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Original Articles

Two new hyaline-ascospored species of Trichoderma and their phylogenetic positions

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Pages 205-214 | Received 04 Jun 2015, Accepted 22 Oct 2016, Published online: 20 Jan 2017

Literature Cited

  • AlmeidaFBCerqueiraFMSilvaRNUlhoaCJLimaAL. 2007. Mycoparasitism studies of Trichoderma harzianum strains against Rhizoctonia solani: evaluation of coiling and hydrolytic enzyme production. Biotechnol Lett 29:1189–1193, doi:10.1007/s10529-007-9372-z
  • CarboneIKohnLM. 1999. A method for designing primer sets for speciation studies in filamentous ascomycetes. Mycologia 91:553–556, doi:10.2307/3761358
  • ChaverriPBranco-RochaFJaklitschWMGazisRDegenkolbTSamuelsGJ. 2015. Systematics of the Trichoderma harzianum species complex and the reidentification of commercial biocontrol strains. Mycologia 107:558–590, doi:10.3852/14-147
  • ChaverriPCastleburyLAOvertonBESamuelsGJ. 2003. Hypocrea/Trichoderma: species with conidiophore elongations and green conidia. Mycologia 95:1100–1140.
  • ChaverriPSamuelsGJ. 2003. Hypocrea/Trichoderma (Ascomycota, Hypocreales, Hypocreaceae): species with green ascospores. Stud Mycol 48:1–116.
  • ChengCHYangCAPengKC. 2012. Antagonism of Trichoderma harzianum ETS 323 on Botrytis cinerea mycelium in culture conditions. Phytopathology 102:1054–1063, doi:10.1094/PHYTO-11-11-0315
  • CunninghamCW. 1997. Can three incongruence tests predict when data should be combined? Mol Biol Evol 14:733–740, doi:10.1093/oxfordjournals.molbev.a025813
  • DegenkolbTvon DöhrenHNielsenKFSamuelsGJBrücknerH. 2008. Recent advances and future prospects in peptaibiotics, hydrophobin and mycotoxin research and their importance for chemotaxonomy of Trichoderma and Hypocrea. Chem Biodivers 5:671–680, doi:10.1002/cbdv.200890064
  • HallTA. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41:95–98, doi:10.1021/bk-1999-0734.ch008
  • HarmanGEHowellCRViterboAChetILoritoM. 2004. Trichoderma species—opportunistic, avirulent plant symbionts. Nat Rev Microbiol 2:43–56.
  • JaklitschWM. 2009. European species of Hypocrea I. The green-spored species. Stud Mycol 63:1–91, doi:10.3114/sim.2009.63.01
  • JaklitschWM. 2011. European species of Hypocrea II: species with hyaline ascospores. Fungal Divers 48:1–247, doi:10.3852/15-144
  • JaklitschWMKomonMKubicekCPDruzhininaIS. 2005. Hypocrea voglmayrii sp. nov. from the Austrian Alps represents a new phylogenetic clade in Hypocrea/Trichoderma. Mycologia 97:1365–1378, doi:10.3852/mycologia.97.6.1365
  • JaklitschWMVoglmayrH. 2012. Hypocrea britdaniae and H. foliicola: two remarkable new European species. Mycologia 104:1213–1221, doi:10.3852/11-429
  • JaklitschWMVoglmayrH. 2013. New combinations in Trichoderma (Hypocreaceae, Hypocreales) Mycotaxon 126:143–156. doi:10.5248/126.143
  • JaklitschWMVoglmayrH. 2015. Biodiversity of Trichoderma (Hypocreaceae) in southern Europe and Macaronesia. Stud Mycol 80:1–87, doi:10.1016/j.simyco.2014.11.001
  • KimCSShirouzuTNakagiriASotomeKMaekawaN. 2013. Trichoderma eijii and T. pseudolacteum, two new species from Japan. Mycol Prog 12:739–753, doi:10.1007/s11557-012-0886-y
  • KimCSShirouzuTNakagiriASotomeKNagasawaEMaekawaN. 2012a. Trichoderma mienum sp nov. isolated from mushroom farms in Japan. Antonie van Leeuwenhoek 102:629–641, doi:10.1007/s10482-012-9758-3
  • KimCSYuSHNakagiriAShirouzuTSotomeKKimSCMaekawaN. 2012b. Re-evaluation of Hypocrea pseudogelatinosa and H. pseudostraminea isolated from shiitake mushroom (Lentinula edodes) cultivation in Korea and Japan. Plant Pathol J 28:341–356, doi:10.5423/PPJ.OA.05.2012.0068
  • KredicsLAntalZDócziIManczingerLKeveiFNagyE. 2003. Clinical importance of the genus Trichoderma. Acta Microbiol Immunol Hung 50:105–117.
  • KuhlsKLieckfeldtEBörnerTGuéhoE. 1999. Molecular re-identification of human pathogenic Trichoderma isolates as Trichoderma longibrachiatum and Trichoderma citrinoviride. Med Mycol 37:25–33, doi:10.1111/j.1365-280X.1999.00197.x
  • LiuYJWhelenSHallBD. 1999. Phylogenetic relationships among ascomycetes: evidence from an RNA polymerase II subunit. Mol Biol Evol 16:1799–1808.
  • LopesFACSteindorffASGeraldineAMBrandaoRSMonteiroVNLoboMCoelhoASGUlhoaCJSilvaRN. 2012. Biochemical and metabolic profiles of Trichoderma strains isolated from common bean crops in the Brazilian Cerrado and potential antagonism against Sclerotinia sclerotiorum. Fungal Biol 116:815–824, doi:10.1016/j.funbio.2012.04.015
  • MaddisonWPMaddisonDR. 2011. Mesquite: a modular system for evolutionary analysis 2.75. http://mesquiteproject.org
  • MukherjeePKSinghUSHorwitzBASchmollMMukherjeeM. 2013. Trichoderma: biology and applications. Wallingford: CABI.
  • NylanderJAA. 2004. MrModeltest 2. Program distributed by the author. Evolutionary Biology Centre, Uppsala University.
  • OvertonBEStewartELGeiserDM. 2006a. Taxonomy and phylogenetic relationships of nine species of Hypocrea with anamorphs assignable to Trichoderma section Hypocreanum. Stud Mycol 56:39–65, doi:10.3114/sim.2006.56.02
  • OvertonBEStewartELGeiserDMWennerNGJaklitschWM. 2006b. Systematics of Hypocrea citrina and allies. Stud Mycol 56:1–38, doi:10.3114/sim.2006.56.01
  • PageRDM. 1996. TreeView: an application to display phylogenetic trees on personal computers. Comput Appl Biosci 12:357–358.
  • ParkMSBaeKSYuSH. 2006. Two new species of Trichoderma associated with green mold of oyster mushroom cultivation in Korea. Mycobiology 34:111–113, doi:10.4489/MYCO.2006.34.3.111
  • ParkMSOhSYChoHJFongJJCheonWJLimYW. 2014. Trichoderma songyi sp. nov., a new species associated with the pine mushroom (Tricholoma matsutake). Antonie van Leeuwenhoek 106:593–603, doi:10.1007/s10482-014-0230-4
  • RonquistFHuelsenbeckJP. 2003. MrBayes 3: bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572–1574.
  • RossmanAYSeifertKASamuelsGJMinnisAMSchroersHJLombardLCrousPWPõldmaaKCannonPFSummerbellRCGeiserDMZhuangWYHirookaYHerreraCSalgado-SalazarCChaverriP. 2013. Genera in the Bionectriaceae, Hypocreaceae and Nectriaceae (Hypocreales) proposed for acceptance or rejection. IMA Fungus 4:41–51, doi:10.5598/imafungus.2013.04.01.05
  • SamuelsGJ. 1996. Trichoderma: a review of biology and systematic of the genus. Microbiol Res 100:923–935, doi:10.1016/S0953-7562(96)80043-8
  • SamuelsGJDoddSLGamsWCastleburyLAPetriniO. 2002. Trichoderma species associated with the green mold epidemic of commercially grown Agaricus bisporus. Mycologia 94:146–170, doi:10.2307/3761854
  • SamuelsGJDoddSLLuBSPetriniOSchroersHJDruzhininaIS. 2006. The Trichoderma koningii aggregate species. Stud Mycol 56:67–133, doi:10.3114/sim.2006.56.03
  • SamuelsGJPetriniOKuhlsKLieckfeldtEKubicekCP. 1998. The Hypocrea schweinitzii complex and Trichoderma sect. Longibrachiatum. Stud Mycol 41:1–54.
  • SchusterASchmollM. 2010. Biology and biotechnology of Trichoderma. Appl Microbiol Biotechnol 87:787–799, doi:10.1007/s00253-010-2632-1
  • StamatakisE. 2006. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22:2688–2690.
  • SwoffordDL. 2002. PAUP 4.0b10: phylogenetic analysis using parsimony (* and other methods). Sunderland, Massachusetts: Sinauer Associates.
  • ThompsonJDGibsonTJPlewniakFJeanmouginFHigginsDG. 1997. The Clustal X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876–4882, doi:10.1093/nar/25.24.4876
  • WangLZhuangWY. 2004. Designing primer sets for amplification of partial calmodulin genes from penicillia. Mycosystema 23:466–473.
  • WhiteTJBrunsTLeeSTaylorJ. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: InnisMAGelfandDHSniskyJJWhiteTJ, eds. PCR protocols: a guide to methods and applications. London: Academic Press. p 315–322.
  • YabukiTMiyazakiKOkudaT. 2014. Japanese species of the Longibrachiatum clade of Trichoderma. Mycoscience 55:196–212.
  • ZhangGZYangHTZhangXJHuJDGuoKHuangYJLiJS. 2014. A checklist of known species of Trichoderma. Mycosystema 33:1210–1230 (in Chinese)
  • ZhuZXZhuangWY. 2014. Two new species of Trichoderma (Hypocreaceae) from China. Mycosystema 33:1168–1174.
  • ZhuZXZhuangWY. 2015a. Three new species of Trichoderma with hyaline ascospores from China. Mycologia 107:328–345, doi:10.3852/14-141
  • ZhuZXZhuangWY. 2015b. Trichoderma (Hypocrea) species with green ascospores from China. Persoonia 34:113–129, doi:10.3767/003158515X68673

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