Ten polymorphic microsatellite loci identified from a small insert genomic library for Peronospora tabacina

Literature cited

• AmosWHoffmanJIFrodshamAMZhangLBestSHillAVS. 2007. Automated binning of microsatellite alleles: problems and solutions. Mol Ecol Notes 7:10–14, 10.1111/j.1471-8286.2006.01560.x
   Web of Science ®Google Scholar
• AylorDETaylorGSRaynorGS. 1982. Long-range transport of tobacco blue mold spores. Agric Meterol 27:217–232, 10.1016/0002-1571(82)90007-3
   Google Scholar
• Blanco-MenesesMCarboneIIvorsKRistainoJB. 2008. Genetic structure of populations of the tobacco blue mold pathogen Peronospora tabacina in North America, Central America and the Caribbean and Europe. Phytopathology 98:S23.
   Google Scholar
• BruckRIGoodingGVMainCE. 1982. Evidence for resistance to metalaxyl in isolates of Peronospora hyoscyami. Plant Dis 66:44–45, 10.1094/PD-66-44
   Web of Science ®Google Scholar
• CohenYRubinAEGalperinM. 2011. Formation and infectivity of oospores of Pseudoperonospora cubensis, the causal agent of downy mildew in cucurbits. Plant Dis 95:874, 10.1094/PDIS-02-11-0127
   Google Scholar
• DutechCEnjalbertJFournierEDelmotteFBarresBCarlierJTharreauDGiraudT. 2007. Challenges of microsatellite isolation in fungi. Fungal Genet Biol 44: 933–949, 10.1016/j.fgb.2007.05.003
   PubMed Web of Science ®Google Scholar
• GobbinDBleyerGKeilSKassemeyerHHGesslerC. 2007. Evidence for sporangial dispersal leading to a single infection event and a sudden high incidence of grapevine downy mildew. Plant Pathol 56:843–847, 10.1111/j.1365-3059.2007.01651.x
   Google Scholar
• GobbinDJerminiMLoskillBPertotIRaynalMGesslerC. 2005. Importance of secondary inoculum of Plasmopara viticola to epidemics of grapevine downy mildew. Plant Pathol 54:522–534, 10.1111/j.1365-3059.2005.01208.x
   Web of Science ®Google Scholar
• GobbinDPertotIGesslerC. 2003. Identification of microsatellite markers of Plasmopara viticola and establishment of high throughput method for SSR analysis. Eur J Plant Pathol 109: 153– 164, 10.1023/A:1022565405974
   Web of Science ®Google Scholar
• GuptaPKBalyanHSSharmaPCRameschB. 1996. Microsatellites in plants: a new class of molecular markers. Curr Sci 70:45–54.
   Web of Science ®Google Scholar
• HamiltonMBPincusELDi FioreAFleischerRC. 1999. Universal linker and ligation procedures for construction of genomic DNA libraries enriched for microsatellites. BioTechniques 27:500–506.
   PubMed Web of Science ®Google Scholar
• KanetisLWangXWadlPANeufeldKHolmesGOjiamboPSCubetaMATrigianoRN. 2009. Microsatellite loci from the cucurbit downy mildew pathogen Pseudoperonospora cubensis. Mol Ecol Res 9:1460–1466, 10.1111/j.1755-0998.2009.02759.x
   PubMedGoogle Scholar
• KoopmanTLindeCCFouriePHMcLeodA. 2007. Population genetic structure of Plasmopara viticola in the Western Cape province of South Africa. Mol Plant Pathol 8:723–736, 10.1111/j.1364-3703.2007.00429.x
   Google Scholar
• KorbieDJMattickJS. 2008. Touchdown PCR for increased specificity and sensitivity in PCR amplification. Nat Protocols 3:1452–1456, 10.1038/nprot.2008.133
   PubMed Web of Science ®Google Scholar
• KrauthausenHJBauermannWSpringO. 2003. Metalaxyl resistance of Peronospora tabacina in Germany. Nachrichtenblatt Deutscher Pflanzenschutzdienst 55:141–144.
   Google Scholar
• LiouJTShiehBHChenSWLiC. 1999. An improved alkaline lysis method for minipreparation of plasmid DNA. Prep Biochem Biotechnol 29:49–54, 10.1080/10826069908544692
   PubMed Web of Science ®Google Scholar
• LiuKMuseSV. 2005. PowerMarker: intregrated analysis environment for genetic marker data. Bioinformatics 21:2128–2129, 10.1093/bioinformatics/bti282
   PubMed Web of Science ®Google Scholar
• MatasciCLJerminiMGobbinDGresslerC. 2010. Microsatellinte-based population structure of Plasmopara viticola at single vine scale. Eur J Plant Pathol 127: 501–508, 10.1007/s10658-010-9615-z
   Web of Science ®Google Scholar
• PerumalRNimmakayalaPErattaimuthuSRNoE-GReddyJKPromLKOdvodyGNLusterDGMagillCW. 2008. Simple sequence repeat markers useful for sorghum downy mildew (Peronosclerospora sorghi) and related species. BMC Genet 9:77–90, 10.1186/1471-2156-9-77
   Google Scholar
• PupkoTGraurD. 1999. Evolution of microsatellites in the yeast Saccharomyces cerevisiae: role of length and number of repeated units. J Mol Evol 48:313–316, 10.1007/PL00006474
   Google Scholar
• RozenSSkaletskyHJ. 2000. Primer3 on the WWW for general users and biologist programmers. In: KrawetzSMisenerS, eds. Bioinformatics methods and protocols: methods in molecular biology. Totowa, New Jersey: Humana Press. p 365–386.
   Google Scholar
• RungeFThinesM. 2009. A potential perennial host for Pseudoperonospora cubensis in temperate regions. Eur J Plant Pathol 123:483–486, 10.1007/s10658-008-9382-2
   Web of Science ®Google Scholar
• SambrookJRussellDW. 2001. Molecular cloning: a laboratory manual. 3rd ed. Cold Spring Harbor, New York: Cold Spring Harbor Laboratory Press. 2344 p.
   Google Scholar
• SpurrHWToddFA. 1982. Oospores in blue mold disease: North Carolina burley and flue-cured tobacco. Tobacco Sci 26:44–46.
   Google Scholar
• StienekeDLEujaylIA. 2007. Imperfect SSR Finder 1.0. Kimberly, Idaho: USDA-ARS-NWISRL, http://ssr.nwisrl.ars.usda.gov/
   Google Scholar
• SuknoSATaylorAMFarmanML. 2002. Genetic uniformity among isolates of Peronospora tabacina, the tobacco blue mold pathogen. Phytopathology 92: 1236–1244, 10.1094/PHYTO.2002.92.11.1236
   PubMed Web of Science ®Google Scholar
• WadlPAWangXWMoultonJKHokansonSCSkinnerJARinehartTAReedSMPantaloneVRTrigianoRN. 2010. Transfer of Cornus florida and C. kousa simple sequence repeats to selected Cornus (Cornaceae) species. J Am Soc Hortic Sci 135:279–288.
   Google Scholar
• WangXWTrigianoRNWindhamMTDeVriesRESchefflerBERinehartTASpiersJM. 2007. A simple PCR procedure for discovering microsatellites from small insert libraries. Mol Ecol Notes 7:558–561, 10.1111/j.1471-8286.2006.01655.x
   Google Scholar
• WangXWTrigianoRNWindhamMTSchefflerBRinehartTASpiersJM. 2008. Development and characterization of simple sequence repeats for flowering dogwood (Cornus florida L.). Tree Genet Genomes 4: 461– 468, 10.1007/s11295-007-0123-z
   Google Scholar
• ZipperRHammerTRSpringO. 2009. PCR-based monitoring of recent isolates of tobacco blue mold from Europe reveals the presence of two genetically distinct phenotypes differing in fungicide sensitivity. Eur J Plant Pathol 123:367–375, 10.1007/s10658-008-9373-3
   Web of Science ®Google Scholar