242
Views
2
CrossRef citations to date
0
Altmetric
Original Articles

Taxonomy and phylogenetic position of Fomitiporia torreyae, a causal agent of trunk rot on Sanbu-sugi, a cultivar of Japanese cedar (Cryptomeria japonica) in Japan

, , , , , & show all
Pages 66-76 | Received 02 Apr 2013, Accepted 28 Jun 2013, Published online: 20 Jan 2017

Literature cited

  • AmalfiMRaymundoTValenzuelaRDecockC. 2012. Fomitiporia cupressicola sp. nov., a parasite on Cupressus arizonica, and additional unnamed clades in the southern USA and northern Mexico, determined by multilocus phylogenetic analyses. Mycologia 104:880–893, doi:10.3852/11-196
  • AmalfiMYombiyeniPDecockC. 2010. Fomitiporia in sub-Saharan Africa: Morphology and multigene phylogenetic analysis support three new species from the Guineo-Congolian rainforest. Mycologia 102:1303–1317, doi:10.3852/09-083
  • AoshimaKHayashiYYonebayashiHKondoH. 1964. Hi-akagaresei-mizogusare-byo, trunk rot on Sanbu-sugi. The 91st annual meeting of the Japanese Forest Society. p 392–397 (in Japanese).
  • BandeltH-JForsterPRöhalA. 1999. Median-joining networks for inferring intraspecific phylogenies. Mol Biol Evol 16:37–48, doi:10.1093/oxfordjournals.molbev.a026036
  • CuiB-KDaiY-C. 2008. Wood-rotting fungi in eastern China 2. A new species of Fomitiporia (Basidiomycota) from Wanmulin Nature Reserve, Fujian Province. Mycotaxon 105:343–348.
  • DaiY-CCuiB-K. 2005. Two new species of Hymenochaetaceae from eastern China. Mycotaxon 94:341–347.
  • DaiY-CCuiB-KDecockC. 2008. A new species of Fomitiporia (Hymenochaetaceae, Basidiomycota) from China based on morphological and molecular characters. Mycol Res 112:375–380, doi:10.1016/j.mycres.2007.11.020
  • DaiY-CZangM. 2002. Fomitiporia tibetica, a new species of Hymenochaetaceae. Mycotaxon 83:217–222.
  • DaiY-CZhangX-QZhouT-S. 2001. New and noteworthy species of Hymenochaetaceae from China. Mycosystema 20:16–21.
  • DecockCBitewACastilloG. 2005. Fomitiporia tenuis and Fomitiporia aethiopica (Basidiomycetes, Hymenochaetales), two undescribed species from the Ethiopian highlands: taxonomy and phylogeny. Mycologia 97:121–129, doi:10.3852/mycologia.97.1.121
  • DecockCFigueroaSHRobledoGCastilloG. 2007. Fomitiporia punctata (Basidiomycota, Hymenochaetales) and its presumed taxonomic synonyms in America: taxonomy and phylogeny of some species from tropical/subtropical areas. Mycologia 99:733–752, doi:10.3852/mycologia.99.5.733
  • FelsensteinJ. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783–791, doi:10.2307/2408678
  • FiassonJLNiemeläT. 1984. The Hymenochaetales: a revision of the European poroid taxa. Karstenia 24:14–28.
  • FischerM. 1996. On the species complexes within Phellinus: Fomitiporia revised. Mycol Res 100:1459–1467, doi:10.1016/S0953-7562(96)80078-5
  • FischerM. 2002. A new wood-decaying basidiomycete species associated with esca of grapevine: Fomitiporia mediterranea (Hymenochaetales). Mycol Prog 1:315–324, doi:10.1007/s11557-006-0029-4
  • FischerMBinderM. 2004. Species recognition, geographic distribution and host-pathogen relationships: a case study in a group of lignicolous Basidiomycetes, Phellinus s.l. Mycologia 96:799–811, doi:10.2307/3762113
  • FischerMEdwardsJCunningtonJHPascoeIG. 2005. Basidiomycetous pathogens on grapevine: a new species from Australia—Fomitiporia australiensis. Mycotaxon 92:85–96.
  • GardesMBrunsT. 1993. ITS primers with enhanced specificity for basidiomycetes: application to the identification of mycorrhizae and rusts. Mol Ecol 2:113–118, doi:10.1111/j.1365-294X.1993.tb00005.x
  • GardesMKassemeyerH-H. 2003. Fungal associated with esca disease of grapevine in Germany. Vitis 42:109–116.
  • HattoriTTanakaMKuriuT. 2011. Dieback caused by Fomitiporia sp. on Sciadopitys verticillata. Abstract of annual meeting Forestry Society of Japan 123:pb053 (in Japanese).
  • HuelsenbeckJPRonquistF. 2001. MrBAYES: Bayesian inference of phylogeny. Bioinformatics 17:754–755, doi:10.1093/bioinformatics/17.8.754
  • ImazekiR. 1960. A new disease of Sanbu-sugi, “Hi-akagaresei-mizogusare-byo”, and its ecological prevention. For Pest News 9:230–235 (in Japanese).
  • ItoK. 1974. Pathology of Forest Trees III. Tokyo: Norin Shuppan (in Japanese).
  • KanekoYNakamuraHShiotaASuzukiTHattoriTOtaYYasudaMiyukiYUshioS. 2011. Identification and definition of the fungus of Japanese pear dwarf caused by Fomitiporia sp. Jpn J Phytopathol 77:168 (in Japanese).
  • KanekoYNakamuraHUshioS. 2012. Heterothallism in Fomitiporia sp. causing Japanese pear dwarf. Jpn J Phytopathol 78:159–168 (in Japanese with English summary), doi:10.3186/jjphytopath.78.159
  • MathenyPB. 2005. Improving phylogenetic inference of mushrooms with RPB1 and RPB2 nucleotide sequences (Inocybe; Agaricales). Mol Phylogenet Evol 35:1–20, doi:10.1016/j.ympev.2004.11.014
  • MathenyPBWangZBinderMCurtisJMLimYWNilssonRHHughesKWHofstetterVAmmiratiJFSchochCLLangerELangerGMcLaughlinDJWilsonAWFroslevTGeZWKerriganRWSlotJCYangZLBaroniTJFischerMHosakaKMatsuuraKSeidlMTVaurasJHibbettDS. 2007. Contributions of rpb2 and tef1-α to the phylogeny of mushrooms and allies (Basidiomycota, Fungi). Mol Phylogenet Evol 43:430–451, doi:10.1016/j.ympev.2006.08.024
  • MatsubaraIIshitaniEFujibayashiNNakagawaS. 2009. Ratio of outbreak of sap rots caused by Phellinus punctatus in Sanbu-sugi cryptomeria stand under early and hard pruning. Kanto Shinrin Kenkyu 60:215–216 (in Japanese).
  • MiyajimaH. 1973. Approach to intensive culture and forest tree breeding of Cryptomeria in Japan. Bull Kyushu Univ For 47:13–20.
  • MurrillWA. 1904. The Polyporaceae of North America IX. Inonotus, Sesia and monotypic genera. Bull Torrey Bot Club 31:593–610, doi:10.2307/2478612
  • MurrillWA. 1907. Polyporaceae. North American Flora 9:1–72.
  • NylanderJAA. 2004. MrModeltest 2. Uppsala, Sweden: Evolutionary Biology Centre, Uppsala University. Program distributed by the author.
  • OwakuS. 1968. The comparison of the disease rate of “Hi-akagare-sei mizogusare-byo” between inside and the border of the forest. Ann Rep Chiba Pref For Res Inst 3:77–79.
  • RonquistFHuelsenbeckJP. 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572–1574, doi:10.1093/bioinformatics/btg180
  • RyvardenLGilbertsonRL. 1994. European polypores 2. Meripilus-Tyromyces. Synopsis Fungorum 7, Oslo, Norway: Fungiflora. p 392–743.
  • SakumaTTakamuraNOchiaiMKobayashiTAbeYTanakaHTakanashiK. 1993. Occurrence of Hypoxylon heart wood rot and pear dwarf on Japanese pear (Pyrus pyriforia Nakai). Bull Fruit Tree Res Stn 24:45–59 (in Japanese with English summary).
  • SwoffordDL. 2002. PAUP* 4.0b10: phylogenetic analysis using parsimony (*and other methods). Sunderland, Massachusetts: Sinauer Associates.
  • TamuraKPetersonDPetersonNStecherGNeiMKumarS. 2011. MEGA 5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance and maximum parsimony methods. Mol Biol Evol 28:2731–2739, doi:10.1093/molbev/msr121
  • TerashimaY. 2012. Influence of stem rot pathogen Fomitiporia sp. on “Sanbu-sugi” cultivar of the Japanese cedar Cryptomeria japonica. J Wood Sci, doi:10.1007/s10086-012-1290-6
  • ThompsonJDGibsonTJPlewniakFJeanmouginFHigginsDG. 1997. The Clustal X Windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876–4882, doi:10.1093/nar/25.24.4876
  • UrcelayCRobledoGRajchenbergM. 2000. Phellinus tabaquilio sp. nov. from Córdoba mountains, central Argentina. Mycotaxon 76:287–291.
  • WagnerTFischerM. 2001. Natural groups and a revised system for the European poroid Hymenochaetales (Basidiomycota) supported by LSU rDNA sequence data. Mycol Res 105:773–782, doi:10.1017/S0953756201004257
  • WagnerTFischerM. 2002. Proceedings toward a natural classification of the worldwide taxa Phellinus s. l., Inonotus s. l., and phylogenetic relationships of allied genera. Mycologia 94:998–1016, doi:10.2307/3761866

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.