A PHD in histone language

References

• Ma Z, Bielenberg DG, Brown KM, Lynch JP. Regulation of root hair density by phosphorus availability in Arabidopsis thaliana. Plant Cell Environ 2001; 24:459 - 67; http://dx.doi.org/10.1046/j.1365-3040.2001.00695.x
   Web of Science ®Google Scholar
• Müller M, Schmidt W. Environmentally induced plasticity of root hair development in Arabidopsis. Plant Physiol 2004; 134:409 - 19; http://dx.doi.org/10.1104/pp.103.029066; PMID: 14730071
   PubMed Web of Science ®Google Scholar
• Chandrika NN, Sundaravelpandian K, Yu SM, Schmidt W. ALFIN-LIKE 6 is involved in root hair elongation during phosphate deficiency in Arabidopsis. New Phytol 2013; In press http://dx.doi.org/10.1111/nph.12194; PMID: 23432399
   PubMed Web of Science ®Google Scholar
• Sims RJ 3rd, Millhouse S, Chen CF, Lewis BA, Erdjument-Bromage H, Tempst P, et al. Recognition of trimethylated histone H3 lysine 4 facilitates the recruitment of transcription postinitiation factors and pre-mRNA splicing. Mol Cell 2007; 28:665 - 76; http://dx.doi.org/10.1016/j.molcel.2007.11.010; PMID: 18042460
   PubMed Web of Science ®Google Scholar
• van Dijk K, Ding Y, Malkaram S, Riethoven JJ, Liu R, Yang J, et al. Dynamic changes in genome-wide histone H3 lysine 4 methylation patterns in response to dehydration stress in Arabidopsis thaliana.. BMC Plant Biol 2010; 10:238; http://dx.doi.org/10.1186/1471-2229-10-238; PMID: 21050490
   PubMed Web of Science ®Google Scholar
• Pavri R, Zhu B, Li GH, Trojer P, Mandal S, Shilatifard A, et al. Histone H2B monoubiquitination functions cooperatively with FACT to regulate elongation by RNA polymerase II. Cell 2006; 125:703 - 17; http://dx.doi.org/10.1016/j.cell.2006.04.029; PMID: 16713563
   PubMed Web of Science ®Google Scholar
• Sims RJ 3rd, Reinberg D. Histone H3 Lys 4 methylation: caught in a bind?. Genes Dev 2006; 20:2779 - 86; http://dx.doi.org/10.1101/gad.1468206; PMID: 17043307
   PubMed Web of Science ®Google Scholar
• Wysocka J, Swigut T, Milne TA, Dou YL, Zhang X, Burlingame AL, et al. WDR5 associates with histone H3 methylated at K4 and is essential for H3 K4 methylation and vertebrate development. Cell 2005; 121:859 - 72; http://dx.doi.org/10.1016/j.cell.2005.03.036; PMID: 15960974
   PubMed Web of Science ®Google Scholar
• Lee WY, Lee D, Chung WI, Kwon CS. Arabidopsis ING and Alfin1-like protein families localize to the nucleus and bind to H3K4me3/2 via plant homeodomain fingers. Plant J 2009; 58:511 - 24; http://dx.doi.org/10.1111/j.1365-313X.2009.03795.x; PMID: 19154204
   PubMed Web of Science ®Google Scholar
• Peña PV, Davrazou F, Shi X, Walter KL, Verkhusha VV, Gozani O, et al. Molecular mechanism of histone H3K4me3 recognition by plant homeodomain of ING2. Nature 2006; 442:100 - 3; PMID: 16728977
   PubMed Web of Science ®Google Scholar
• Shi X, Kachirskaia I, Walter KL, Kuo JH, Lake A, Davrazou F, et al. Proteome-wide analysis in Saccharomyces cerevisiae identifies several PHD fingers as novel direct and selective binding modules of histone H3 methylated at either lysine 4 or lysine 36. J Biol Chem 2007; 282:2450 - 5; http://dx.doi.org/10.1074/jbc.C600286200; PMID: 17142463
   PubMed Web of Science ®Google Scholar
• Aasland R, Gibson TJ, Stewart AF. The PHD finger: implications for chromatin-mediated transcriptional regulation. Trends Biochem Sci 1995; 20:56 - 9; http://dx.doi.org/10.1016/S0968-0004(00)88957-4; PMID: 7701562
   PubMed Web of Science ®Google Scholar
• Bienz M. The PHD finger, a nuclear protein-interaction domain. Trends Biochem Sci 2006; 31:35 - 40; http://dx.doi.org/10.1016/j.tibs.2005.11.001; PMID: 16297627
   PubMed Web of Science ®Google Scholar
• Hazzalin CA, Mahadevan LC. Dynamic acetylation of all lysine 4-methylated histone H3 in the mouse nucleus: analysis at c-fos and c-jun. PLoS Biol 2005; 3:e393; http://dx.doi.org/10.1371/journal.pbio.0030393; PMID: 16262446
   PubMedGoogle Scholar
• Hsu DW, Chubb JR, Muramoto T, Pears CJ, Mahadevan LC. Dynamic acetylation of lysine-4-trimethylated histone H3 and H3 variant biology in a simple multicellular eukaryote. Nucleic Acids Res 2012; 40:7247 - 56; http://dx.doi.org/10.1093/nar/gks367; PMID: 22600736
   PubMed Web of Science ®Google Scholar
• Chen LT, Luo M, Wang YY, Wu KQ. Involvement of Arabidopsis histone deacetylase HDA6 in ABA and salt stress response. J Exp Bot 2010; 61:3345 - 53; http://dx.doi.org/10.1093/jxb/erq154; PMID: 20519338
   PubMed Web of Science ®Google Scholar