54
Views
0
CrossRef citations to date
0
Altmetric
Research Articles

Direct Detection of Cylmdrocarpon destructans, Root Rot Pathogen of Ginseng by Nested PCR from Soil Samples

, , , &
Pages 33-38 | Received 19 Jan 2010, Accepted 03 Feb 2010, Published online: 22 Jun 2018

References

  • Proctor JTA, Bailey WG. Ginseng: industry, botany and culture. Hort Rev 1987;9:187–236.
  • Ohh SH. Diseases of ginseng: environmental and host effect on disease outbreak and growth of pathogens. Korean J Ginseng Sci 1981;5:73–84.
  • Park H, Ohh SH, Lee CH. Occunence pattern of yield missing plant of Panax ginseng in lines under field condition. J Korean Soc Crop Sci 1980;25:76–81.
  • Hildebrand AA. Root rot of ginseng in Ontario caused by members of the genus Ramularia. Can J Res 1935;12:82–114.
  • Reeleder RD, Roy R, Capell B. Seed and root rots of ginseng (Panax quinquefolius L) caused by Cylindrocarpon destructans and Fusarium spp. J Ginseng Res 2002;26:151–8.
  • Yoo SJ, Cho JW, Jo JS, Yu SH. Effect of physical and chemical factors on the formation and germination of chlamydospore of Cylindrocarpon destructans causing root rot of Panax ginseng. Korean J Plant Pathol 1996;12:422–7.
  • Frederick RD, Snyder CL, Peterson GL, Bonde MR. Polymerase chain reaction assays for the detection and discrimination of the soybean rust pathogens Phakopsora pachyrhizi and P. meibomiae. Phytopathology 2002;92:217–27.
  • Ippolito A, Schena L, Nigro F. Detection of Phytophthora nicotianae and P. citrophthora in citrus roots and soils by nested PCR. Eur J Plant Pathol 2002;108:855–68.
  • Li S, Hartman GL. Molecular detection of Fusarium solani f. sp glycines in soybean roots and soil. Plant Pathol 2003; 52:74–83.
  • Seifert KA, McMullen CR, Yee D, Reeleder RD, Dobinson KF. Molecular differentiation and detection of ginseng-adapted isolates of the root rot fungus Cylindrocarpon destructans. Phytopathology 2003;93:1533–42.
  • Wallenhammar AC, Arwidsson O. Detection of Plasmodiophora brassicae by PCR in naturally infested soils. Eur J Plant Pathol 2001;107:313–21.
  • Tien CC, Chao CC, Chao WL. Methods for DNA extraction from various soils: a comparison. J Appl Microbiol 1999; 86:937–43.
  • Hamelin RC, Berube P, Gignac M, Bourassa M. Identification of root rot fungi in nursery seedlings by nested multiplex PCR. Appl Environ Microbiol 1996;62:4026–31.
  • Young CC, Burghofif RL, Keim LQ Minakbemero V, Lute JR, Hinton SM. Polyvinylpyrrolidone-agarose gel-electrophoresis purification of polymerase chain reaction-amplifiable DNA from soils. Appl Environ Microbiol 1993;59:1972–4.
  • Booth CD. The genus Cylindrocarpon. Mycol Pap (CMI) 1966;104:1–56.
  • Samuels GJ, Brayford D. Variation in Nectria radicicola and its anamorph, Cylindrocarpon destructans. Mycol Res 1990; 94:433–42.
  • Doyle JJ, Doyle JL. Isolation of plant DNA from fresh tissue. Focus 1990;12:13–5.
  • Picard C, Ponsonnet C, Paget E, Nesme X, Simonet P. Detection and enumeration of bacteria in soil by direct DNA extraction and polymerase chain reaction. Appl Environ Microbiol 1992;58:2717–22.
  • Hen-era A, Cockell CS. Exploring microbial diversity in volcanic environments: a review of methods in DNA extraction. J Microbiol Methods 2007;70:1–12.
  • Martin-Laurent F, Philippot L, Hallet S, Chaussod R, Germon JC, Soûlas G et al. DNA extraction from soils: old bias for new microbial diversity analysis methods. Appl Environ Microbiol 2001;67:2354–9.
  • Miller DN, Bryant JE, Madsen EL, Ghiorse WC. Evaluation and optimization of DNA extraction and purification procedures for soil and sediment samples. Appl Environ Microbiol 1999;65:4715–24.
  • Purohit MK, Singh SP. Assessment of various methods for extraction of metagenomic DNA from saline habitats of coastal Gujarat (India) to explore molecular diversity. Lett Appl Microbiol 2009;49:338–44.
  • Sambrook J, Fritsch EF, Maniatis T. Molecular cloning: a laboratory manual. New York: Cold Spring Harbor; 1989.
  • Kong P, Hong CX, Jeffers SN, Richardson PA. A species-specific polymerase chain reaction assay for rapid detection of Phytophthora nicotiame in irrigation water. Phytopathology 2003;93:822–31.
  • Jang CS, Lee JJ, Kim SI, Song JY, Yoo SJ, Kim HG. Specific detection of root rot pathogen, Cylindrocarpon destructans, using nested PCR from ginseng seedlings. Res Plant Dis 2005;11:48–55.

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.