Literature cited
- AbadZGAbadJACacciolaSOPaneAFaeddaRMoralejoEPérez-SierraAAbad-CamposPAlvarez-BernaolaLABakonyiJJózsaAHerreroMLBurgessTICunningtonJHSmithIWBalciYBlomquistCHenricotBDentonGSpiesCMcLeodABelbahriLCookeDKageyamaKUematsuSKurbetliIDeğirmenciK. 2014. Phytophthora niederhauserii sp. nov., a polyphagous species associated with ornamentals, fruit trees and native plants in 13 countries. Mycologia 106:431–447, doi:10.3852/12-119
- BertierLBrouwerHde CockAWAMCookeDELOlssonCHBHöfteM. 2013. The expansion of Phytophthora clade 8b: three new species associated with winter-grown vegetable crops. Persoonia 31:63–76, doi:10.3767/003158513X668554
- BlairJECoffeyMDParkSYGeiserDMKangS. 2008. A multilocus phylogeny for Phytophthora utilizing markers derived from complete genome sequences. Fungal Genet Biol 45:266–277, doi:10.1016/j.fgb.2007.10.010
- BrasierCM. 2008. The biosecurity threat to the UK and the global environment from international trade in plants. Plant Pathol 57:792–808, doi:10.1111/j.1365-3059.2008.01886.x
- CrousPWVerkleyJZGroenwaldJZSamsonRA. 2009. Fungal biodiversity. CBS Laboratory Manual Series. Utrecht, the Netherlands: CBS-KNAW Fungal Biodiversity Centre. 221 p.
- DarribaDTaboadaGLDoalloRPosadaD. 2012. JModelTest 2: more models, new heuristics and parallel computing. Nature Methods 9:772, doi:10.1038/nmeth.2109
- DrummondAJAshtonBBuxtonSCheungMCooperADuranCHeledJKearseMMarkowitzSMoirRStones-HavasSSturrockSSwidanFThiererTWilsonA. 2012. Geneious 6.1.6. http://www.geneious.com ( accessed 15 Oct 2013).
- ErwinDCRibeiroOK. 1996. Phytophthora diseases worldwide. St Paul, Minnesota: American Phytopathological Society Press. 562 p.
- GoodwinSBDunkleLDZismannVL. 2001. Phylogenetic analysis of Cercospora and Mycosphaerella based on the internal transcribed spacer region of ribosomal DNA. Phytopathology 91:648–658, doi:10.1094/PHYTO.2001.91.7.648
- GrünwaldNJWerresSGossEMTaylorCRFielandVJ.2011. Phytophthora obscura sp. nov., a new species of the novel Phytophthora subclade 8d. Plant Pathol 61:610–622, doi:10.1111/j.1365-3059.2011.02538.x
- HongCGalleglyMRichardsonPKongP. 2011. Phytophthora pini Leonian, resurrected to distinct species. Mycologia 103:351–360, doi:10.3852/10-058
- HuelsenbackJPRonquistF. 2001. MrBayes: Bayesian inference of phylogeny. Bioinformatics 17:754–755, doi:10.1093/bioinformatics/17.8.754
- IlievaEMan in ’t VeldWAVeenbaas-RijksWPietersR. 1998. Phytophthora multivesiculata, a new species causing rot in Cymbidium. Eur J Plant Pathol 104: 677–683, doi:10.1023/A:1008628402399
- JeffersSNMartinSB. 1986. Comparison of two media selective for Phytophthora and Pythium species. Plant Dis 70:1038–1043, doi:10.1094/PD-70-1038
- JungTBurgessTI. 2009. Re-evaluation of Phytophthora citricola isolates from multiple woody hosts in Europe and North America reveals a new species, Phytophthora plurivora sp. nov. Persoonia 22:95–110, doi:10.3767/003158509X442612
- KatohKMisawaKKumaKMiyataT. 2002. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res 30: 3059–3066, doi:10.1093/nar/gkf436
- KroonLPNMBakkerFTvan den BoschGBBonantsPJMFlierWG. 2004. Phylogenetic analysis of Phytophthora species based on mitochondrial and nuclear DNA sequences. Fungal Genet Biol 41:766–782, doi:10.1016/j.fgb.2004.03.007
- KroonLPNMBrouwerHde CockAWAMGoversF. 2012. The genus Phytophthora anno 2012. Phytopathology 102: 348–364, doi:10.1094/PHYTO-01-11-0025
- Man in ’t VeldWA. 2007. Gene flow analysis demonstrates that Phytophthora fragariae var. rubi constitutes a distinct species: Phytophthora rubi comb. nov. Mycologia 99:222–226, doi:10.3852/mycologia.99.2.222
- Man in ’t VeldWAGoversFMeijerHJ. 2007. Correlation of isozyme profiles with genomic sequences of Phytophthora ramorum and its P. sojae orthologs. Curr Gen 52:247–257, doi:10.1007/s00294-007-0160-z
- MascherettiSCroucherPJPKozanitasMBakerLGarbelottoM. 2009. Genetic epidemiology of the sudden oak death pathogen Phytophthora ramorum in California. Mol Ecol 18:4577–4590, doi:10.1111/j.1365-294X.2009.04379.x
- MayrE. 1942. Systematics and the origin of species. New York: Colombia Univ. Press. 340 p.
- MitchellDJKannwischer-MitchellME. 1992. Phytophthora. In: SingletonLLMihailJDRushCM, eds. Methods for research on soilborne pathogenic fungi. St Paul, Minnesota: American Phytopathological Society Press. p 31–38.
- OlsonHACarboneIBensonDM. 2011. Phylogenetic history of Phytophthora cryptogea and P. drechsleri isolates from floriculture crops in North Carolina greenhouses. Phytopathology 101:1373–1384, doi:10.1094/PHYTO-11-10-0302
- ScottPMBurgessTIBarberPAShearerBLStukelyMJCHardyGEStJJungT. 2009. Phytophthora multivora sp. nov., a new species recovered from declining Eucalyptus, Banksia, Agonis and other plant species in Western Australia. Persoonia 22:1–13, doi:10.3767/003158509X415450
- VercauterenAde DobbelaereIGrünwaldNJBonantsPvan BockstaeleEMaesMHeungensK. 2010. Clonal expansion of the Belgian Phytophthora ramorum populations based on new microsatellite markers. Mol Ecol 19:92–107, doi:10.1111/j.1365-294X.2009.04443.x
- VettrainoAMBrasierCMBrownAVVanniniA. 2011. Phytophthora himalsilva sp. nov., an unusually phenotypically variable species from a remote forest in Nepal. Fungal Biol 115:275–287, doi:10.1016/j.funbio.2010.12.013
- von BalthazarMEnddressPKQuitY-L. 2000. Phylogenetic relationships in Buxaceae based on nuclear internal transcribed spacers and plastid NDHF sequences. Int J Plant Sci 161:785–792, doi:10.1086/314302
- WhiteTJBrunsTLeeSTaylorJ. 1990. Amplification and direct sequencing of fungal ribosomal RA genes for phylogenetics. In: InnisMAGelfandDHSninskyJJWhiteTJ, eds. PCR protocols: a guide to methods and applications. San Diego, California: Academic Press. p 315–322.