A systems biology approach to dissect the contribution of brassinosteroid and Auxin hormones to vascular patterning in the shoot of Arabidopsis thaliana

References

• Esau K. Virus-like particles in nuclei of phloem cells in spinach leaves infected with the curly top virus. J Ultrastruct Res 1977; 61:78 - 88
   PubMedGoogle Scholar
• Mahonen AP, Bishopp A, Higuchi M, Nieminen KM, Kinoshita K, Tormakangas K, et al. Cytokinin signaling and its inhibitor AHP6 regulate cell fate during vascular development. Science 2006; 311:94 - 98
   PubMed Web of Science ®Google Scholar
• Esau K. Fixation Images of sieve element plastids in beta. Proc Natl Acad Sci USA 1965; 54:429 - 437
   PubMed Web of Science ®Google Scholar
• Altamura MM, Possenti M, Matteucci A, Baima S, Ruberti I, Morelli G. Development of the vascular system in the inflorescence stem of Arabidopsis. New Phytologist 2001; 151:381 - 389
   Web of Science ®Google Scholar
• Dettmer J, Elo A, Helariutta Y. Hormone interactions during vascular development. Plant Mol Biol 2009; 69:347 - 360
   PubMed Web of Science ®Google Scholar
• Galweiler L, Guan C, Muller A, Wisman E, Mendgen K, Yephremov A, et al. Regulation of polar auxin transport by AtPIN1 in Arabidopsis vascular tissue. Science 1998; 282:2226 - 2230
   PubMed Web of Science ®Google Scholar
• Mattsson J, Sung ZR, Berleth T. Responses of plant vascular systems to auxin transport inhibition. Development 1999; 126:2979 - 2991
   PubMed Web of Science ®Google Scholar
• Choe S, Fujioka S, Noguchi T, Takatsuto S, Yoshida S, Feldmann KA. Overexpression of DWARF4 in the brassinosteroid biosynthetic pathway results in increased vegetative growth and seed yield in Arabidopsis. Plant J 2001; 26:573 - 582
   PubMed Web of Science ®Google Scholar
• Savaldi-Goldstein S, Peto C, Chory J. The epidermis both drives and restricts plant shoot growth. Nature 2007; 446:199 - 202
   PubMed Web of Science ®Google Scholar
• Ibañes M, Fabregas N, Chory J, Caño-Delgado AI. Brassinosteroid signaling and auxin transport are required to establish the periodic pattern of Arabidopsis shoot vascular bundles. Proc Natl Acad Sci USA 2009; 106:13630 - 13635
   PubMed Web of Science ®Google Scholar
• Fukuda H. Tracheary element differentiation. Plant Cell 1997; 9:1147 - 1156
   PubMed Web of Science ®Google Scholar
• Reinhardt D. Vascular patterning: more than just auxin?. Curr Biol 2003; 13:485 - 487
   PubMed Web of Science ®Google Scholar
• Blilou I, Xu J, Wildwater M, Willemsen V, Paponov I, Friml J, et al. The PIN auxin efflux facilitator network controls growth and patterning in Arabidopsis roots. Nature 2005; 433:39 - 44
   PubMed Web of Science ®Google Scholar
• Scarpella E, Marcos D, Friml J, Berleth T. Control of leaf vascular patterning by polar auxin transport. Genes Dev 2006; 20:1015 - 1027
   PubMed Web of Science ®Google Scholar
• Sachs T. The control of the patterned differentiation of vascular tissues. Advanced Botanical Research 1981; 9:151 - 262
   Web of Science ®Google Scholar
• Bayer EM, Smith RS, Mandel T, Nakayama N, Sauer M, Prusinkiewicz P, et al. Integration of transport-based models for phyllotaxis and midvein formation. Genes Dev 2009; 23:373 - 384
   PubMed Web of Science ®Google Scholar
• Wenzel CL, Schuetz M, Yu Q, Mattsson J. Dynamics of MONOPTEROS and PIN-FORMED1 expression during leaf vein pattern formation in Arabidopsis thaliana. Plant J 2007; 49:387 - 398
   PubMed Web of Science ®Google Scholar
• Scheres B, Xu J. Polar auxin transport and patterning: grow with the flow. Genes Dev 2006; 20:922 - 926
   PubMed Web of Science ®Google Scholar
• Przemeck GK, Mattsson J, Hardtke CS, Sung ZR, Berleth T. Studies on the role of the Arabidopsis gene MONOPTEROS in vascular development and plant cell axialization. Planta 1996; 200:229 - 237
   PubMed Web of Science ®Google Scholar
• Reinhardt D, Pesce ER, Stieger P, Mandel T, Baltensperger K, Bennett M, et al. Regulation of phyllotaxis by polar auxin transport. Nature 2003; 426:255 - 260
   PubMed Web of Science ®Google Scholar
• Benkova E, Michniewicz M, Sauer M, Teichmann T, Seifertova D, Jurgens G, et al. Local, efflux-dependent auxin gradients as a common module for plant organ formation. Cell 2003; 115:591 - 602
   PubMed Web of Science ®Google Scholar
• Jonsson H, Heisler MG, Shapiro BE, Meyerowitz EM, Mjolsness E. An auxin-driven polarized transport model for phyllotaxis. Proc Natl Acad Sci USA 2006; 103:1633 - 1638
   PubMed Web of Science ®Google Scholar
• Grieneisen VA, Xu J, Maree AF, Hogeweg P, Scheres B. Auxin transport is sufficient to generate a maximum and gradient guiding root growth. Nature 2007; 449:1008 - 1013
   Google Scholar
• Ulmasov T, Murfett J, Hagen G, Guilfoyle TJ. Aux/IAA proteins repress expression of reporter genes containing natural and highly active synthetic auxin response elements. Plant Cell 1997; 9:1963 - 1971
   PubMed Web of Science ®Google Scholar
• Zhao Y, Christensen SK, Fankhauser C, Cashman JR, Cohen JD, Weigel D, et al. A Role for Flavin Monooxygenase-Like Enzymes in Auxin Biosynthesis. Science 2001; 291:306 - 309
   PubMed Web of Science ®Google Scholar
• Yamamoto R, Fujioka S, Demura T, Takatsuto S, Yoshida S, Fukuda H. Brassinosteroid levels increase drastically prior to morphogenesis of tracheary elements. Plant Physiol 2001; 125:556 - 563
   PubMed Web of Science ®Google Scholar
• Nagata N, Asami T, Yoshida S. Brassinazole, an inhibitor of brassinosteroid biosynthesis, inhibits development of secondary xylem in cress plants (Lepidium sativum). Plant Cell Physiol 2001; 42:1006 - 1011
   PubMed Web of Science ®Google Scholar
• Szekeres M, Nemeth K, Koncz-Kalman Z, Mathur J, Kauschmann A, Altmann T, et al. Brassinosteroids rescue the deficiency of CYP90, a cytochrome P450, controlling cell elongation and de-etiolation in Arabidopsis. Cell 1996; 85:171 - 182
   PubMed Web of Science ®Google Scholar
• Caño-Delgado A, Yin Y, Yu C, Vafeados D, Mora-Garcia S, Cheng JC, et al. BRL1 and BRL3 are novel brassinosteroid receptors that function in vascular differentiation in Arabidopsis. Development 2004; 131:5341 - 5351
   PubMed Web of Science ®Google Scholar
• Choe S, Noguchi T, Fujioka S, Takatsuto S, Tissier CP, Gregory BD, et al. The Arabidopsis dwf7/ste1 mutant is defective in the delta7 sterol C-5 desaturation step leading to brassinosteroid biosynthesis. Plant Cell 1999; 11:207 - 221
   PubMed Web of Science ®Google Scholar
• Guo Y, Qin G, Gu H, Qu LJ. Dof5.6/HCA2, a Dof transcription factor gene, regulates interfascicular cambium formation and vascular tissue development in Arabidopsis. Plant Cell 2009; 21:3518 - 3534
   PubMed Web of Science ®Google Scholar
• Smith RS, Guyomarc'h S, Mandel T, Reinhardt D, Kuhlemeier C, Prusinkiewicz P. A plausible model of phyllotaxis. Proc Natl Acad Sci USA 2006; 103:1301 - 1306
   PubMed Web of Science ®Google Scholar
• Lee K, Avondo J, Morrison H, Blot L, Stark M, Sharpe J, et al. Visualizing plant development and gene expression in three dimensions using optical projection tomography. Plant Cell 2006; tpc.106.043042
   Web of Science ®Google Scholar
• Truernit E, Bauby H, Dubreucq B, Grandjean O, Runions J, Barthelemy J, et al. High-resolution whole-mount imaging of three-dimensional tissue organization and gene expression enables the study of phloem development and structure in Arabidopsis. Plant Cell 2008; 20:1494 - 1503
   PubMed Web of Science ®Google Scholar
• Kang J, Tang J, Donnelly P, Dengler N. Primary vascular pattern and expression of ATHB-8 in shoots of Arabidopsis. New Phytol 2003; 158:443 - 454
   Web of Science ®Google Scholar