1,944
Views
53
CrossRef citations to date
0
Altmetric
Research Paper

Differences in microbial signatures between rectal mucosal biopsies and rectal swabs

, , , , , , , & show all
Pages 530-535 | Published online: 11 Oct 2012

References

  • Sobhani I, Tap J, Roudot-Thoraval F, Roperch JP, Letulle S, Langella P, et al. Microbial dysbiosis in colorectal cancer (CRC) patients. PLoS One 2011; 6:e16393; http://dx.doi.org/10.1371/journal.pone.0016393; PMID: 21297998
  • Shen XJ, Rawls JF, Randall T, Burcal L, Mpande CN, Jenkins N, et al. Molecular characterization of mucosal adherent bacteria and associations with colorectal adenomas. Gut Microbes 2010; 1:138 - 47; http://dx.doi.org/10.4161/gmic.1.3.12360; PMID: 20740058
  • Gersemann M, Wehkamp J, Stange EF. Innate immune dysfunction in inflammatory bowel disease. J Intern Med 2012; 271:421 - 8; http://dx.doi.org/10.1111/j.1365-2796.2012.02515.x; PMID: 22324936
  • Carroll IM, Chang YH, Park J, Sartor RB, Ringel Y. Luminal and mucosal-associated intestinal microbiota in patients with diarrhea-predominant irritable bowel syndrome. Gut Pathog 2010; 2:19; http://dx.doi.org/10.1186/1757-4749-2-19; PMID: 21143915
  • Turnbaugh PJ, Ley RE, Mahowald MA, Magrini V, Mardis ER, Gordon JI. An obesity-associated gut microbiome with increased capacity for energy harvest. Nature 2006; 444:1027 - 31; http://dx.doi.org/10.1038/nature05414; PMID: 17183312
  • Brown CT, Davis-Richardson AG, Giongo A, Gano KA, Crabb DB, Mukherjee N, et al. Gut microbiome metagenomics analysis suggests a functional model for the development of autoimmunity for type 1 diabetes. PLoS One 2011; 6:e25792; http://dx.doi.org/10.1371/journal.pone.0025792; PMID: 22043294
  • Turnbaugh PJ, Ley RE, Hamady M, Fraser-Liggett CM, Knight R, Gordon JI. The human microbiome project. Nature 2007; 449:804 - 10; http://dx.doi.org/10.1038/nature06244; PMID: 17943116
  • Savage DC. Microbial ecology of the gastrointestinal tract. Annu Rev Microbiol 1977; 31:107 - 33; http://dx.doi.org/10.1146/annurev.mi.31.100177.000543; PMID: 334036
  • Sonnenburg JL, Angenent LT, Gordon JI. Getting a grip on things: how do communities of bacterial symbionts become established in our intestine?. Nat Immunol 2004; 5:569 - 73; http://dx.doi.org/10.1038/ni1079; PMID: 15164016
  • Goto Y, Kiyono H. Epithelial barrier: an interface for the cross-communication between gut flora and immune system. Immunol Rev 2012; 245:147 - 63; http://dx.doi.org/10.1111/j.1600-065X.2011.01078.x; PMID: 22168418
  • n.d.) ACS. Colorectal Cancer Facts & Figures. In: Society AC, ed., 2011:1-30.
  • Tap J, Mondot S, Levenez F, Pelletier E, Caron C, Furet JP, et al. Towards the human intestinal microbiota phylogenetic core. Environ Microbiol 2009; 11:2574 - 84; http://dx.doi.org/10.1111/j.1462-2920.2009.01982.x; PMID: 19601958
  • Sanapareddy N, Legge RM, Jovov B, McCoy A, Burcal L, Araujo-Perez F, et al. Increased rectal microbial richness is associated with the presence of colorectal adenomas in humans. ISME J 2012; http://dx.doi.org/10.1038/ismej.2012.43; PMID: 22622349
  • Durbán A, Abellán JJ, Jiménez-Hernández N, Ponce M, Ponce J, Sala T, et al. Assessing gut microbial diversity from feces and rectal mucosa. Microb Ecol 2011; 61:123 - 33; http://dx.doi.org/10.1007/s00248-010-9738-y; PMID: 20734040
  • Hong PY, Croix JA, Greenberg E, Gaskins HR, Mackie RI. Pyrosequencing-based analysis of the mucosal microbiota in healthy individuals reveals ubiquitous bacterial groups and micro-heterogeneity. PLoS One 2011; 6:e25042; http://dx.doi.org/10.1371/journal.pone.0025042; PMID: 21966408
  • DeBourcy AC, Lichtenberger S, Felton S, Butterfield KT, Ahnen DJ, Denberg TD. Community-based preferences for stool cards versus colonoscopy in colorectal cancer screening. J Gen Intern Med 2008; 23:169 - 74; http://dx.doi.org/10.1007/s11606-007-0480-1; PMID: 18157581
  • Wolf RL, Basch CE, Brouse CH, Shmukler C, Shea S. Patient preferences and adherence to colorectal cancer screening in an urban population. Am J Public Health 2006; 96:809 - 11; http://dx.doi.org/10.2105/AJPH.2004.049684; PMID: 16571715
  • Chen W, Liu F, Ling Z, Tong X, Xiang C. Human intestinal lumen and mucosa-associated microbiota in patients with colorectal cancer. PLoS One 2012; 7:e39743; http://dx.doi.org/10.1371/journal.pone.0039743; PMID: 22761885
  • Eckburg PB, Bik EM, Bernstein CN, Purdom E, Dethlefsen L, Sargent M, et al. Diversity of the human intestinal microbial flora. Science 2005; 308:1635 - 8; http://dx.doi.org/10.1126/science.1110591; PMID: 15831718
  • Lepage P, Seksik P, Sutren M, de la Cochetière MF, Jian R, Marteau P, et al. Biodiversity of the mucosa-associated microbiota is stable along the distal digestive tract in healthy individuals and patients with IBD. Inflamm Bowel Dis 2005; 11:473 - 80; http://dx.doi.org/10.1097/01.MIB.0000159662.62651.06; PMID: 15867587
  • Zoetendal EG, von Wright A, Vilpponen-Salmela T, Ben-Amor K, Akkermans AD, de Vos WM. Mucosa-associated bacteria in the human gastrointestinal tract are uniformly distributed along the colon and differ from the community recovered from feces. Appl Environ Microbiol 2002; 68:3401 - 7; http://dx.doi.org/10.1128/AEM.68.7.3401-3407.2002; PMID: 12089021
  • Paju S, Bernstein JM, Haase EM, Scannapieco FA. Molecular analysis of bacterial flora associated with chronically inflamed maxillary sinuses. J Med Microbiol 2003; 52:591 - 7; http://dx.doi.org/10.1099/jmm.0.05062-0; PMID: 12808082
  • Seetaram SP, Liu R, Ramotar K, Harder CJ. Real-time PCR detection of MRSA. Spartan Biosciences: Application Notes 2008; AN0007 Ver. 1.2.
  • Rawls JF, Mahowald MA, Goodman AL, Trent CM, Gordon JI. In vivo imaging and genetic analysis link bacterial motility and symbiosis in the zebrafish gut. Proc Natl Acad Sci U S A 2007; 104:7622 - 7; http://dx.doi.org/10.1073/pnas.0702386104; PMID: 17456593
  • Abdo Z, Schüette UM, Bent SJ, Williams CJ, Forney LJ, Joyce P. Statistical methods for characterizing diversity of microbial communities by analysis of terminal restriction fragment length polymorphisms of 16S rRNA genes. Environ Microbiol 2006; 8:929 - 38; http://dx.doi.org/10.1111/j.1462-2920.2005.00959.x; PMID: 16623749

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.