Journal of Biomolecular Structure and Dynamics, Volume 28, Issue 3 (2010)

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Journal of Biomolecular Structure and Dynamics, Volume 28, Issue 3 (2010)

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Original Articles

Article
A Conformationally Constrained Peptidomimetic Binds to the Extracellular Region of HER2 Protein
Sashikanth Banappagari, Sharon Ronald & D. Seetharama Satyanarayanajois
Pages: 289-308
Published online: 15 May 2012
AbstractforA Conformationally Constrained Peptidomimetic Binds to the Extracellular Region of HER2 Protein | References | PDF (4 MB)
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Open Access
Article
Key Features for Designing Phosphodiesterase-5 Inhibitors
Tung-Ti Chang, Hung-Jin Huang, Kuei-Jen Lee, Hsin Wei Yu, Hsin-Yi Chen, Fuu-Jen Tsai, Mao-Feng Sun & Calvin Yu-Chian Chen
Pages: 309-321
Published online: 15 May 2012
AbstractforKey Features for Designing Phosphodiesterase-5 Inhibitors | References | PDF (3.1 MB)
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Article
Anti-Infectious Bronchitis Virus (IBV) Activity of 1,8-cineole: Effect on Nucleocapsid (N) Protein
Zhiwei Yang, Nan Wu, Yujie Fu, Gang Yang, Wei Wang, Yuangang Zu & Thomas Efferth
Pages: 323-330
Published online: 15 May 2012
AbstractforAnti-Infectious Bronchitis Virus (IBV) Activity of 1,8-cineole: Effect on Nucleocapsid (N) Protein | References | PDF (1 MB)
  • 149 Views
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Article
Effect of Oligosaccharides and their Monosaccharide Mixtures on the Stability of Proteins: A Scaled Particle Study
Nitesh Kumar Poddar, Z. A. Ansari, R. K. Brojen Singh, Ali A. Moosavi Movahedi & Faizan Ahmad
Pages: 331-341
Published online: 15 May 2012
AbstractforEffect of Oligosaccharides and their Monosaccharide Mixtures on the Stability of Proteins: A Scaled Particle Study | References | PDF (962.2 KB)
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Article
Effects of pH and Temperature on the Structural and Thermodynamic Character of a-syn12 Peptide in Aqueous Solution
Zanxia Cao, Lei Liu & Jihua Wang
Pages: 343-353
Published online: 15 May 2012
AbstractforEffects of pH and Temperature on the Structural and Thermodynamic Character of a-syn12 Peptide in Aqueous Solution | References | PDF (3.2 MB)
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Article
Exposure of Hydrophobic Core in Human Prion Protein Pathogenic Mutant H187R
Linghao Zhong
Pages: 355-361
Published online: 15 May 2012
AbstractforExposure of Hydrophobic Core in Human Prion Protein Pathogenic Mutant H187R | References | PDF (1.6 MB)
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Article
Homology Modeling of Cry10Aa Toxin from B. thuringiensis israelensis and B. thuringiensis subsp. LDC-9
A. Mahalakshmi & R. Shenbagarathai
Pages: 363-378
Published online: 15 May 2012
AbstractforHomology Modeling of Cry10Aa Toxin from B. thuringiensis israelensis and B. thuringiensis subsp. LDC-9 | References | PDF (7 MB)
  • 78 Views
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Article
Homology Modeling and Docking Studies of Human Bcl-2L10 Protein
K. Bhargavi, P. Kalyan Chaitanya, D. Ramasree, M. Vasavi, D. K. Murthy & V. Uma
Pages: 379-391
Published online: 15 May 2012
AbstractforHomology Modeling and Docking Studies of Human Bcl-2L10 Protein | References | PDF (5.5 MB)
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Article
Influence of the Acetylcholinesterase Active Site Protonation on Omega Loop and Active Site Dynamics
Jiří Wiesner, Zdeněk Kříž, Kamil Kuča, Daniel Jun & Jaroslav Koča
Pages: 393-403
Published online: 15 May 2012
AbstractforInfluence of the Acetylcholinesterase Active Site Protonation on Omega Loop and Active Site Dynamics | Full Text | References | PDF (3.1 MB)
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Article
SMpred: A Support Vector Machine Approach to Identify Structural Motifs in Protein Structure Without Using Evolutionary Information
Ganesan Pugalenthi, Krishna Kumar Kandaswamy, P. N. Suganthan, R. Sowdhamini, Thomas Martinetz & Prasanna R. Kolatkar
Pages: 405-414
Published online: 15 May 2012
AbstractforSMpred: A Support Vector Machine Approach to Identify Structural Motifs in Protein Structure Without Using Evolutionary Information | References | PDF (970.1 KB)
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Article
The MBLOSUM: A Server for Deriving Mutation Targets and Position-specific Substitution Rates
Bin-Guang Ma & Igor N. Berezovsky
Pages: 415-419
Published online: 15 May 2012
AbstractforThe MBLOSUM: A Server for Deriving Mutation Targets and Position-specific Substitution Rates | References | PDF (485.6 KB)
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Open Access
Article
Conformational Analysis of Genotoxic Benzo[a]pyrene-7,8-dione-Duplex DNA Adducts Using a Molecular Dynamics Method (II)
Hyun Mee Lee, Biao Jin, Sung Wook Han & Seog K. Kim
Pages: 421-430
Published online: 15 May 2012
AbstractforConformational Analysis of Genotoxic Benzo[a]pyrene-7,8-dione-Duplex DNA Adducts Using a Molecular Dynamics Method (II) | References | PDF (1.8 MB)
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Article
RNA Stability Under Different Combinations of Amber Force Fields and Solvation Models
Zhou Gong, Yunjie Zhao & Yi Xiao
Pages: 431-441
Published online: 15 May 2012
AbstractforRNA Stability Under Different Combinations of Amber Force Fields and Solvation Models | References | PDF (2.2 MB)
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