491
Views
36
CrossRef citations to date
0
Altmetric
Original Articles

Phylogenetic placement of plant pathogenic Sclerotium species among teleomorph genera

, , &
Pages 337-346 | Received 20 Oct 2008, Accepted 14 Jul 2009, Published online: 20 Jan 2017

LITERATURE CITED

  • Aycock R. 1966. Stem rot and other diseases caused by Sclerotium rolfsii. North Carolina Agricultural Experiment Station, Raleigh, Tech Bull 174.
  • Boerema GH, Hamers MEC. 1988. Check-list scientific names of common parasitic fungi. Series 3a: fungi on bulbs: Liliaceae. Netherlands J Plant Pathol 94(suppl.): 29.
  • Bridge P. 2002. The history and application of molecular mycology. Mycologist 16:90–99.
  • Carbone I, Kohn L. 1993. Ribosomal DNA sequence divergence within internal transcribed spacer 1 of the Sclerotiniaceae. Mycologia 85:415–427.
  • Carling DE, Sumner DR. 2001. Rhizoctonia. In: Singleton LL, Mihail JD, Rush CM, eds. Methods for research on soil-borne phytopathogenic fungi. St Paul, Minnesota: American Phytopathological Society. p 157–165.
  • Clements FE, Shear CL. 1973. The genera of fungi. 5th printing. New York: Hafner Publishing Co. 411 p.
  • Donk MA. 1962. The generic names proposed of Hymenomycetes XII, Deuteromycetes. Taxon 11:75–104.
  • Farr DF, Rossman AY, Palm ME, McCray EB. 2008. Fungal databases. Systematic Botany & Mycology Laboratory, ARS, USDA. http://nt.ars-grin.gov/fungaldatabases/
  • Fries E. 1821. Systema mycologicum. Vol. II. p 248. [http://www.cybertruffle.org.uk/cyberliber/01453/index.htm]
  • Gardes M, Bruns TD. 1993. ITS primers with enhanced specificity for basidiomycetes—application to the identification of mycorrhizae and rusts. Mol Ecol 2:113–118.
  • Gonzalez D, Carling DE, Kuninaga S, Vilgalys R, Cubeta MA. 2001. Ribosomal DNA systematics of Ceratobasidium and Thanatephorus with Rhizoctonia anamorphs. Mycologia 93:1138–1150.
  • ———, Cubeta MA, Vilgalys R. 2006a. Phylogenetic utility of indels within ribosomal DNA and beta-tubulin sequences from fungi in the Rhizoctonia species complex. Mol Phylogenet Evol 40:459–470.
  • ———, Portal Onco MA, Susan VR. 2006b. Biology and systematics of the form genus Rhizoctonia. Spanish J Agr Res 4:55–79.
  • Hall TA. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows95/98/NT. Nucleic Acids Symp Ser 41:95–98.
  • Harrington TC, Rizzo DM. 1999. Defining species in the fungi. In: Worrall JJ, ed. Structure and dynamics of fungal populations. Dordrecht, the Netherlands: Kluwer Academic Press. p 43–70.
  • Holst-Jensen A, Vaage M, Schumacher T. 1998. An approximation to the phylogeny of Sclerotinia and related genera. Nord J Bot 18:705–719.
  • Johanson A, Turner HC, McKay GJ, Brown AE. 1998. A PCR-based method to distinguish fungi of the rice sheath-blight complex, Rhizoctonia solani, R. oryzae and R. oryzae-sativae. FEMS Microbiol Lett 162:289–294.
  • Kirk P. 2004. Index Fungorum partnership. CABI Bioscience. [http://www.indexfungorum.org]
  • Kohn LM. 2004. Applying comparative genomics to plant disease epidemiology. Phytoprotection 85:45–48.
  • ———, Grenville DJ. 1989. Anatomy and histochemistry of stromatal anamorphs in Sclerotiniaceae. Can J Bot 67: 371–393.
  • McGrath MT. 2004. What are fungicides? The plant health instructor. DOI: 10.1094/PHI-I-2004-0825-01.
  • Moore RT. 1987. The genera of Rhizoctonia-like fungi: Ascorhizoctonia, Ceratorhiza gen. nov., Epulorhiza gen. nov., Moniliopsis, and Rhizoctonia. Mycotaxon 29:91–99.
  • ———. 1989. Ceratorhiza oryzae-sativae, a new combination for the anamorph of Cerabasidium setariae. Antonie van Leeuwenhoek 55:393–395.
  • Mordue JEM. 1974. Rhizoctonoa oryzae-sativae. CMA Descr. Patho. Fungi Bac. 409.
  • Mullen J. 2001. Southern blight, southern stem blight, white mold. The plant health instructor. DOI: 10.1094/PHI-I-2001-0104-01. Updated 2006.
  • Novak LA, Kohn LM. 1991. Electrophoretic and immunological comparisons of developmentally regulated proteins in members of Sclerotiniaceae and other sclerotial fungi. Appl Environ Microbiol 57:525–534.
  • Parmeter JR Jr, Whitney HS. 1970. Taxonomy and nomenclature of the imperfect state. In: Parmeter JR Jr, ed. Rhizoctonia solani, biology and pathology. Berkeley: Univ California Press. p 7–19.
  • Punja ZK. 1988. Sclerotium (Athelia) rolfsii, a pathogen of many plant species. Adv Plant Path 6:523–533.
  • ———, Damiani A. 1996. Comparative growth, morphology, and physiology of three Sclerotium species. Mycologia 88:694–706.
  • ———, Rahe JE. 2001. Sclerotium. In: Singleton LL, Mihail JD, Rush CM, eds. Methods for research on soil-borne phytopathogenic fungi. St Paul, Minnesota: American Phytopathological Society. p 166–170.
  • Remsberg RE. 1940. Studies in the genus Typhula. Mycologia 32:52–96.
  • Ridgway R. 1912. Color standards and color nomenclature. Baltimore, Maryland: Hoen & Co. Press.
  • Saccardo PA. 1899. Saccardo’s Sylloge Fungorum XIV. Edwards JW, ed. Ann Arbor, Michigan: Edwards Bros Inc. p 1141–1154.
  • Shan XC, Liew ECY, Weatherhead MA, Hodgkiss IJ. 2002. Characterization and taxonomic placement of Rhizoctonia-like endophytes from orchid roots. Mycologia 94: 230–239.
  • Stalpers JA, Andersen TF. 1996. Asynopsis of the taxonomy of teleomorphs connected with Rhizoctonia s.l. In: Sneh B, Jabaji-Hare S, Neate S, Dijst G, eds. Rhizoctonia species: taxonomy, molecular biology, ecology, pathology and disease control. Dordrecht, the Netherlands: Kluwer Academic Publishers. p 49–63.
  • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. 1997. The Clustal X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25: 4876–4882.
  • Tode HI. 1790. Fungi Mecklenburgenses selecti. Luneburg: Apud I.F.G, Lemke. p 2–6.
  • Tredway LP, Burpee LL. 2001. Rhizoctonia diseases of turfgrass. The plant health instructor. DOI: 10.1094/PHI-I-2001-1109-01.
  • Tu CC, Kimbrough JW. 1978. Systematic and phylogeny of fungi in the Rhizoctonia complex. Bot Gaz 139:454–466.
  • Whetzel HH. 1945. A synopsis of the genera and species of the Sclerotiniaceae, a family of stromatic inoperculate discomycetes. Mycologia 37:648–714.
  • White TJ, Bruns T, Taylor J. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ, eds. PCR protocols: a guide to methods and applications. New York: Academic Press. p 315–322.
  • Vilgalys R, Cubeta MA. 1994. Molecular systematics and population biology of Rhizoctonia. Annu Rev Phytopathol 32:135–155.
  • ———, Hester M. 1990. Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. J Bacteriol 172:4238–4246.

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.