Discovery of a sexual cycle in Talaromyces amestolkiae

Literature cited

• BenjaminCR. 1955. Ascocarps of Aspergillus and Penicillium. Mycologia 47:669–687, doi:10.2307/3755578
   Web of Science ®Google Scholar
• BerbeeMLYoshimuraASugiyamaJTaylorJW. 1995. Is Penicillium monophyletic? An evaluation of phylogeny in the family Trichocomaceae from 18S, 5.8S and ITS ribosomal DNA sequence data. Mycologia 87:210–222, doi: 10.2307/3760907
   Web of Science ®Google Scholar
• BlakesleeAF. 1904. Sexual reproduction in the Mucorineae. Proc Am Acad Arts Sci 40:205–319, doi:10.2307/20021962
   Google Scholar
• BoekhoutTTheelenBDiazMFellJWHopWCJAbelnECADromerFMeyerW. 2001. Hybrid genotypes in the pathogenic yeast Cryptococcus neoformans. Microbiology 147:891–907, doi:10.1099/00221287-147-4-891
   PubMed Web of Science ®Google Scholar
• BöhmJHoffBO’GormanCMWolfersSKlixVBingerDZadraIKürnsteinerHPöggelerSDyerPSKückU. 2013. Sexual reproduction and mating-type-mediated strain development in the penicillin-producing fungus Penicillium chrysogenum. Proc Nat Acad Sci USA 110:1476–1481, doi:10.1073/pnas.1217943110
   Google Scholar
• BruenTCPhilippeHBryantD. 2006. A simple and robust statistical test for detecting the presence of recombination. Genetics 172:2665–2681, doi:10.1534/genetics.105.048975
   PubMed Web of Science ®Google Scholar
• BryantDMoultonV. 2004. NeighborNet: an agglomerative method for the construction of phylogenetic networks. Mol Biol Evol 21:255–265, doi:10.1093/molbev/msh018
   PubMed Web of Science ®Google Scholar
• DodgeBO. 1957. Rib formation in ascospores of Neurospora and questions of terminology. Bull Torrey Bot Club 84:182–188, doi:10.2307/2482891
   Google Scholar
• HagenFCeresiniPCPolacheckIMaHvan NieuwerburghFGabaldónTKaganSPursallERHoogveldHLvan IerselLJJKlauGWKelkSMStougieLBartlettKHVoelzKPryszczLPCastañedaELazeraMMeyerWDeforceDMeisJFMayRCKlaassenCHWBoekhoutT. 2013. Ancient dispersal of the human fungal pathogen Cryptococcus gattii from the Amazon rainforest. PLoS One 8:e71148, doi:10.1371/journal.pone.0071148
   PubMed Web of Science ®Google Scholar
• HeitmanJKronstadJWTaylorJWCasseltonLA. 2007. Sex in fungi: molecular determination and evolutionary implications. Washington, DC: ASM Press. 542 p.
   Google Scholar
• HenkDAShahar-GolanRDeviKRBoyceKJZhanNFedorovaNDNiermanWCHsuehPRYuenKYSieuTPMKinhNVWertheimHBakerSGDayJNVanittanakomNBignellEMAndrianopoulosAFischerMC. 2012. Clonality despite sex: the evolution of host-associated sexual neighborhoods in the pathogenic fungus Penicillium marneffei. PLoS Pathog 8:e1002851, doi:10.1371/journal.ppat.1002851
   Google Scholar
• HerediaGReyesMAriasRMBillGF. 2001. Talaromyces ocotl sp. nov. and observations on T. rotundus from conifer forest soils of Veracruz state, Mexico. Mycologia 93:528–540, doi:10.2307/3761738
   Web of Science ®Google Scholar
• HornBWMooreGGCarboneI. 2009a. Sexual reproduction in Aspergillus flavus. Mycologia 101:423–429, doi:10.3852/09-011
   PubMed Web of Science ®Google Scholar
• HornBWRamirez-PradoJHCarboneI. 2009b. Sexual reproduction and recombination in the aflatoxin-producing fungus Aspergillus parasiticus. Fungal Genet Biol 46:169–175, doi:10.1016/j.fgb.2008.11.004
   PubMed Web of Science ®Google Scholar
• HoubrakenJDyerPS. 2015. Induction of the sexual cycle in filamentous Ascomycetes. In: van den BergMAMaruthachalamK, eds. Genetic transformation systems in fungi. Cham, Switzerland: Springer International Publishing. p 23–46.
   Google Scholar
• HoubrakenJSamsonRA. 2011. Phylogeny of Penicillium and the segregation of Trichocomaceae into three families. Stud Mycol 70:1–51, doi:10.3114/sim.2011.70.01
   PubMed Web of Science ®Google Scholar
• HoubrakenJVargaJRico-MunozEJohnsonSSamsonRA. 2008. Sexual reproduction as the cause of heat resistance in the food spoilage fungus Byssochlamys spectabilis (anamorph Paecilomyces variotii). Appl Environ Microbiol 74:1613–1619, doi:10.1128/AEM.01761-07
   PubMed Web of Science ®Google Scholar
• HusonDHBryantD. 2006. Application of phylogenetic networks in evolutionary studies. Mol Biol Evol 23:254–267, doi:10.1093/molbev/msj030
   PubMed Web of Science ®Google Scholar
• LindeCCZalaMCeccarelliSMcDonaldBA. 2003. Further evidence for sexual reproduction in Rhynchosporium secalis based on distribution and frequency of mating-type alleles. Fungal Genet Biol 40:115–125, doi:10.1016/S1087-1845(03)00110-5
   PubMed Web of Science ®Google Scholar
• LoBuglioKFPittJITaylorJW. 1993. Phylogenetic analysis of two ribosomal DNA regions indicates multiple independent losses of a sexual Talaromyces state among asexual Penicillium species in subgenus Biverticillium. Mycologia 85:592–604, doi:10.2307/3760506
   Web of Science ®Google Scholar
• López-VillavicencioMAguiletaGGiraudTde VienneDMLacosteSCoulouxADupontJ. 2010. Sex in Penicillium: combined phylogenetic and experimental approaches. Fungal Genet Biol 47:693–706, doi:10.1016/j.fgb.2010.05.002
   Google Scholar
• LuXPGuiYJXiaoBGLiYTongZJLiuYBaiXFWuWRXiaLHuttnerEKilianALongJiangF. 2013. Development of DArT markers for a linkage map of flue-cured tobacco. Chin Sci Bull 58:641–648, doi:10.1007/s11434-012-5453-z
   Google Scholar
• McNeillJBarrieFFBuckWRDemoulinVGreuterWHawksworthDLHerendeenPSKnappSMarholdKPradoJvan ReineWFPSmithGFWiersemaJHTurlandNJ. 2012. International Code of Nomenclature for algae, fungi and plants (Melbourne Code). Koeltz Scientific Books, Königstein. Regnum vegetabile No. 154.
   Google Scholar
• O’GormanCMFullerHTDyerPS. 2009. Discovery of a sexual cycle in the opportunistic fungal pathogen Aspergillus fumigatus. Nature 457:471–474, doi:10.1038/nature07528
   Google Scholar
• OgawaHSugiyamaJ. 2000. Evolutionary relationships of the cleistothecial genera with Penicillium, Geosmithia, Merimbla and Sarophorum anamorphs as inferred from 18S rDNA sequence divergence. In: SamsonRAPittJI, eds. Integration of modern taxonomic methods for Penicillium and Aspergillus classification. Amsterdam, the Netherlands: Harwood Academic Publishers. p 149–161.
   Google Scholar
• OgawaHYoshimuraASugiyamaJ. 1997. Polyphyletic origins of species of the anamorphic genus Geosmithia and the relationships of the cleistothecial genera: evidence from 18S, 5S and 28S rDNA sequence analyses. Mycologia 89:756–771, doi:10.2307/3761132
   Web of Science ®Google Scholar
• PetersonSW. 2000. Phylogenetic analysis of Penicillium species based on ITS and LSU-rDNA nucleotide sequences. In: SamsonRAPittJ, eds. Integration of modern taxonomic for Penicillium and Aspergillus classification. Amsterdam: Harwood Academic Publishers. p 163–178.
   Google Scholar
• PittJI. 1980. The genus Penicillium and its teleomorphic states Eupenicillium and Talaromyces. London: Academic Press. 634 p.
   Google Scholar
• RajuNBPerkinsDD. 1994. Diverse programs of ascus development in pseudohomothallic species of Neurospora, Gelasinospora, and Podospora. Dev Genet 15:104–118, doi:10.1002/dvg.1020150111
   Google Scholar
• RoparsJDupontJFontanillasERodríguez de la VegaRCMalagnacFCotonMGiraudTLópez-VillavicencioM. 2012. Sex in cheese: evidence for sexuality in the fungus Penicillium roqueforti. PLoS One 7:e49665, doi:10.1371/journal.pone.0049665
   Web of Science ®Google Scholar
• RoparsJLópez-VillavicencioMDupontJSnircAGillotGCotonMJanyJ-LCotonEGiraudT. 2014. Induction of sexual reproduction and genetic diversity in the cheese fungus Penicillium roqueforti. Evol Appl 7:433–441, doi:10.1111/eva.12140
   Google Scholar
• SamsonRAYilmazNHoubrakenJSpierenburgHSeifertKAPetersonSWVargaJFrisvadJC. 2011. Phylogeny and nomenclature of the genus Talaromyces and taxa accommodated in Penicillium subgenus Biverticillium. Stud Mycol 70:159–183, doi:10.3114/sim.2011.70.04
   PubMed Web of Science ®Google Scholar
• TakadaMUdagawaS. 1988. A new species of heterothallic Talaromyces. Mycotaxon 31:417–425.
   Google Scholar
• VisagieCMHoubrakenJFrisvadJCHongS-BKlaassenCHWPerroneGSeifertKAVargaJYaguchiTSamsonRA. 2014. Identification and nomenclature of the genus Penicillium. Stud Mycol 78:343–373, doi:10.1016/j.simyco.2014.09.001
   PubMed Web of Science ®Google Scholar
• VisagieCMLlimonaXVilaJLouis-SeizeGSeifertKA. 2012. Phylogenetic relationships and the newly discovered sexual state of Talaromyces flavovirens comb. nov. Mycotaxon 122:399–411, doi:10.5248/122.399
   Google Scholar
• VosPHogersRBleekerMReijansMvan de LeeTHornesMFrijtersAPotJPelemanJKuiperMZabeauM. 1995. AFLP: a new technique for DNA fingerprinting. Nucleic Acids Res 23:4407–4414, doi:10.1093/nar/23.21.4407
   PubMed Web of Science ®Google Scholar
• WangLZhuangWY. 2007. Phylogenetic analyses of penicillia based on partial calmodulin gene sequences. Biosystems 88:113–126, doi:10.1016/j.biosystems.2006.04.008
   Web of Science ®Google Scholar
• WooPCYChongKTKTseHCaiJJLauCCYZhouACLauSKPYuenK-Y. 2006. Genomic and experimental evidence for a potential sexual cycle in the pathogenic thermal dimorphic fungus Penicillium marneffei. FEBS Lett 580:3409–3416, doi:10.1016/j.febslet.2006.05.014
   PubMed Web of Science ®Google Scholar
• YilmazNHoubrakenJHoekstraESFrisvadJCVisagieCMSamsonRA. 2012. Delimitation and characterization of Talaromyces purpurogenus and related species. Persoonia 29:39–54, doi:10.3767/003158512X659500
   Google Scholar
• YilmazNVisagieCMHoubrakenJFrisvadJCSamsonRA. 2014. Polyphasic taxonomy of the genus Talaromyces. Stud Mycol 78:175–341, doi:10.1016/j.simyco.2014.08.001
   PubMed Web of Science ®Google Scholar
• YunS-HBerbeeMLYoderOCTurgeonBG. 1999. Evolution of the fungal self-fertile reproductive life style from self-sterile ancestors. Proc Nat Acad Sci USA 96: 5592–5597, doi: 10.1073/pnas.96.10.5592
   PubMed Web of Science ®Google Scholar