Assessment of the fungal diversity and succession of ligninolytic endophytes in Camellia japonica leaves using clone library analysis

Literature cited

• AlhamdLHagiharaA. 2004. Litterfall of a subtropical evergreen broad-leaved forest in Okinawa Island, Japan. Tropics 13:255–268 , doi:10.3759/tropics.13.255
   Google Scholar
• AltschulSFGishWMillerWMyersEWLipmanDJ. 1990. Basic local alignment search tool. J Mol Biol 215:403–410.
   PubMed Web of Science ®Google Scholar
• ArnoldAE. 2008. Endophytic fungi: hidden components of tropical community ecology. In: CarsonWPSchnitzerSA, eds. Tropical forest community ecology. Oxford, UK: Wiley-Blackwell. p 254–271.
   Google Scholar
• ArnoldAEHenkDAEllsRLLutzoniFVilgalysR. 2007. Diversity and phylogenetic affinities of foliar fungal endophytes in loblolly pine inferred by culturing and environmental PCR. Mycologia 99:185–206 , doi:10.3852/mycologia.99.2.185
   PubMed Web of Science ®Google Scholar
• ColwellRK. 2006. EstimateS: statistical estimation of species richness and shared species from samples. Version 8.20. ( purl.oclc.org/estimates)
   Google Scholar
• DeckertRJMelvilleLHPetersonRL. 2001. Structural features of a Lophodermium endophyte during the cryptic life-cycle phase in the foliage of Pinus strobus. Mycol Res 105:991–997.
   Google Scholar
• EnokiT. 2003. Microtopography and distribution of canopy trees in a subtropical evergreen broad-leaved forest in the northern part of Okinawa Island, Japan. Ecol Res 18:103–113 , doi:10.1046/j.1440-1703.2003.00549.x
   Web of Science ®Google Scholar
• HiroseDOsonoT. 2006. Development and seasonal variations of Lophodermium populations on Pinus thunbergii needle litter. Mycoscience 47:242–247 , doi:10.1007/s10267-006-0299-3
   Google Scholar
• HudsonHJ. 1968. The ecology of fungi on plant remains above the soil. New Phytol 67:837–874 , doi:10.1111/j.1469-8137.1968.tb06399.x
   Web of Science ®Google Scholar
• KauserudHMathiesenCOhlsonM. 2008. High diversity of fungi associated with living parts of boreal forest bryophytes. Botany 86:1326–1333 , doi:10.1139/B08-102
   Web of Science ®Google Scholar
• KoideKOsonoTTakedaH. 2005a. Colonization and lignin decomposition of Camellia japonica leaf litter by endophytic fungi. Mycoscience 46:280–286 , doi:10.1007/s10267-005-0247-7
   Google Scholar
• KoideKOsonoTTakedaH. 2005b. Fungal succession and decomposition of Camellia japonica leaf litter. Ecol Res 20:599–609 , doi:10.1007/s11284-005-0077-2
   Web of Science ®Google Scholar
• LandeweertRLeeflangPKuyperTWHofflandERoslingAWernarsKSmitE. 2003. Molecular identification of ectomycorrhizal mycelium in soil horizons. Appl Environ Microbiol 69:327–333 , doi:10.1128/AEM.69.1.327-333.2003
   PubMed Web of Science ®Google Scholar
• O’BrienHEParrentJLJacksonJAMoncalvoJMVilgalysR. 2005. Fungal community analysis by large-scale sequencing of environmental samples. Appl Environ Microbiol 71:5544–5550 , doi:10.1128/AEM.71.9.5544-5550.2005
   PubMed Web of Science ®Google Scholar
• OksanenJKindtRLegendrePalet. 2008. Vegan: community ecology package. Version 1. 15.11. Available from http://vegan.r-forge.r-project.org/
   Google Scholar
• OsonoT. 2006. Role of phyllosphere fungi of forest trees in the development of decomposer fungal communities and decomposition of leaf litter. Can J Microbiol 52: 701–716 , doi:10.1139/w06-023
   PubMed Web of Science ®Google Scholar
• OsonoT. 2007. Ecology of ligninolytic fungi associated with leaf litter decomposition. Ecol Res 22:955–974 , doi:10.1007/s11284-007-0390-z
   Web of Science ®Google Scholar
• OsonoT. 2008. Endophytic and epiphytic phyllosphere fungi of Camellia japonica: seasonal- and leaf age-dependent variations. Mycologia 100:387–391 , doi:10.3852/07-110R1
   PubMed Web of Science ®Google Scholar
• OsonoT. 2009. Evaluation of ligninolytic properties of litter bleaching fungi collected in the southwest subtropics in Japan. Annual Rep Explor Introduction Microb Genet Res 22:33–41.
   Google Scholar
• OsonoTHiroseD. 2009. Effects of prior decomposition of Camellia japonica leaf litter by an endophytic fungus on the subsequent decomposition by fungal colonizers. Mycoscience 50:52–55 , doi:10.1007/s10267-008-0442-4
   Web of Science ®Google Scholar
• OsonoTHiroseD. 2011. Colonization and lignin decomposition of pine needle litter by Lophodermium pinastri. For Path 41:156–162 , doi:10.1111/j.1439-0329.2010.00648.x
   Google Scholar
• OsonoTIshiiYHiroseD. 2008. Fungal colonization and decomposition of Castanopsis sieboldii leaves in a subtropical forest. Ecol Res 23:909–917 , doi:10.1007/s11284-007-0455-z
   Web of Science ®Google Scholar
• PiankaER. 1973. The structure of lizard communities. Ann Rev Ecol Syst 4:53–74 , doi:10.1146/annurev.es.04.110173.000413
   Google Scholar
• PollCBruneTBegerowDKandelerE. 2010. Small-scale diversity and succession of fungi in the detritusphere of rye residues. Microb Ecol 59:130–140 , doi:10.1007/s00248-009-9541-9
   Google Scholar
• SaikkonenK. 2007. Forest structure and fungal endophytes. Fungal Biol Rev 21:67–74 , doi:10.1016/j.fbr.2007.05.001
   Google Scholar
• SeenaSWynbergNBärlocherF. 2008. Fungal diversity during leaf decomposition in a stream assessed through clone libraries. Fungal Divers 30:1–14.
   Web of Science ®Google Scholar
• SieberTN. 2007. Endophytic fungi in forest trees: Are they mutualists? Fungal Biol Rev 21:75–89 , doi:10.1016/j.fbr.2007.05.004
   Google Scholar
• StoneJK. 1987. Initiation and development of latent infections by Rhabdocline parkeri on Douglas-fir. Can J Bot 65:2614–2621 , doi:10.1139/b87-352
   Google Scholar
• SuskeJAckerG. 1987. Internal hyphae in young, symptomless needles of Picea abies: electron microscopic and cultural investigation. Can J Bot 65:2098–2103 , doi:10.1139/b87-288
   Google Scholar
• TaylorDLHerriottICStoneKEMcFarlandJWBoothMGLeighMB. 2010. Structure and resilience of fungal communities in Alaskan boreal forest soils. Can J For Res 40:1288–1301 , doi:10.1139/X10-081
   Google Scholar
• VandenkoornhuysePBaldaufSLLeyvalCStraczekJYoungPW. 2002. Extensive fungal diversity in plant roots. Science 295:2051 , doi:10.1126/science.295.5562.2051
   PubMed Web of Science ®Google Scholar
• VilgalysRHesterM. 1990. Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. J Bacteriol 172:4238–4246.
   PubMed Web of Science ®Google Scholar