feb 2014, Published online: 11 Mar 2014

References

  • Beerli P. (2003). MIGRATE-a maximum likelihood program to estimate gene flow using the coalescent, Tallahassee/Seattle. [Online] Available at: http://evolution.gs.washington.edu/ lamarc/migrate/html (Accessed 26 September 2009)
  • Eding HW, Crooijmans R, Groenen MAM, Meuwissen THE. (2002). Assessing the contribution of breeds to genetic diversity in conservation schemes. Genet Sel Evol 34:613–33
  • Excoffier L, Smouse PE, Quattro JM. (1992). Analysis of molecular variance inferred from metric distances among DNA haplotypes: Application to human mitochondrial DNA restriction data. Genetics 131:479–91
  • Excoffier L, Laval G, Schneider S. (2006). ARLEQUIN (version 3.1): An integrated software package for population genetics data analysis. Evol Bioinform Online 1:47–50
  • Huo JL, Huo HL, Miao YW, Li FQ, Liu LX, Wu GM, Ouyang YN, Qian K. (2009). Genetic diversity of 76 STR loci in the Dahe pig. Zool Res 30:105–8 (article in Chinese with an English abstract)
  • Li SJ, Yang SH, Zhao SH, Fan B, Yu M, Wang HS, Li MH, et al. (2004). Genetic diversity analyses of 10 indigenous Chinese pig populations based on 20 microsatellites. J Anim Sci 82:368–74
  • Liu Y, Liu MZ, Xu YX. (2008). Comparison of three methods for genomic DNA extraction. China Anim Husb Vet Med 35:45–7 (article in Chinese with an English abstract)
  • Shang BH, Yang T, Lian LS, Lu SX. (2007). Study on osteopontin gene polymorphism and relevance analyses between the polymorphism and reproductive traits of black Dahe pig. J Yunnan Agric Univ 22:843–6 (article in Chinese with an English abstract)
  • Sofia SH, Silva CRM, Galindo BA, Almeida FS, Sodre LMK, Martinez CBR. (2006). Population genetic structure of Astyanax scabripinis (Teleostei, Characidae) from an urban stream. Hydrobiology 553:245–54
  • Swofford DL. (2002). PAUP*: Phylogenetic Analyses Using Parsimony (* and Other Methods), Version 4. Sunderland, MA: Sinauer & Associates
  • Tang LZ, Yu L, Chen JG, Wang JJ, Ma M, Lu WD, Zhang TZ. (2012). Sequences polymorphism and variation of major histocompatibility complex DRB exon 2 of black Dahe pig. Afr J Biotechnol 11:4305–10
  • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. (1997). The Clustal_x Windows interface: Flexible strategies for multiple alignment aided by quality analysis tools. Nucleic Acids Res 25:4876–82
  • Wang JY, Guo JF, Zhao DY, Wang C, Zhang Y, Wang HZ, Wu Y. (2009). The genetic diversity and phylogenetic relationship among pig breeds of Shandong province based on mtDNA Cytb gene. Scientia Agric Sinica 42:1761–7. (article in Chinese with an English abstract)
  • Woelders H, Zuidberg CA, Hiemstra SJ. (2006). Animal genetic resources conservation in the Netherlands and Europe: Poultry perspective. Poultry Sci 85:216–22
  • Wu SL, Ju HP, Sun PX, Huang J, Bao WB, Hua JD, Huang XG, Chen GH. (2007). Polymorphism of Exon 2 of SLA-DQB and SLA-DRB genes and its relationship for productive performance in Sutai pigs. J Agric Biotech 15:606–11 (article in Chinese with an English abstract)
  • Yang GM, Zhao YG, Dai ZM. (2006). Effect of dietary energy on carcass quality of black Dahe pig. Feed Res 5:4–6 (article in Chinese with an English abstract)
  • Yang SL, Wang ZG, Liu B, Zhang GX, Zhao SH, Yu M, Fan B. (2003). Genetic variation and relationships of eight Chinese indigenous pig breeds. Genet Sel Evol 35:657–71
  • Zhang FT, Tan DQ. (2010). Genetic diversity in population of largemouth bronze gudgeon (Coreius guichenoti Sauvage et Dabry) from Yangtze River determined by microsatellite DNA analysis. Genes Genet Syst 85:351–7

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.