The diversity of microparasites of rodents: a comparative analysis that helps in identifying rodent-borne rich habitats in Southeast Asia

References

• Brunner JL, Ostfeld RS. Multiple causes of variable tick burdens on small-mammal hosts. Ecology. 2008; 89: 2259–72.
   Web of Science ®Google Scholar
• Paull SH, Song S, McClure KM, Sackett LC, Kilpatrick AM, Johnson PT. From superspreaders to disease hotspots: linking transmission across hosts and space. Front Ecol Environ. 2012; 10: 75–82.
   PubMed Web of Science ®Google Scholar
• Tollenaere C, Rahalison L, Ranjalahy M, Duplantier J-M, Rahelinirina S, Telfer S, etal. Susceptibility to Yersinia pestis experimental infection in wild Rattus rattus, reservoir of plague in Madagascar. EcoHealth. 2010; 7: 242–7.
   Web of Science ®Google Scholar
• Ostfeld RS, Glass GE, Keesing F. Spatial epidemiology: an emerging (or re-emerging) discipline. Trends Ecol Evol. 2005; 20: 328–36.
   PubMed Web of Science ®Google Scholar
• Lambin EF, Tran A, Vanwambeke SO, Linard C, Soti V. Pathogenic landscapes: interactions between land, people, disease vectors, and their animal hosts. Int J Health Geogr. 2010; 9: 54.
   PubMed Web of Science ®Google Scholar
• Patz JA, Daszak P, Tabor GM, Aguirre AA, Pearl M, Epstein J, etal. Unhealthy landscapes: policy recommendations on land use change and infectious disease emergence. Environ Health Perspect. 2004; 112: 1092–8.
   PubMed Web of Science ®Google Scholar
• Ostfeld RS. Biodiversity loss and the rise of zoonotic pathogens. Clin Microbiol Infect. 2009; 15(Suppl 1): 40–3.
   Google Scholar
• Randolph SE, Dobson AD. Pangloss revisited: a critique of the dilution effect and the biodiversity-buffers-disease paradigm. Parasitology. 2012; 139: 847–63.
   Web of Science ®Google Scholar
• Brisson D, Brinkley C, Humphrey PT, Kemps BD, Ostfeld RS. It takes a community to raise the prevalence of a zoonotic pathogen. Interdiscip Perspect Infect Dis. 2011; 2011: 741406.
   Google Scholar
• Roche B, Guégan J-F. Ecosystem dynamics, biological diversity and emerging infectious diseases. C R Biol. 2011; 334: 385–92.
   PubMed Web of Science ®Google Scholar
• Gillespie TR, Chapman C. Forest fragmentation, the decline of an endangered primate, and changes in host-parasite interactions relative to an unfragmented forest. Am J Primatol. 2008; 70: 222–30.
   Web of Science ®Google Scholar
• Goldberg TL. Forest fragmentation as cause of bacterial transmission among nonhuman primates, humans, and livestock, Uganda. Emerg Infect Dis. 2008; 14: 1375–82.
   Web of Science ®Google Scholar
• Cottontail VM, Wellinghausen N, Kalko EK. Habitat fragmentation and haemoparasites in the common fruit bat, Artibeus jamaicensis (Phyllostomidae) in a tropical lowland forest in Panamá. Parasitology. 2009; 136: 1133–45.
   Web of Science ®Google Scholar
• Haydon DT, Cleaveland S, Taylor LH, Laurenson MK. Identifying reservoirs of infection: a conceptual and practical challenge. Emerg Infect Dis. 2002; 8: 1468–73.
   PubMed Web of Science ®Google Scholar
• Meerburg BG, Singleton GR, Kijlstra A. Rodent-borne diseases and their risks for public health. Crit Rev Microbiol. 2009; 35: 221–70.
   PubMed Web of Science ®Google Scholar
• Kuenzi AJ, Douglass RJ, White D. Antibody to Sin Nombre virus in rodents associated with peridomestic habitats in west central Montana. Am J Trop Med Hyg. 2001; 64: 137–46.
   Web of Science ®Google Scholar
• Olsson GE, Leirs H, Henttonen H. Hantaviruses and their hosts in Europe: reservoirs here and there, but not everywhere?. Vector Borne Zoonotic Dis. 2010; 10: 549–61.
   PubMed Web of Science ®Google Scholar
• Suzán G, Armién A, Mills JN. Epidemiological considerations of rodent community composition in fragmented landscapes in Panama. ANYAS. 2008; 89: 684–90.
   Google Scholar
• McFarlane R, Sleigh A, McMichael T. Synanthropy of wild mammals as a determinant of emerging infectious diseases in the Asian-Australasian region. EcoHealth. 2012; 9: 24–35.
   PubMed Web of Science ®Google Scholar
• Ruedas LA, Salazar-Bravo J, Tinnin DS, Armién B, Cáceres L, García A, etal. Community ecology of small mammal populations in Panama following an outbreak of Hantavirus pulmonary syndrome. J Vector Ecol. 2004; 29: 177–91.
   PubMed Web of Science ®Google Scholar
• Sodhi NS, Koh LP, Brook BW, Ng PKL. Southeast Asian biodiversity: an impending disaster. Trends Ecol Evol. 2004; 19: 654–60.
   PubMed Web of Science ®Google Scholar
• Guivier E, Galan M, Chaval Y, Xuéreb A, Ribas Salvador A, Poulle M-L, etal. Landscape genetics highlights the role of bank vole metapopulation dynamics in the epidemiology of Puumala hantavirus. Mol Ecol. 2011; 20: 3569–83.
   Web of Science ®Google Scholar
• Tadin A, Turk N, Korva M, Margaletić J, Beck R, Vucelja M, etal. Multiple co-infections of rodents with hantaviruses, Leptospira, and Babesia in Croatia. Vector Borne Zoonotic Dis. 2012; 12: 388–92.
   Web of Science ®Google Scholar
• Telfer S, Birtles R, Bennett M, Lambin X, Paterson S, Begon M. Parasite interactions in natural populations: insights from longitudinal data. Parasitology. 2008; 135: 767–81.
   Web of Science ®Google Scholar
• Bordes F, Morand S. The impact of multiple infections on wild animal hosts: a review. Infect Ecol Epidemiol. 2011; 1: 1–10.
   Google Scholar
• Bordes F, Morand S. Parasite diversity: an overlooked metric of parasite pressures?. Oikos. 2009; 118: 801–6.
   Web of Science ®Google Scholar
• Morand S, Lopez PJ. Infectious diseases, biodiversity and global changes: how the biodiversity sciences may help. 2010; 231–54. The importance of biological interactions in the study of biodiversity. Book 3. New York, USA: InTech.
   Google Scholar
• Dupuy S, Herbreteau V, Feyfant T, Morand S, Tran A. Land cover dynamics in Southeast Asia: contribution of object-oriented techniques for change detection. Geobia 2012. Proceedings of the 4th Geobia, Rio-de-Janairo, Brazil, 7-9 May, 217–22.
   Google Scholar
• Herbreteau V, Bordes F, Jittapalapong S, Supputamongkol Y, Morand S. Rodent-borne diseases in Thailand: targeting rodent carriers and risky habitats. Infect Ecol Epidemiol. 2012; 2: 2–6.
   Google Scholar
• Ivanova S, Herbreteau V, Blasdell K, Chaval Y, Buchy P, Guillard B, etal. Leptospira and rodents in Cambodia: environmental determinants of infection. Am J Trop Med Hyg. 2012; 86: 1032–8.
   Web of Science ®Google Scholar
• Jiyipong T, Jittapalapong S, Morand S, Raoult D, Rolain J-M. Prevalence and genetic diversity of Bartonella spp. in small mammals from Southeastern Asia. Appl Environ Microbiol. 2012; 78: 8463–6.
   Web of Science ®Google Scholar
• Zuur AF, Ieno EN, Elphick CS. A protocol for data exploration to avoid common statistical problems. Methods Ecol Evol. 2010; 1: 3–14.
   Web of Science ®Google Scholar
• Whittingham MJ, Stephens PA, Bradbury RB, Freckleton RP. Why do we still use stepwise modelling in ecology and behaviour?. J Anim Ecol. 2006; 75: 1182–9.
   PubMed Web of Science ®Google Scholar
• Felsenstein J. Phylogenies and the comparative method. Am Nat. 1985; 125: 1–15.
   Web of Science ®Google Scholar
• Pagès M, Chaval Y, Herbreteau V, Waengsothorn S, Cosson J-F, Hugot J-P, etal. Revisiting the taxonomy of the Rattini tribe: a phylogeny-based delimitation of species boundaries. BMC Evol Biol. 2010; 10: 184.
   PubMed Web of Science ®Google Scholar
• Paradis E, Claude J, Strimmer K. APE: analyses of phylogenetics and evolution in R language. Bioinformatics. 2004; 20: 289–90.
   PubMed Web of Science ®Google Scholar
• Garland T, Harvey H, Ives R. Procedures for the analysis of comparative data using phylogenetically independent contrasts. Syst Biol. 1992; 41: 18–32.
   Web of Science ®Google Scholar
• Bordes F, Guégan JF, Morand S. Microparasite species richness in rodents is higher at lower latitudes and is associated with reduced litter size. Oikos. 2011; 120: 1889–96.
   Web of Science ®Google Scholar
• Bonneaud C, Sepil I, Milá B, Buermann W, Pollinger J, Sehgal RNM, etal. The prevalence of avian Plasmodium is higher in undisturbed tropical forests of Cameroon. J Trop Ecol. 2009; 25: 439.
   Web of Science ®Google Scholar
• Chasar A, Loiseau C, Valkiunas G, Iezhova T, Smith TB, Sehgal RNM. Prevalence and diversity patterns of avian blood parasites in degraded African rainforest habitats. Mol Ecol. 2009; 18: 4121–33.
   PubMed Web of Science ®Google Scholar
• Wells K, Smales LR, Kalko EKV, Pfeiffer M. Impact of rain-forest logging on helminth assemblages in small mammals (Muridae, Tupaiidae) from Borneo. J Trop Ecol. 2007; 23: 35.
   Web of Science ®Google Scholar
• Friggens MM, Beier P. Anthropogenic disturbance and the risk of flea-borne disease transmission. Oecologia. 2010; 164: 809–20.
   PubMed Web of Science ®Google Scholar
• Gottdenker NL, Calzada JE, Saldaña A, Carroll CR. Association of anthropogenic land use change and increased abundance of the Chagas disease vector Rhodnius pallescens in a rural landscape of Panama. Am J Trop Med Hyg. 2011; 84: 70–7.
   Web of Science ®Google Scholar
• Bambaradenyia CNB, Amerasinghe FP. Biodiversity associated with the rice field agroecosystem in Asian countries: a brief review. Working paper 63. 2003; Colombo: International Water Management Institute.
   Google Scholar
• Stenseth NC, Leirs H, Skonhoft A, Davis SA, Pech RP, Andreassen HP, etal. Mice and rats: the dynamics and bio-economics of agricultural rodents pests In a nutshell. Front Ecol Environ. 2003; 1: 367–75.
   Web of Science ®Google Scholar
• Monello RJ, Gompper ME. Differential effects of experimental increases in sociality on ectoparasites of free-ranging raccoons. J Anim Ecol. 2010; 79: 602–9.
   Web of Science ®Google Scholar
• Planchon O, Thothong W, Herbreteau V, Morand S, Valentin C. Environmental changes in Northern Thailand: possible links to rodent-borne diseases. Southeast Asian J Trop Med Publ Health. 2013. in press.
   Google Scholar
• Angelakis E, Khamphoukeo K, Grice D, Newton PN, etal. Molecular detection of Bartonella species in rodents from the Lao PDR. Clin Microbiol Infect. 2009; 15(Suppl 2): 95–7.
   Google Scholar
• Bai Y, Kosoy MY, Lerdthusnee K, Peruski LF, etal. Prevalence and genetic heterogeneity of Bartonella strains cultured from rodents from 17 provinces in Thailand. Am J Trop Med Hyg. 2009; 81: 811–6.
   Web of Science ®Google Scholar