Molecular and morphological evidence for the delimitation of Xylaria hypoxylon

LITERATURE CITED

• Callan BE, Rogers JD. 1990. Teleomorph-anamorph connections and correlations in some Xylaria species. Mycotaxon 36:343–369.
   Google Scholar
• ———, ———. 1993. A synoptic key to Xylaria species from continental United States and Canada based on cultural and anamorphic features. Mycotaxon 46:141–154.
   Google Scholar
• Chacko RJ, Rogers JD. 1981. Cultural characteristics of some species of Xylaria. Mycologia 73:415–428.
   Google Scholar
• Dennis RWG. 1956. Some Xylarias of tropical America. Kew Bull 11:401–444.
   Google Scholar
• ———. 1958. Some Xylosphaeras of tropical Africa. Rev Biol Lisboa 1:175–208.
   Google Scholar
• ———. 1961. Xylarioideae and Thamnomycetoideae of Congo. Bull Jard Bot État 31:109–154.
   Google Scholar
• Gilbert GS, Webb CO. 2007. Phylogenetic signal in plant pathogen-host range. PNAS 104:4979–4983.
   Google Scholar
• Greenhalgh GN, Chesters CGC. 1968. Conidiophore morphology in some British members of the Xylariaceae. Trans Brit Mycol Soc 51:57–82.
   Google Scholar
• Guo LD, Hyde KD, Liew ECY. 2000. Identification of endophytic fungi from Livistona chinensis based on morphology and rDNA sequences. New Phytol 147: 617–630.
   Google Scholar
• Hsieh H-M, Ju Y-M, Rogers JD. 2005. Molecular phylogeny of Hypoxylon and closely related genera. Mycologia 97: 914–923.
   Google Scholar
• Ju YM, Hsieh HM, Ho MC, Szu DH, Fang MJ. 2007. Theissenia rogersii sp. nov. and phylogenetic position of Theissenia. Mycologia 99:612–621.
   Google Scholar
• ———, Rogers JD. 1996. A revision of the genus Hypoxylon. Mycologia Memoir 20. St Paul: APS Press.
   Google Scholar
• Kirk PM, Cannon PF, David JC, Stalpers JA. 2001. Ainsworth and Bisby’s dictionary of the Fungi. 9th ed. Wallingford, UK: CAB International. 456 p.
   Google Scholar
• Læssøe T. 1992. Xylaria digitata: delimitation and typification 1. Persoonia 14:603–613.
   Google Scholar
• ———. 1993. Xylaria digitata: delimitation and typification 2. Persoonia 15:149–153.
   Google Scholar
• ———. 1994. Index Ascomycetum 1. Xylariaceae. Syst Ascomycetum 13:43–112.
   Google Scholar
• Lee JSS, Kwan K, Jung HS. 2000. Phylogenetic analysis of Xylaria based on nuclear ribosomal ITS–5.8S–ITS2 sequences. FEMS Microbiol Lett 187:89–93.
   Google Scholar
• Linnaeus C. 1745. Flora svecica [suecica] exhibens plantas per regnum Sueciae crescentes. Vol. 2. Stockholm: Salvii.
   Google Scholar
• ———. 1753. Species Plantarum, exhibentes plantas rites cognitus ad genera relatas cum differentiis specificis, nominibus trivialibus, synonymis selectis, locis natalibus, secundum systema sexuale digestas. Vol. II. Stockholm: Salvii.
   Google Scholar
• Ludwig W, Strunk O, Westram R, Richter L, Meier H, Yadhukumar, Buchner A, Lai T, Steppi S, Jobb G, Förster W, Brettske I, Gerber S, Ginhart AW, Gross O, Grumann S, Hermann S, Jost R, König A, Liss T, Lüβmann R, May M, Nonhoff B, Reichel B, Strehlow R, Stamatakis A, Stuckmann N, Vilbig A, Lenke M, Ludwig T, Bode A, Schleifer KH. 2004. ARB: a software environment for sequence data. Nuc Acid Res 32: 1363–1371.
   Google Scholar
• Martin P. 1970. Studies in the Xylariaceae VIII. Xylaria and its allies. J S African Bot 36:71–83.
   Google Scholar
• Nixon KC. 1999. The parsimony ratchet, a new method for rapid parsimony analysis. Cladistics 15:407–414.
   Google Scholar
• Peláez F, González V, Platas G, Sánchez-Ballesteros J, Rubio V. 2008. Molecular phylogenetic studies within the family Xylariaceae based on ribosomal DNA sequences. Fungal Divers 31:111–134.
   Google Scholar
• Petrini LE, Petrini O. 1985. Xylariaceous fungi as endophytes. Sydowia 38:216–234.
   Google Scholar
• Platas G, Ruibal C, Collado J. 2004. Size and sequence heterogeneity in the ITS1 of Xylaria hypoxylon isolates. Mycol Res 108:71–75.
   Google Scholar
• Polishook JD, Ondeyka JG, Dobrowski AW, Peláez F, Platas G, Teran AM. 2001. Biogeography and relatedness of Nodulisporium strains producing nodulisporic acid. Mycologia 93:1125–1137.
   Google Scholar
• Rehm H. 1904. Ascomycetes Americae borealis. Annal Mycol 2:175–179.
   Google Scholar
• Roe GW. 1974. Fine structural studies on the asexual state of Xylaria and related genera [Doctoral dissertation] (2 volumes). Univ. of Liverpool.
   Google Scholar
• Rogers JD. 1986. Provisional key to Xylaria species in continental United States. Mycotaxon 26:85–97.
   Google Scholar
• ———. 1990. Teleomorph-anamorph connections and correlations in some Xylaria species. Mycotaxon 36: 343–369.
   Google Scholar
• ———, Ju YM. 1998. Keys to the Xylariaceae (excluding Anthostomella) of the British Isles. Bot J Scot 50:153–160.
   Google Scholar
• Saccardo PA. 1882. Sylloge fungorum omnium hucusque cognitorum I. Patavii (Typis Seminarii). 768 p. (herein Xylaria: p 309–346).
   Google Scholar
• San Martín F, Rogers JD. 1995. Notas sobre la historia, relaciones de hospedante y distribucion del genero Xylaria (Pyrenomycetes, Sphaeriales) en Mexico. Acta Botán Mex 30:21–40.
   Google Scholar
• Sánchez-Ballesteros J, González V, Salazar O, Acero J, Portal MA, Julián M, Rubio V, Bills GF, Polishook J, Platas G, Mochales S, Peláez F. 2000. Phylogenetic study of Hypoxylon and related genera based on ribosomal ITS sequences. Mycologia 92:964–977.
   Google Scholar
• Spatafora J, Blackwell M. 1993. Molecular systematics of unitunicate perithecial Ascomycetes: the Clavicipitales-Hypocreales connection. Mycologia 85:912–922.
   Google Scholar
• Stadler M, Fournier J, Læssøe T, Lechat C, Tichy HV, Piepenbring M. 2008. Recognition of hypoxyloid and xylarioid Entonaema species from a comparison of holomorphic morphology, HPLC profiles, and ribosomal DNA sequences. Mycol Progr 7:53–73.
   Google Scholar
• ———, Læssøe T, Vasilyeva L. 2005. The genus Pyrenomyxa and its affinities to other cleistocarpous Hypoxyloideae as inferred from morphological and chemical traits. Mycologia 97:1129–1139.
   Google Scholar
• ———, Wollweber H, Fournier J. 2004. A host-specific species of Hypoxylon from France and notes on the chemotaxonomy of the ‘Hypoxylon rubiginosum complex’. Mycotaxon 90:187–211.
   Google Scholar
• Triebel D, Pers oh D, Wollweber H, Stadler M. 2005. Phylogenetic relationships among Daldinia, Entonaema and Hypoxylon as inferred from ITS nrDNA analyses of Xylariales. Nov Hedwig 80:25–43.
   Google Scholar
• Zhang N, Castlebury LA, Miller AN, Huhndorf SM, Schoch CL, Seifert KA, Rossman AY, Rogers JD, Kohlmeyer J, Volkmann-Kohlmeyer B, Sung GH. 2006. An overview of the systematics of the Sordariomycetes based on a four-gene phylogeny. Mycologia 98:1076–1087.
   Google Scholar