REFERENCES
- Altschul S.F., Gish W., Miller W., Myer E.W., Lipman D. J. (1990) J. Mol. Biol., 215, 403–410.
- Berman H.M., Westbrook J., Feng Z., Gililand G., Bhat T.N., Weissig H., Shindyalov I.N., Bourne P.E. (2000) Nucleic Acids Res., 28, 235–242.
- Castrignano T., De Meo P.D., Cozzetto D., Talamo I.G., Tramontano A. (2006) Nucleic Acids Res., 34, 306–309.
- Coleman R.A., Lee D.P. (2004) Prog. Lipid Res., 43, 134–176.
- Colovos C., Yeates T.O. (1993) Protein. Sci., 2, 1511–1519.
- Courchesne N.M.D., Parisien A., Wang B., Lan C.Q. (2009) J. Biotechnol., 141, 31–41.
- Darden T., York D., Pedersen L. (1993) J. Chem. Phys., 98, 10089–10092.
- Dundas J., Ouyang Z., Tseng J., Binkowski A., Turpaz Y., Liang J. (2006) Nucleic Acids Res., 34, W116–W118.
- Eisenberg D., Luthy R., Bowie J.U. (1997) Method. Enzymol., 277, 396–404.
- Frishman D., Argos P. (1993) Protein, 23, 566–579.
- Goldberg I.K., Cohen Z. (2011) Biochimie, 93, 91–100.
- Guex N., Peitsch M.C. (1997) Electrophoresis, 18, 2714–2723.
- Hall T.A. (1999) Nucleic Acid Symposium Series, 41, 95–98.
- Heath R.J., Rock C.O. (1998) J. Bacteriol., 180, 1425–1430.
- Hess B., Bekker H., Berendsen H.J.C., Fraaije J.G.E.M. (1997) J. Comp. Chem., 18, 1463–1472.
- Hess B., Kutzner C., vander Spoel D., Lindahl E. (2008) J. Chem. Theor. Comp., 4, 435–447.
- Hooft R.W.W., Vriend G., Sander C., Abola E.E. (1996) Nature, 381, 272–292.
- Hu Q., Sommerfeld M., Jarvis E., Ghirardi M., Posewitz M., Seibert M., Darzins A. (2008) Plant. J., 54, 621–639.
- Jain R.K., Coffey M., Lai K., Kumar A., Mackenzie S.L. (2000) Biochem. Soc. Trans, 28, 959–960.
- Jako C., Kumar A., Wei Y., Zou J., Barton D.L., Giblin E. M., Covello P.S., Taylor D.C. (2001) Plant. Physiol., 126, 861–874
- Jaroszewski L., Pawlowski K., Godzik A. (1998) J. Mol. Model., 4, 294–309.
- Jorgensen W.L., Chandrasekhar J., Madura J.D., Impey R.W., Klein M.L. (1983) J. chem. Phys., 79, 926–935.
- Lardizabal K., Ehffertz R., Levering C., Mai J., Pedroso M.C., Jury T., Aasen E., Gruys K., Bennett (2008) Plant. Physiol., 148, 89–96.
- Laskowiski R.A., MacArthur M.V., Moss D.S., Thornton J.M. (1993) J. Appl. Cryst., 26, 283–291.
- Lindahl E., Hess B., vander Spoel D. (2001) J. Mol. Model., 7, 306–317.
- Mukhopadhyay A., Redding A.M., Rutherford B.J., Keasling J.D. (2008) Curr. Opin. Biotech., 19, 228–234.
- Pettersen E.F., Goddard T.D., Huang C.C., Couch G.S., Greenblatt D.M., Meng E.C., Ferrin, T.E. (2004) J. Comput. Chem., 25, 1605–1612.
- Pienkos P.T., Darzins A. (2009) Biofuels. Biprod. Bioref., 3, 431–440.
- Radakovits R., Jinkerson R.E., Darzins A., Posewitz M.C. (2010) Eukaryote Cell, 9, 486–501.
- Rodriguez-Moya M., Gonzalez R. (2010) Biofuels, 1, 291–310.
- Sali A., Blundell T.L. (1993) J. Mol. Biol., 234, 779–815.
- Scott S.A., Davey M.P., Dennis J.S., Horst I., Howe C.J., Lea-Smith D.J., Smith A.J. (2010) Curr. Opin. Biotech., 21, 277–286.
- Slabas A.R., Kroon J.T.M., Scheirer T.P., Gilroy J.S., Hayman M., Rice D.W., Turnbull A.P., Rafferty J.B., Fawcett T. (2002) J. Biol. Chem., 277, 43918–43923.
- Taylor D.C., Katavic V., Zou J., Mackenzie S.L., Keller W.A., Friesen W., Barton D.L., Pedersen K.K., Michael Giblin E. (2001) Mol. Breed., 8, 317–322.
- Thompson J.D., Gibson T.J., Plewniak F., Higgins D.G. (1997) Nucleic Acids Res., 25, 4876–4882.
- Turnbull A.P., Rafferty J.B., Sedelnikova S.E., Kroon J.T.M., Simon J.W., Fawcett T., Nishida I., Murata N., Rice D.W. (2001) Structure, 9, 347–353.
- Wendel A.A., Lewin T.M., Coleman R.A. (2009) Biochim. Biophys. Acta., 1791, 501–506.
- Wijffels R.H., Barbosa M.J. (2010) Science, 329, 796–799.
- Willard L., Ranjan A., Zhang H., Monzavi H., Boyko R.F., Sykes B.D., Wishart D.S. (2003) Nucleic Acids Res., 31, 3316–3319.
- Zheng P., Allen W.B., Roesler K., Williams M.E., Zhang S., Li J., Glassman K., Ranch J., Nubel D., Solawetz W. (2008) Nat. Genet., 40, 367–372.
- Zou J., Katavic V., Giblin E.M., Barton D.L., Mackenzie S.L., Keller W.A., Hu X., Taylor D.C. (1997) Plant Cell, 9, 909–923.