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Yasunori Nakayama, Naoko Kawasaki, Taiga Tamiya, Sayuri Anzai, Kiyotsuna Toyohara, Akira Nishiyama & Eiichi Kitazono. (2020) Comparison of the prebiotic properties of native chicory and synthetic inulins using swine fecal cultures. Bioscience, Biotechnology, and Biochemistry 84:7, pages 1486-1496.
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Annet Maathuis, Andrew Hoffman, Annette Evans, Lisa Sanders & Koen Venema. (2009) The Effect of the Undigested Fraction of Maize Products on the Activity and Composition of the Microbiota Determined in a Dynamic in Vitro Model of the Human Proximal Large Intestine. Journal of the American College of Nutrition 28:6, pages 657-666.
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Caroline Fässler, ChrisI.R. Gill, Eva Arrigoni, Ian Rowland & Renato Amadò. (2007) Fermentation of Resistant Starches: Influence of In Vitro Models on Colon Carcinogenesis. Nutrition and Cancer 58:1, pages 85-92.
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Articles from other publishers (72)
Jonathan P. Jacobs, Martin L. Lee, David J. Rechtman, Adam K. Sun, Chloe Autran & Victoria Niklas. (2023) Human milk oligosaccharides modulate the intestinal microbiome of healthy adults. Scientific Reports 13:1.
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Maria Wiese, Frank H. J. Schuren, Wiep Klaas Smits, Ed J. Kuijper, Anita Ouwens, Margreet Heerikhuisen, Louise Vigsnaes, Tim J. van den Broek, Paulo de Boer, Roy C. Montijn & Jos M. B. M. van der Vossen. (2022) 2’-Fucosyllactose inhibits proliferation of Clostridioides difficile ATCC 43599 in the CDi-screen, an in vitro model simulating Clostridioides difficile infection. Frontiers in Cellular and Infection Microbiology 12.
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Elisa Martinez, Bernard Taminiau, Cristina Rodriguez & Georges Daube. (2022) Gut Microbiota Composition Associated with Clostridioides difficile Colonization and Infection. Pathogens 11:7, pages 781.
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R.A. RastallM. Diez-MunicioS.D. ForsstenB. HamakerA. MeynierF. Javier MorenoF. RespondekB. StahK. VenemaM. Wiese. (2022) Structure and function of non-digestible carbohydrates in the gut microbiome. Beneficial Microbes 13:2, pages 95-168.
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Mauricio A. García, Felipe Varum, Jozef Al-Gousous, Michael Hofmann, Susanne Page & Peter Langguth. (2022) In Vitro Methodologies for Evaluating Colon-Targeted Pharmaceutical Products and Industry Perspectives for Their Applications. Pharmaceutics 14:2, pages 291.
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Connor O'Farrell, Konstantinos Stamatopoulos, Mark Simmons & Hannah Batchelor. (2021) In vitro models to evaluate ingestible devices: Present status and current trends. Advanced Drug Delivery Reviews 178, pages 113924.
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Yuanyuan Wang, Yibin Xu, Shengliang Xu, Jinyong Yang, Kaiying Wang & Xiuan Zhan. (2021) Bacillus subtilis DSM29784 Alleviates Negative Effects on Growth Performance in Broilers by Improving the Intestinal Health Under Necrotic Enteritis Challenge. Frontiers in Microbiology 12.
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Lorenzo Sardelli, Simone Perottoni, Marta Tunesi, Lucia Boeri, Federica Fusco, Paola Petrini, Diego Albani & Carmen Giordano. (2021) Technological tools and strategies for culturing human gut microbiota in engineered in vitro models. Biotechnology and Bioengineering 118:8, pages 2886-2905.
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Dalila Roupar, Paulo Berni, Joana T. Martins, Ana C. Caetano, José A. Teixeira & Clarisse Nobre. (2021) Bioengineering approaches to simulate human colon microbiome ecosystem. Trends in Food Science & Technology 112, pages 808-822.
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Chris J. Seal, Christophe M. Courtin, Koen Venema & Jan de Vries. (2021) Health benefits of whole grain: effects on dietary carbohydrate quality, the gut microbiome, and consequences of processing. Comprehensive Reviews in Food Science and Food Safety 20:3, pages 2742-2768.
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Thomas Sauvaitre, Lucie Etienne-Mesmin, Adeline Sivignon, Pascale Mosoni, Christophe M Courtin, Tom Van de Wiele & Stéphanie Blanquet-Diot. (2020) Tripartite relationship between gut microbiota, intestinal mucus and dietary fibers: towards preventive strategies against enteric infections. FEMS Microbiology Reviews 45:2.
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Mensiena B. G. Kiewiet, Marlies E. Elderman, Sahar El Aidy, Johannes G. M. Burgerhof, Hester Visser, Elaine E. Vaughan, Marijke M. Faas & Paul de Vos. (2021) Flexibility of Gut Microbiota in Ageing Individuals during Dietary Fiber Long‐Chain Inulin Intake. Molecular Nutrition & Food Research 65:4.
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Glenn Lemmens, Arno Van Camp, Stephanie Kourula, Tim Vanuytsel & Patrick Augustijns. (2021) Drug Disposition in the Lower Gastrointestinal Tract: Targeting and Monitoring. Pharmaceutics 13:2, pages 161.
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K. VenemaJ. VerhoevenS. VerbruggenD. Keller. (2020)
Xylo-oligosaccharides from sugarcane show prebiotic potential in a dynamic computer-controlled
in vitro
model of the adult human large intestine
. Beneficial Microbes 11:2, pages 191-200.
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Lucía Vázquez, Ana Belén Flórez, Sanne Verbruggen, Begoña Redruello, Jessica Verhoeven, Koen Venema & Baltasar Mayo. (2020) Modulation of equol production via different dietary regimens in an artificial model of the human colon. Journal of Functional Foods 66, pages 103819.
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Maria Stolaki, Mans Minekus, Koen Venema, Leo Lahti, Eddy J Smid, Michiel Kleerebezem & Erwin G Zoetendal. (2019) Microbial communities in a dynamic in vitro model for the human ileum resemble the human ileal microbiota. FEMS Microbiology Ecology 95:8.
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Miaomiao Wang, Santad Wichienchot, Xiaowei He, Xiong Fu, Qiang Huang & Bin Zhang. (2019) In vitro colonic fermentation of dietary fibers: Fermentation rate, short-chain fatty acid production and changes in microbiota. Trends in Food Science & Technology 88, pages 1-9.
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V.T. PhamM.H. Mohajeri. (2018)
The application of
in vitro
human intestinal models on the screening and development of pre- and probiotics
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Ezgi Özcan, Rachel Levantovsky & David A. Sela. 2018. Functional Foods and Beverages. Functional Foods and Beverages
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Amoe Baktash, Elisabeth M. Terveer, Romy D. Zwittink, Bastian V. H. Hornung, Jeroen Corver, Ed J. Kuijper & Wiep Klaas Smits. (2018) Mechanistic Insights in the Success of Fecal Microbiota Transplants for the Treatment of Clostridium difficile Infections. Frontiers in Microbiology 9.
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Pieter Van den Abbeele, Bernard Taminiau, Iris Pinheiro, Cindy Duysburgh, Heidi Jacobs, Loek Pijls & Massimo Marzorati. (2018) Arabinoxylo-Oligosaccharides and Inulin Impact Inter-Individual Variation on Microbial Metabolism and Composition, Which Immunomodulates Human Cells. Journal of Agricultural and Food Chemistry 66:5, pages 1121-1130.
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Bryan Tungland. 2018. Human Microbiota in Health and Disease. Human Microbiota in Health and Disease
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Hedda L. Köhling, Sue F. Plummer, Julian R. Marchesi, Kelly S. Davidge & Marian Ludgate. (2017) The microbiota and autoimmunity: Their role in thyroid autoimmune diseases. Clinical Immunology 183, pages 63-74.
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Melanie Bothe, Annet Maathuis, Susann Bellmann, Jos van der Vossen, Dirk Berressem, Annalena Koehler, Susann Schwejda-Guettes, Barbara Gaigg, Angelika Kuchinka-Koch & John Stover. (2017) Dose-Dependent Prebiotic Effect of Lactulose in a Computer-Controlled In Vitro Model of the Human Large Intestine. Nutrients 9:7, pages 767.
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D. KellerR. Van DinterH. CashS. FarmerK. Venema. (2017)
Bacillus coagulans
GBI-30, 6086 increases plant protein digestion in a dynamic, computer-controlled
in vitro
model of the small intestine (TIM-1)
. Beneficial Microbes 8:3, pages 491-496.
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Chaiyavat CHAIYASUT, Thanawat PATTANANANDECHA, Sasithorn SIRILUN, Prasit SUWANNALERT, Sartjin PEERAJAN & Bhagavathi Sundaram SIVAMARUTHI. (2017) Synbiotic preparation with Lactic acid bacteria and inulin as a functional food: In vivo evaluation of microbial activities, and preneoplastic aberrant crypt foci. Food Science and Technology 37:2, pages 328-336.
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Marisol Aguirre, Carlota Bussolo de Souza & Koen Venema. (2016) The Gut Microbiota from Lean and Obese Subjects Contribute Differently to the Fermentation of Arabinogalactan and Inulin. PLOS ONE 11:7, pages e0159236.
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Marjorie E. Koenen, José Manuel Cruz Rubio, Monika Mueller & Koen Venema. (2016) The effect of agave fructan products on the activity and composition of the microbiota determined in a dynamic in vitro model of the human proximal large intestine. Journal of Functional Foods 22, pages 201-210.
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H.R. Cardarelli, R.C.R. Martinez, S. Albrecht, H. Schols, B.D.G.M. Franco, S.M.I. Saad & H. Smidt. (2016)
In vitro
fermentation of prebiotic carbohydrates by intestinal microbiota in the presence of
Lactobacillus amylovorus
DSM 16998
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Marisol Aguirre, Anat Eck, Marjorie E. Koenen, Paul H.M. Savelkoul, Andries E. Budding & Koen Venema. (2016) Diet drives quick changes in the metabolic activity and composition of human gut microbiota in a validated in vitro gut model. Research in Microbiology 167:2, pages 114-125.
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Guus A. M. Kortman, Bas E. Dutilh, Annet J. H. Maathuis, Udo F. Engelke, Jos Boekhorst, Kevin P. Keegan, Fiona G. G. Nielsen, Jason Betley, Jacqueline C. Weir, Zoya Kingsbury, Leo A. J. Kluijtmans, Dorine W. Swinkels, Koen Venema & Harold Tjalsma. (2016) Microbial Metabolism Shifts Towards an Adverse Profile with Supplementary Iron in the TIM-2 In vitro Model of the Human Colon. Frontiers in Microbiology 6.
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Marisol Aguirre, Anat Eck, Marjorie E. Koenen, Paul H.M. Savelkoul, Andries E. Budding & Koen Venema. (2015) Evaluation of an optimal preparation of human standardized fecal inocula for in vitro fermentation studies. Journal of Microbiological Methods 117, pages 78-84.
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Gertjan Schaafsma & Joanne L. Slavin. (2015) Significance of Inulin Fructans in the Human Diet. Comprehensive Reviews in Food Science and Food Safety 14:1, pages 37-47.
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Koen Venema. 2015. Beneficial Microorganisms in Medical and Health Applications. Beneficial Microorganisms in Medical and Health Applications
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Koen Venema. 2015. The Impact of Food Bioactives on Health. The Impact of Food Bioactives on Health
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Marisol Aguirre, Javier Ramiro-Garcia, Marjorie E. Koenen & Koen Venema. (2014) To pool or not to pool? Impact of the use of individual and pooled fecal samples for in vitro fermentation studies. Journal of Microbiological Methods 107, pages 1-7.
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Marisol Aguirre, Daisy M. A. E. Jonkers, Freddy J. Troost, Guus Roeselers & Koen Venema. (2014) In Vitro Characterization of the Impact of Different Substrates on Metabolite Production, Energy Extraction and Composition of Gut Microbiota from Lean and Obese Subjects. PLoS ONE 9:11, pages e113864.
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Anne Marieke Motelica-Wagenaar, Arjen Nauta, Ellen G.H.M. van den Heuvel & Robbert Kleerebezem. (2014) Flux analysis of the human proximal colon using anaerobic digestion model 1. Anaerobe 28, pages 137-148.
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Alfonso Clemente. 2014. Food Oligosaccharides. Food Oligosaccharides
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Koen Venema. 2014. Food Oligosaccharides. Food Oligosaccharides
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Raylene Reimer, Annet Maathuis, Koen Venema, Michael Lyon, Roland Gahler & Simon Wood. (2014) Effect of the Novel Polysaccharide PolyGlycopleX® on Short-Chain Fatty Acid Production in a Computer-Controlled in Vitro Model of the Human Large Intestine. Nutrients 6:3, pages 1115-1127.
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Rafael C.R. Martinez, Haíssa R. Cardarelli, Wendy Borst, Simone Albrecht, Henk Schols, Odette P. Gutiérrez, Annet J.H. Maathuis, Bernadette D.G. de Melo Franco, Elaine C.P. De Martinis, Erwin G. Zoetendal, Koen Venema, Susana M.I. Saad & Hauke Smidt. (2013)
Effect of galactooligosaccharides and
Bifidobacterium animalis
Bb-12 on growth of
Lactobacillus amylovorus
DSM 16698, microbial community structure, and metabolite production in an
in vitro
colonic model set up with human or pig microbiota
. FEMS Microbiology Ecology 84:1, pages 110-123.
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Koen Venema & Pieter van den Abbeele. (2013) Experimental models of the gut microbiome. Best Practice & Research Clinical Gastroenterology 27:1, pages 115-126.
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Ateequr Rehman, Femke-Anouska Heinsen, Marjorie E Koenen, Koen Venema, Henrik Knecht, Stephan Hellmig, Stefan Schreiber & Stephan J Ott. (2012) Effects of probiotics and antibiotics on the intestinal homeostasis in a computer controlled model of the large intestine. BMC Microbiology 12:1.
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Jean-Michel Lecerf, Flore Dépeint, Elise Clerc, Yann Dugenet, Claude N. Niamba, Larbi Rhazi, Amélie Cayzeele, Ghenwa Abdelnour, Arnaud Jaruga, Hassan Younes, Heidi Jacobs, Guy Lambrey, Afif M. Abdelnour & Philippe R. Pouillart. (2012) Xylo-oligosaccharide (XOS) in combination with inulin modulates both the intestinal environment and immune status in healthy subjects, while XOS alone only shows prebiotic properties. British Journal of Nutrition 108:10, pages 1847-1858.
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R. A. Reimer, X. Pelletier, I. G. Carabin, M. R. Lyon, R. J. Gahler & S. Wood. (2012) Faecal short chain fatty acids in healthy subjects participating in a randomised controlled trial examining a soluble highly viscous polysaccharide versus control. Journal of Human Nutrition and Dietetics 25:4, pages 373-377.
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Annet J.H. Maathuis, Ellen G. van den Heuvel, Margriet H.C. Schoterman & Koen Venema. (2012) Galacto-Oligosaccharides Have Prebiotic Activity in a Dynamic In Vitro Colon Model Using a 13C-Labeling Technique. The Journal of Nutrition 142:7, pages 1205-1212.
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Rosa Krajmalnik-Brown, Zehra-Esra Ilhan, Dae-Wook Kang & John K. DiBaise. (2012) Effects of Gut Microbes on Nutrient Absorption and Energy Regulation. Nutrition in Clinical Practice 27:2, pages 201-214.
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A. Drakoularakou, R. Rastall & G. Gibson. 2011. Functional Foods. Functional Foods
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Koen Venema. 2010. Nondigestible Carbohydrates and Digestive Health. Nondigestible Carbohydrates and Digestive Health
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Trevor A. Faber & George C. FaheyJr.Jr.. 2010. Nondigestible Carbohydrates and Digestive Health. Nondigestible Carbohydrates and Digestive Health
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T. Binsl, A. De Graaf, K. Venema, J. Heringa, A. Maathuis, P. De Waard & J.H. Van Beek. (2010)
Measuring non-steady-state metabolic fluxes in starch-converting faecal microbiota
in vitro
. Beneficial Microbes 1:4, pages 391-405.
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D Meyer & M Stasse-Wolthuis. (2009) The bifidogenic effect of inulin and oligofructose and its consequences for gut health. European Journal of Clinical Nutrition 63:11, pages 1277-1289.
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Petia Kovatcheva-Datchary, Erwin G. Zoetendal, Koen Venema, Willem M. de Vos & Hauke Smidt. (2009) Review: Tools for the tract: understanding the functionality of the gastrointestinal tract. Therapeutic Advances in Gastroenterology 2:4_suppl, pages S9-S22.
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Petia Kovatcheva-Datchary, Markus Egert, Annet Maathuis, Mirjana Rajilić-Stojanović, Albert A. de Graaf, Hauke Smidt, Willem M. de Vos & Koen Venema. (2009)
Linking phylogenetic identities of bacteria to starch fermentation in an
in vitro
model of the large intestine by RNA-based stable isotope probing
. Environmental Microbiology 11:4, pages 914-926.
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Hongwei Kong, Mei Wang, Koen Venema, Annet Maathuis, Rob van der Heijden, Jan van der Greef, Guowang Xu & Thomas Hankemeier. (2009) Bioconversion of red ginseng saponins in the gastro-intestinal tract in vitro model studied by high-performance liquid chromatography–high resolution Fourier transform ion cyclotron resonance mass spectrometry. Journal of Chromatography A 1216:11, pages 2195-2203.
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K. Venema, R. Havenaar & M. Minekus. 2009. Designing Functional Foods. Designing Functional Foods
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Maria L. Stewart, Derek A. Timm & Joanne L. Slavin. (2008) Fructooligosaccharides exhibit more rapid fermentation than long-chain inulin in an in vitro fermentation system. Nutrition Research 28:5, pages 329-334.
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D. Meyer & J. de Wolf. 2008. Technology of Functional Cereal Products. Technology of Functional Cereal Products
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R.J.W. Meesters, H.M.H. van Eijk, G.A.M. ten Have, A.A. de Graaf, K. Venema, B.E.J. van Rossum & N.E.P. Deutz. (2007) Application of liquid chromatography–mass spectrometry to measure the concentrations and study the synthesis of short chain fatty acids following stable isotope infusions. Journal of Chromatography B 854:1-2, pages 57-62.
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Markus Egert, Albert A. De Graaf, Annet Maathuis, Pieter De Waard, Caroline M. Plugge, Hauke Smidt, Nicolaas E. P. Deutz, Cor Dijkema, Willem M. De Vos & Koen Venema. (2007) Identification of glucose-fermenting bacteria present in an in vitro model of the human intestine by RNA-stable isotope probing. FEMS Microbiology Ecology 60:1, pages 126-135.
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Simon Hughes & Robert A. Rastall. 2007. Novel Enzyme Technology for Food Applications. Novel Enzyme Technology for Food Applications
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242
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Albert A. de Graaf & Koen Venema. 2007.
73
314
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Caroline Fässler, Eva Arrigoni, Koen Venema, Fred Brouns & Renato Amadò. (2006)
In vitro
fermentability of differently digested resistant starch preparations
. Molecular Nutrition & Food Research 50:12, pages 1220-1228.
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Chandraprakash Khedkar. 2006. Gastrointestinal Microbiology. Gastrointestinal Microbiology
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333
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Eva Bauer, Barbara A Williams, Hauke Smidt, Rainer Mosenthin & Martin W. A Verstegen. (2007) Influence of dietary components on development of the microbiota in single-stomached species. Nutrition Research Reviews 19:1, pages 63-78.
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Markus Egert, Albert A. de Graaf, Hauke Smidt, Willem M. de Vos & Koen Venema. (2006) Beyond diversity: functional microbiomics of the human colon. Trends in Microbiology 14:2, pages 86-91.
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Kun Gao, Anlong Xu, Cyrille Krul, Koen Venema, Yong Liu, Yantao Niu, Jinxiu Lu, Liath Bensoussan, Navindra P Seeram, David Heber & Susanne M Henning. (2006) Of the Major Phenolic Acids Formed during Human Microbial Fermentation of Tea, Citrus, and Soy Flavonoid Supplements, Only 3,4-Dihydroxyphenylacetic Acid Has Antiproliferative Activity ,. The Journal of Nutrition 136:1, pages 52-57.
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Marleen H.M.C. Nuenen, Rianne A.F. Ligt, Robert P. Doornbos, Janneke C.J. Woude, Ernst J. Kuipers & Koen Venema. (2005) The influence of microbial metabolites on human intestinal epithelial cells and macrophages in vitro. FEMS Immunology & Medical Microbiology 45:2, pages 183-189.
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J.W. van der Kamp, R. van den Berg, K. Venema & R. Havenaar. 2005. Using Cereal Science and Technology for the Benefit of Consumers. Using Cereal Science and Technology for the Benefit of Consumers
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124
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