Delimitation of Russula Subgenus Amoenula in Korea Using Three Molecular Markers

References

• Buyck B, Thoen D, Watling R. Ectomycorrhizal fungi of the Guinea-Congo region. Proc R Soc Edinb B Biol Sci 1996; 104:313-33.
   Google Scholar
• Gardes M, Dahlberg A. Mycorrhizal diversity in arctic and alpine tundra: an open question. New Phytol 1996;133:147-57.
   Google Scholar
• Yamashita S, Hijii N. The role of fungal taxa and developmental stage of mushrooms in determining the composition of the mycophagous insect community in a Japanese forest. Eur J Entomol 2007;104:225-33.
   Google Scholar
• Hu L, Zeng L. Investigation on wild edible mushroom resources in Wanxian Country, Sichuan Province. Zhongguo Shiyongjun 1992;11:35-7.
   Google Scholar
• Kirk PM, Cannon PF, Minter DW, Stalpers JA. Dictionary of the fungi. Wallingford: CAB International; 2008.
   Google Scholar
• Sarnari M. Monografia illustrata del genere Russula in Europa. Trento: Associazione Micologica Bresadola; 1998.
   Google Scholar
• Das K, Miller SL, Sharma JR, Sharma P, Bhatt RP. Russula in Himalaya 1: a new species of subgenus Amoenula. Mycotaxon 2005;94:85-8.
   Google Scholar
• Miller SL, Buyck B. Molecular phylogeny of the genus Russula in Europe with a comparison of modern infrageneric classifications. Mycol Res 2002;106:259-76.
   Google Scholar
• Shimono Y, Kato M, Takamatsu S. Molecular phylogeny of Russulaceae (Basidiomycetes; Russulales) inferred from the nucleotide sequences of nuclear large subunit rDNA. Mycoscience 2004;45:303-16.
   Google Scholar
• Schoch CL, Seifert KA, Huhndorf S, Robert V, Spouge JL, Levesque CA, Chen W; Fungal Barcoding Consortium; Fungal Barcoding Consortium Author List. Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for fungi. Proc Natl Acad Sci U S A 2012; 109:6241-6.
   Google Scholar
• Matheny PB. Improving phylogenetic inference of mushrooms with RPB1 and RPB2 nucleotide sequences (Inocybe; Agaricales). Mol Phylogenet Evol 2005;35:1-20.
   Google Scholar
• Lee TS. The full list of recorded mushrooms in Korea. Kor J Mycol 1990;18:233-59.
   Google Scholar
• National Institue of Biological Resources. Molecular phylogeny of Korean major taxa (NIBR No. 11-1480592-000415-01). Incheon: NIBR; 2012.
   Google Scholar
• Kränzlin F. Fungi of Switzerland. Vol. 6. Russulaceae: Lactarius, Russula. Lucerne: Verlag Mykologia; 2005.
   Google Scholar
• Rogers SO, Bendich AJ. Extraction of total cellular DNA from plants, algae and fungi. In: Gelvin SB, Schilperoort RA, editors. Plant molecular biology manual D1. Dordrecht: Springer; 1994. p. 1-8.
   Google Scholar
• White TJ, Bruns T, Lee S, Taylor J. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ, editors. PCR protocols: a guide to methods and applications. New York: Academic Press, Inc.; 1990. p. 315-22.
   Google Scholar
• Vilgalys R, Hester M. Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. J Bacteriol 1990;172:4238-46.
   Google Scholar
• Chun J. Computer assisted classification and identification of actinomycetes. Newcastle upon Tyne: University of Newcastle; 1995.
   Google Scholar
• Katoh K, Kuma K, Toh H, Miyata T. MAFFT version 5: improvement in accuracy of multiple sequence alignment. Nucleic Acids Res 2005;33:511-8.
   Google Scholar
• Darriba D, Taboada GL, Doallo R, Posada D. jModelTest 2: more models, new heuristics and parallel computing. Nat Methods 2012;9:772.
   Google Scholar
• Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A, Höhna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol 2012; 61:539-42.
   Google Scholar
• Rambaut A, Drummond A. Tracer v1.5 Andrew Rambaut; 2007 [cited 2013 Aug 8]. Available from: http://tree.bio.ed.ac.uk/software/tracer/.2009.
   Google Scholar
• Maddison WP, Maddison DR. MacClade: analysis of phylogeny and character evolution. Sunderland: Sinauer Associates; 2000.
   Google Scholar
• Bills GF, Miller OK Jr. Southern Appalachian Russulas. I. Mycologia 1984;76:975-1002.
   Google Scholar
• Romagnesi H. Les russules d’Europe et d’Afrique du Nord. Paris: Bordas; 1985.
   Google Scholar
• Kimura M. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 1980;16:111-20.
   Google Scholar
• Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 2011;28:2731-9.
   Google Scholar
• Jung HS. Fungal flora of Ullung Island (IV): on some agaric fungi. Kor J Mycol 1993;21:64-72.
   Google Scholar
• Kleine CS, McClean T, Miller SL. Genetic divergence among disjunct populations of three Russula spp. from Africa and Madagascar. Mycologia 2013;105:80-9.
   Google Scholar
• Casiraghi M, Labra M, Ferri E, Galimberti A, De Mattia F. DNA barcoding: a six-question tour to improve users’ awareness about the method. Brief Bioinform 2010;11:440-53.
   Google Scholar