57
Views
0
CrossRef citations to date
0
Altmetric
Article

Evolution of transcriptome profiles during muscle development in Casertana and cosmopolite pig breeds

, , , , &
Pages 66-68 | Published online: 07 Mar 2016

References

  • Byrne, K.A., Wang, Y.H., Lehnert, S.A., Harper, G.S., McWilliam, S.M., Bruce, H.L., Reverter, A., 2005. Gene expression profiling of muscle tissue in Brahman steers during nutritional restriction. J. Anim. Sci. 83:1–12.
  • Conesa, A., Nueda, M.J., Talon, M., 2006. maSigPro: a method to identify significantly differential expression profiles in time-course microarray experiments. Bioinformatics. 22:1096–1102.
  • Dal Monego, S., Colitti, M., Pallavicini, A., D’Andrea, M., Pilla, F., Graziosi, G., Stefanon, B., 2007. Evaluation of gene expression profiles of pig skeletal muscle in response to energy content of the diets using human microarrays. Ital. J. Anim. Sci. 6:45–59.
  • Gentleman, R.C., Carey, V.J., Bates, D.M., Bolstad, B., Dettling, M., Dudoit, S., Ellis, B., Gautier, L., Ge, Y., Gentry, J., Hornik, K., Hothorn, T., Huber, W., Iacus, S., Irizarry, R., Leisch, F., Li, C., Maechler, M., Rossini, A.J., Sawitzki, G., Smith, C., Smyth, G., Tierney, L., Yang, J.Y., Zhang, J., 2004. Bioconductor: open software development for computational biology and bioinformatics. Genome Biol. 5:R80.
  • Kerr, M.K., Churchill, G.A., 2001. Experimental design for gene expression microarrays. Biostatistics 2:183- 201.
  • Lemkin, P.F., Thornwall, G.C., Walton, K.D., Hennighausen, L., 2000. The microarray Explorer tool for data mining of cDNA microarrays: application for the mammary gland. Nucleic Acids Res. 28:4452–4459.
  • Pietrolà, E., Pilla, F., Maiorano, G, Matassino, D., 2006. Morphological traits, reproductive and productive performances of Casertana pigs reared outdoors. Ital. J. Anim. Sci. 5:139–146.
  • Reiner, A., Yekutieli, D., Benjamini, Y., 2003. Identifying differentially expressed genes using false discovery rate controlling procedures. Bioinformatics. 19:368–375.
  • Townsend, J.P., 2003. Multifactorial experimentaldesign and the transitivity of ratios with spotted DNA microarrays. BMC Genomics. 4:41–49.
  • Yang, Y.H., Dudoit, S., Luu, P., Lin, D.M., Peng, V., Ngai, J., Speed, T.P., 2002. Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation. Nucleic Acids Res. 30:e15.

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.