Journal of Biomolecular Structure and Dynamics, Volume 21, Issue 5 (2004)

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Journal of Biomolecular Structure and Dynamics, Volume 21, Issue 5 (2004)

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Original Articles

Article
Analysis of the Information Structure of Protein Sequences: A New Method for Analyzing the Domain Organization of Proteins
Alexei N. Nekrasov
Pages: 615-623
Published online: 15 May 2012
AbstractforAnalysis of the Information Structure of Protein Sequences: A New Method for Analyzing the Domain Organization of Proteins | References | PDF (627.1 KB)
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Article
Prediction of Protein Structure by Simulating Coarse-grained Folding Pathways: A Preliminary Report
Andrés Colubri
Pages: 625-638
Published online: 15 May 2012
AbstractforPrediction of Protein Structure by Simulating Coarse-grained Folding Pathways: A Preliminary Report | References | PDF (1.3 MB)
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Article
Molecular Docking of the Scorpion Toxin Tc1 to the Structural Model of the Voltage-gated Potassium Channel Kv1.1 from Human Homo sapiens
Hsuan-Liang Liu & Jin-Chung Lin
Pages: 639-650
Published online: 15 May 2012
AbstractforMolecular Docking of the Scorpion Toxin Tc1 to the Structural Model of the Voltage-gated Potassium Channel Kv1.1 from Human Homo sapiens | References | PDF (1.2 MB)
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Article
Structural Features in the Model of a Thermostable and Stress-resistant Protein, SP1 from aspen
Ravindranath S. Rathore & T. Narasimhamurthy
Pages: 651-655
Published online: 15 May 2012
AbstractforStructural Features in the Model of a Thermostable and Stress-resistant Protein, SP1 from aspen | References | PDF (613.7 KB)
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Article
Thermostability of Protein Studied by Molecular Dynamics Simulation
Jian-Hua Zhang, Li-Li Zhang & Lin-Xiang Zhou
Pages: 657-662
Published online: 15 May 2012
AbstractforThermostability of Protein Studied by Molecular Dynamics Simulation | References | PDF (528.5 KB)
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Article
Reduced Spectral Density Mapping of a Partially Folded Fragment of E. coli Thioredoxin
Gary W. Daughdrill, Pamela D. Vise, Hongjun Zhou, Xiaomin Yang, Wen-Feng Yu, Maria Luisa Tasayco & David F. Lowry
Pages: 663-670
Published online: 15 May 2012
AbstractforReduced Spectral Density Mapping of a Partially Folded Fragment of E. coli Thioredoxin | References | PDF (438.1 KB)
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Article
Aggregation of Mucin by Chromium(III) Complexes as Revealed by Electrokinetic and Rheological Studies: Influence on the Tryptic and O-glycanase Digestion of Mucin
H. Yamini Shrivastava, K. J. Sreeram & Balachandran Unni Nair
Pages: 671-680
Published online: 15 May 2012
AbstractforAggregation of Mucin by Chromium(III) Complexes as Revealed by Electrokinetic and Rheological Studies: Influence on the Tryptic and O-glycanase Digestion of Mucin | References | PDF (543 KB)
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Article
Improved Model of a LexA Repressor Dimer Bound to recA Operator
Rajagopal Chattopadhyaya & Atasi Pal
Pages: 681-689
Published online: 15 May 2012
AbstractforImproved Model of a LexA Repressor Dimer Bound to recA Operator | References | PDF (688.5 KB)
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Article
Methylene Blue Binding to DNA with Alternating AT Base Sequence: Minor Groove Binding is Favored over Intercalation
Remo Rohs & Heinz Sklenar
Pages: 699-711
Published online: 15 May 2012
AbstractforMethylene Blue Binding to DNA with Alternating AT Base Sequence: Minor Groove Binding is Favored over Intercalation | References | PDF (691 KB)
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Article
Daunomycin Intercalation Stabilizes Distinct Backbone Conformations of DNA
Michael Trieb, Christine Rauch, Bernd Wellenzohn, Fajar Wibowo, Thomas Loerting, Erwin Mayer & Klaus R. Liedl
Pages: 713-724
Published online: 15 May 2012
AbstractforDaunomycin Intercalation Stabilizes Distinct Backbone Conformations of DNA | References | PDF (640 KB)
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