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Gut Microbes Volume 2, 2011 - Issue 6
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Research Paper

Bacterial adaptation to the gut environment favors successful colonization

Microbial and metabonomic characterization of a simplified microbiota mouse model

Enea Rezzonico Nestlé Research Centre; Bioanalytical Science Department; Lausanne, Switzerland
,
Renaud Mestdagh Division of Biomolecular Medicine, Department of Surgery and Cancer, Faculty of Medicine; Imperial College London; London, UK
,
Michèle Delley Nestlé Research Centre; Bioanalytical Science Department; Lausanne, Switzerland
,
Séverine Combremont Nestlé Research Centre; Bioanalytical Science Department; Lausanne, Switzerland
,
Marc-Emmanuel Dumas Division of Biomolecular Medicine, Department of Surgery and Cancer, Faculty of Medicine; Imperial College London; London, UK
,
Elaine Holmes Division of Biomolecular Medicine, Department of Surgery and Cancer, Faculty of Medicine; Imperial College London; London, UK
,
Jeremy Nicholson Division of Biomolecular Medicine, Department of Surgery and Cancer, Faculty of Medicine; Imperial College London; London, UK
&
Rodrigo Bibiloni Nestlé Research Centre; Bioanalytical Science Department; Lausanne, SwitzerlandCorrespondence[email protected]
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Pages 307-318 | Published online: 01 Nov 2011

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Yixuan Qiu, Jiaming Yu, Yi Li, Fan Yang, Huiyuan Yu, Mengjuan Xue, Fan Zhang, Xin Jiang, Xueying Ji & Zhijun Bao. (2021) Depletion of gut microbiota induces skeletal muscle atrophy by FXR-FGF15/19 signalling. Annals of Medicine 53:1, pages 508-522.
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Sylvie Miquel, Rebeca Martín, Chantal Bridonneau, Véronique Robert, Harry Sokol, Luis G Bermúdez-Humarán, Muriel Thomas & Philippe Langella. (2014) Ecology and metabolism of the beneficial intestinal commensal bacterium Faecalibacterium prausnitzii. Gut Microbes 5:2, pages 146-151.
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Rodrigo Bibiloni. (2012) Rodent models to study the relationships between mammals and their bacterial inhabitants. Gut Microbes 3:6, pages 536-543.
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Articles from other publishers (11)

Pim T van Leeuwen, Stanley Brul, Jianbo Zhang & Meike T Wortel. (2023) Synthetic microbial communities (SynComs) of the human gut: design, assembly, and applications. FEMS Microbiology Reviews 47:2.
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Arianna I. Celis, Andrés Aranda-Díaz, Rebecca Culver, Katherine Xue, David Relman, Handuo Shi & Kerwyn Casey Huang. (2022) Optimization of the 16S rRNA sequencing analysis pipeline for studying in vitro communities of gut commensals. iScience 25:4, pages 103907.
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Andrés Aranda-Díaz, Katharine Michelle Ng, Tani Thomsen, Imperio Real-Ramírez, Dylan Dahan, Susannah Dittmar, Carlos Gutierrez Gonzalez, Taylor Chavez, Kimberly S. Vasquez, Taylor H. Nguyen, Feiqiao Brian Yu, Steven K. Higginbottom, Norma F. Neff, Joshua E. Elias, Justin L. Sonnenburg & Kerwyn Casey Huang. (2022) Establishment and characterization of stable, diverse, fecal-derived in vitro microbial communities that model the intestinal microbiota. Cell Host & Microbe 30:2, pages 260-272.e5.
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Silvia Bolsega, André Bleich & Marijana Basic. (2021) Synthetic Microbiomes on the Rise—Application in Deciphering the Role of Microbes in Host Health and Disease. Nutrients 13:11, pages 4173.
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Maggie R. Williams, Robert D. Stedtfeld, Tiffany M. Stedtfeld, Robert B. Crawford, Tomomi Kuwahara, Norbert E. Kaminski, James M. Tiedje & Syed A. Hashsham. (2021) MicroRNA-based host response to toxicant exposure is influenced by the presence of gut microbial populations. Science of The Total Environment 797, pages 149130.
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Randi Lundberg. (2018) Humanizing the gut microbiota of mice: Opportunities and challenges. Laboratory Animals 53:3, pages 244-251.
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Janneke Elzinga, John van der Oost, Willem M. de Vos & Hauke Smidt. (2019) The Use of Defined Microbial Communities To Model Host-Microbe Interactions in the Human Gut. Microbiology and Molecular Biology Reviews 83:2.
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Ludovica F. Buttó & Dirk Haller. (2016) Dysbiosis in intestinal inflammation: Cause or consequence. International Journal of Medical Microbiology 306:5, pages 302-309.
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J.P. Lallès, C. Michel, V. Theodorou & J.P. Segain. 2016. The Epigenome and Developmental Origins of Health and Disease. The Epigenome and Developmental Origins of Health and Disease 337 360 .
C. S. Eun, Y. Mishima, S. Wohlgemuth, B. Liu, M. Bower, I. M. Carroll & R. B. Sartor. (2014) Induction of Bacterial Antigen-Specific Colitis by a Simplified Human Microbiota Consortium in Gnotobiotic Interleukin-10-/- Mice. Infection and Immunity 82:6, pages 2239-2246.
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Jonas Schluter & Kevin R. Foster. (2012) The Evolution of Mutualism in Gut Microbiota Via Host Epithelial Selection. PLoS Biology 10:11, pages e1001424.
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