Inocybe section Rimosae in Utah: phylogenetic affinities and new species

Literature cited

• AmmiratiJFParkerADMathenyPB. 2007. Cleistocybe, a new genus of Agaricales. Mycoscience 48:282–289, 10.1007/s10267-007-0365-5
   Google Scholar
• CrippsCL. 1997. The genus Inocybe in Montana aspen stands. Mycologia 89:670–688, 10.2307/3761005
   Web of Science ®Google Scholar
• Esteve-RaventósFGarcía BlancoASanz CarazoMDel ValJB. 2003. Inocybe aurantiobrunnea and I. pseudo-orbata, two new Mediterranean species found in the Iberian Peninsula. Österr Z Pilzk 12:89–99.
   Google Scholar
• GardesMBrunsTD. 1993. ITS primers with enhanced specificity for basidiomycetes—application to the identification of mycorrhizae and rusts. Mol Ecol 2:113–118, 10.1111/j.1365-294X.1993.tb00005.x
   PubMed Web of Science ®Google Scholar
• GouyMGuindonSGascuelO. 2010. SeaView version 4: a multiplatform graphical user interface for sequence alignment and phylogenetic tree building. Mol Biol Evol 27:221–224, 10.1093/molbev/msp259
   PubMed Web of Science ®Google Scholar
• GrundDWStuntzDE. 1968. NovaScotianInocybesI. Mycologia 60:406–425, 10.2307/3757170
   Web of Science ®Google Scholar
• GrundDWStuntzDE. 1975. NovaScotianInocybesIII. Mycologia 67:19–31, 10.2307/3758223
   Web of Science ®Google Scholar
• GrundDWStuntzDE. 1983. NovaScotiaInocybesVII. Mycologia 75:257–270, 10.2307/3792810
   Google Scholar
• HeimR. 1931. Le genre Inocybe précédé d’une introduction general à l’étude des Agarics ochrosporés. Paris: Paul Lechevalier & Fils. 431 p.
   Google Scholar
• JacobssonSLarssonE. 2009. Inocybe spuria, a new species in section Rimosaefrom boreal coniferous forests. Mycotaxon 109:201–207, 10.5248/109.201
   Web of Science ®Google Scholar
• JudgeBSAmmiratiJFLincoffGHTrestrailJHMathenyPB. 2010. Ingestion of a newly described North American mushroom species from Michigan resulting in chronic renal failure: Cortinarius orellanosus. Clin Toxicol 48:545–549, 10.3109/15563650.2010.495346
   PubMed Web of Science ®Google Scholar
• KauffmanCH. 1918. The Agaricaceae of Michigan. Lansing, Michigan: Wynkoop Halenbeck. 962 p.
   Google Scholar
• KauffmanCH. 1924. Inocybe. North Am Flora 10:227–260.
   Google Scholar
• KuyperTW. 1986. A revision of the genus Inocybe in Europe I. Subgenus Inosperma and the smooth-spored species of subgenus Inocybe. Persoonia (Suppl.) 3:1–247.
   Google Scholar
• LarkinMABlackshieldsGBrownNPChennaRMcGettiganPAMcWilliamsHValentinFWallaceIMWilmALopezRThompsonJDGibsonTJHigginsDG. 2007. Clustal W and Clustal X version 2.0. Bioinformatics 23:2947–2948, 10.1093/bioinformatics/btm404
   PubMed Web of Science ®Google Scholar
• LarssonERybergMMoreauP-AMathiesenADJacobssonS. 2009. Taxonomy and evolutionary relationships within species of section Rimosae(Inocybe) based on ITS, LSU and mtSSU sequence data. Persoonia 23:86–98, 10.3767/003158509X475913
   PubMed Web of Science ®Google Scholar
• MaddisonDRMaddisonWP. 2005. MacClade 4.08. Sunderland, Massachusetts: Sinauer Associates.
   Google Scholar
• MathenyPB. 2005. Improving phylogenetic inference of mushrooms with RPB1 and RPB2 nucleotide sequences (Inocybe; Agaricales). Mol Phylogenet Evol 35:1–20, 10.1016/j.ympev.2004.11.014
   PubMed Web of Science ®Google Scholar
• MathenyPB. 2009. A phylogenetic classification of the Inocybaceae. McIlvainea 18:11–21.
   Google Scholar
• MathenyPBAimeMCBougherNLBuyckBDesjardinDEHorakEKroppBRLodgeDJTrappeJMHibbettDS. 2009. Out of the palaeotropics? Historical biogeography and diversification of the cosmopolitan mushroom family Inocybaceae. J Biogeogr 36: 577–592, 10.1111/j.1365-2699.2008.02055.x
   Web of Science ®Google Scholar
• MathenyPBLiuYJAmmiratiJFHallBD. 2002. Using RPB1 sequences to improve phylogenetic inference among mushrooms (Inocybe, Agaricales). Am J Bot 89:688–698, 10.3732/ajb.89.4.688
   PubMed Web of Science ®Google Scholar
• MathenyPBWatlingR. 2004. A new and unusual species of Inocybe (Inosperma clade) from tropical Africa. Mycotaxon 89:497–503.
   Web of Science ®Google Scholar
• Munsell Color. 1976. The Munsell book of color. New Windsor, New York: GretagMacBeth.
   Google Scholar
• Munsell Color. 2000. Munsell soil color charts. New Windsor, New York: GretagMacbeth.
   Google Scholar
• RomagnesiH. 1958. Compléments à la Flore Analytique. IX) Inocybe obsoleta Romagn. Bull Trimest Soc Mycol Fr 74:145–148.
   Google Scholar
• RybergMLarssonEJacobssonS. 2010. An evolutionary perspective on morphological and ecological characters in the mushroom family Inocybaceae (Agaricomycotina, Fungi). Mol Phylogenet Evol 55:431–442, 10.1016/j.ympev.2010.02.011
   Web of Science ®Google Scholar
• RybergMMathenyPB. 2012. Asynchronous origins of ectomycorrhizal clades of Agaricales. Proc R Soc B 279:2003–2011, 10.1098/rspb.2011.2428
   Google Scholar
• SmithAHStuntzDE. 1950. New or noteworthy fungi from Mount Rainier National Park. Mycologia 42:80–134, 10.2307/3755245
   Web of Science ®Google Scholar
• StamatakisA. 2006. RAxML-VI-HPC: maximum-likelihood-based phylogenetic analysis with thousands of taxa and mixed models. Bioinformatics 22: 2688–2690, 10.1093/bioinformatics/btl446
   PubMed Web of Science ®Google Scholar
• StamatakisAHooverPRougemontJ. 2008. A rapid bootstrap algorithm for the RAxML web servers. Syst Biol 57:758–771, 10.1080/10635150802429642
   PubMed Web of Science ®Google Scholar
• StuntzDE. 1954. Studies on the genus Inocybe II. New and noteworthy species from Michigan. Pap Mich Acad Sci 39:53–84.
   Google Scholar
• Thiers B [continuously updated] Index herbariorum: a global directory of public herbaria and associated staff New York Botanical Garden’s Virtual Herbarium. http://sweetgum.nybg.org/ih/.
   Google Scholar
• WhiteTJBrunsTLeeSTaylorJW. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: InnisMAGelfandDHSninskyJJWhiteTJ, eds. PCR protocols: a guide to methods and applications. New York: Academic Press. p 315–322.
   Google Scholar