Corynebacterium glutamicum as an indicator for environmental cobalt and silver stress–A proteome analysis

References

• Kobayashi , M. and Shimizu , S. 1999 . Cobalt proteins . Eur. J. Biochem. , 261 ( 1 ) : 1 – 9 .
   PubMedGoogle Scholar
• Llesuy , S. F. and Tomaro , M. L. 1994 . Heme oxygenase and oxidative stress. Evidence of involvement of bilirubin as physiological protector against oxidative damage . Biochim. Biophys. Acta , 1223 ( 1 ) : 9 – 14 .
   PubMed Web of Science ®Google Scholar
• Jennette , K. W. 1981 . The role of metals in carcinogenesis - biochemistry and metabolism . Environ. Health Perspect. , 40 ( 8 ) : 233 – 252 .
   PubMed Web of Science ®Google Scholar
• Barceloux , D. G. 1999 . Cobalt . J. Toxicol. Clin. Toxicol. , 37 ( 2 ) : 201 – 216 .
   PubMed Web of Science ®Google Scholar
• Schreurs , W. J. A. and Rosenberg , H. 1982 . Effect of silver ions on transport and retention of phosphate by Escherichia coli . J. Bacteriol. , 152 ( 1 ) : 7 – 13 .
   PubMed Web of Science ®Google Scholar
• Dibrov , P. , Dzioba , J. , Gosink , K. K. and Hase , C. C. 2002 . Chemiosmotic mechanism of antimicrobial activity of Ag+ in Vibrio cholerae. . Antimicrob. Agents Chemother. , 46 ( 8 ) : 2668 – 2670 .
   PubMed Web of Science ®Google Scholar
• Park , H. J. , Kim , J. Y. , Kim , J. , Lee , J. H. , Hahn , J. S. , Gu , M. B. and Yoon , J. 2009 . Silver-ion-mediated reactive oxygen species generation affecting bactericidal activity . Water Res. , 43 ( 4 ) : 1027 – 1032 .
   PubMed Web of Science ®Google Scholar
• U. S. EPA . 1988 . Drinking Water Criteria Document for Silver , Washington, DC : Office of Health and Environmental Assessment . Cincinnati, OH for the Office of Drinking Water: ECAO-CIN-026
   Google Scholar
• Matuk , Y. , Ghosh , M. and Mcculloch , C. 1981 . Distribution of silver in the eyes and plasma-proteins of the albino-rat . Can. J. Opthalmol.-J. Can. Opthalmol. , 16 ( 3 ) : 145 – 150 .
   PubMed Web of Science ®Google Scholar
• Olcott , C. T. 1948 . Experimental Argyrosis. 4. Morphologic changes in the experimental animal . Am. J. Pathol. , 24 ( 4 ) : 813 – 833 .
   PubMed Web of Science ®Google Scholar
• Stadler , J. A. and Schweyen , R. J. 2002 . The yeast iron regulon is induced upon cobalt stress and crucial for cobalt tolerance . J. Biol. Chem. , 277 ( 42 ) : 39649 – 39654 .
   PubMed Web of Science ®Google Scholar
• Ranquet , C. , Ollagnier-de-Choudens , S. , Loiseau , L. , Barras , F. and Fontecave , M. 2007 . Cobalt stress in Escherichia coli - The effect on the iron-sulfur proteins . J. Biol. Chem. , 282 ( 42 ) : 30442 – 30451 .
   PubMed Web of Science ®Google Scholar
• Lok , C. N. , Ho , C. M. , Chen , R. , He , Q. Y. , Yu , W. Y. , Sun , H. Z. , Tam , P. K. H. , Chiu , J. F. and Che , C. M. 2006 . Proteomic analysis of the mode of antibacterial action of silver nanoparticles . J. Proteome Res. , 5 ( 4 ) : 916 – 924 .
   PubMed Web of Science ®Google Scholar
• Kalinowski , J. , Bathe , B. , Bartels , D. , Bischoff , N. , Bott , M. , Burkovski , A. , Dusch , N. , Eggeling , L. , Eikmanns , B. J. , Gaigalat , L. , Goesmann , A. , Hartmann , M. , Huthmacher , K. , Kramer , R. , Linke , B. , McHardy , A. C. , Meyer , F. , Mockel , B. , Pfefferle , W. , Puhler , A. , Rey , D. A. , Ruckert , C. , Rupp , O. , Sahm , H. , Wendisch , V. F. , Wiegrabe , I. and Tauch , A. 2003 . The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins . J. Biotechnol. , 104 ( 1–3 ) : 5 – 25 .
   PubMed Web of Science ®Google Scholar
• Görg , A. , Obermaier , C. , Boguth , G. , Harder , A. , Scheibe , B. , Wildgruber , R. and Weiss , W. 2000 . The current state of two-dimensional electrophoresis with immobilized pH gradients . Electrophoresis , 21 ( 6 ) : 1037 – 1053 .
   PubMed Web of Science ®Google Scholar
• Gorg , A. , Postel , W. and Gunther , S. 1988 . The current state of two-dimensional electrophoresis with immobilized pH gradients . Electrophoresis , 9 ( 9 ) : 531 – 546 .
   PubMed Web of Science ®Google Scholar
• Gorg , A. , Postel , W. , Weser , J. , Gunther , S. , Strahler , J. R. , Hanash , S. M. and Somerlot , L. 1987 . Elimination of point streaking on silver stained two-dimensional gels by addition of iodoacetamide to the equilibration buffer . Electrophoresis , 8 ( 2 ) : 122 – 124 .
   Web of Science ®Google Scholar
• Blum , H. , Beier , H. and Gross , H. J. 1987 . Improved silver staining of plant-proteins, RNA and DNA in polyacrylamide gels . Electrophoresis , 8 ( 2 ) : 93 – 99 .
   Web of Science ®Google Scholar
• Candiano , G. , Bruschi , M. , Musante , L. , Santucci , L. , Ghiggeri , G. M. , Carnemolla , B. , Orecchia , P. , Zardi , L. and Righetti , P. G. 2004 . Blue silver: A very sensitive colloidal coomassie G-250 staining for proteome analysis . Electrophoresis , 25 ( 9 ) : 1327 – 1333 .
   PubMed Web of Science ®Google Scholar
• Wildgruber , R. , Reil , G. , Drews , O. , Parlar , H. and Gorg , A. 2002 . Web-based two-dimensional database of Saccharomyces cerevisiae proteins using immobilized pH gradients from pH 6 to pH 12 and matrix-assisted laser desorption/ionization-time of flight mass spectrometry . Proteomics , 2 ( 6 ) : 727 – 732 .
   PubMed Web of Science ®Google Scholar
• Fanous , A. , Weiss , W. , Gorg , A. , Jacob , F. and Parlar , H. 2008 . A proteome analysis of the cadmium and mercury response in Corynebacterium glutamicum . Proteomics , 8 ( 23–24 ) : 4976 – 4986 .
   PubMed Web of Science ®Google Scholar
• Das , A. , Silaghi-Dumitrescu , R. , Ljungdahl , L. G. and Kurtz , D. M. 2005 . Cytochrome bd oxidase, oxidative stress, and dioxygen tolerance of the strictly anaerobic bacterium Moorella thermoacetica . J. Bacteriol. , 187 ( 6 ) : 2020 – 2029 .
   PubMed Web of Science ®Google Scholar
• Carmel-Harel , O. and Storz , G. 2000 . Roles of the glutathione- and thioredoxin-dependent reduction systems in the Escherichia coli and Saccharomyces cerevisiae responses to oxidative stress . Annu. Rev. Microbiol. , 54 : 439 – 461 .
   PubMed Web of Science ®Google Scholar
• Lithgow , J. K. , Hayhurst , E. J. , Cohen , G. , Aharonowitz , Y. and Foster , S. J. 2004 . Role of a cysteine synthase in Staphylococcus aureus . J. Bacteriol. , 186 ( 6 ) : 1579 – 1590 .
   PubMed Web of Science ®Google Scholar
• Lo , R. , Turner , M. S. , Barry , D. G. , Sreekumar , R. , Walsh , T. P. and Giffard , P. M. 2009 . Cystathionine gamma-lyase is a component of cystine-mediated oxidative defense in Lactobacillus reuteri BR11 . J. Bacteriol. , 191 ( 6 ) : 1827 – 1837 .
   PubMed Web of Science ®Google Scholar
• Li , S. Y. , Li , Q. , Shen , J. J. , Dong , F. , Sigmon , V. K. , Li , Y. Z. and Ren , J. 2006 . Attenuation of acetaldehyde-induced cell injury by overexpression of aldehyde dehydrogenase-2 (ALDH2) transgene in human cardiac myocytes: role of MAP kinase signaling . J. Mol. Cell. Cardiol. , 40 ( 2 ) : 283 – 294 .
   PubMed Web of Science ®Google Scholar
• Hunt , C. R. , Sim , J. E. , Sullivan , S. J. , Featherstone , T. , Golden , W. , Von Kapp-Herr , C. , Hock , R. A. , Gomez , R. A. , Parsian , A. J. and Spitz , D. R. 1998 . Genomic instability and catalase gene amplification induced by chronic exposure to oxidative stress . Cancer Res. , 58 ( 17 ) : 3986 – 3992 .
   PubMed Web of Science ®Google Scholar
• Vido , K. , Spector , D. , Lagniel , G. , Lopez , S. , Toledano , M. B. and Labarre , J. 2001 . A proteome analysis of the cadmium response in Saccharomyces cerevisiae . J. Biol. Chem. , 276 ( 11 ) : 8469 – 8474 .
   PubMed Web of Science ®Google Scholar
• Godon , C. , Lagniel , G. , Lee , J. , Buhler , J. M. , Kieffer , S. , Perrot , R. , Boucherie , H. , Toledano , M. B. and Labarre , J. 1998 . The H2O2 stimulon in Saccharomyces cerevisiae . J. Biol. Chem. , 273 ( 35 ) : 22480 – 22489 .
   PubMed Web of Science ®Google Scholar
• Venkatesan , B. , Mahimainathan , L. , Das , F. , Ghosh-Choudhury , N. and Choudhury , G. G. 2007 . Downregulation of catalase by reactive oxygen species via PI 3 kinase/Akt signalling in mesangial cells . J. Cell. Physiol. , 211 ( 2 ) : 457 – 467 .
   PubMed Web of Science ®Google Scholar
• Isoir , M. , Buard , V. , Gasser , P. , Voisin , P. , Lati , E. and Benderitter , M. 2006 . Human keratinocyte radiosensitivity is linked to redox modulation . J. Dermatol. Sci. , 41 ( 1 ) : 55 – 65 .
   PubMed Web of Science ®Google Scholar
• Elledge , S. J. , Zheng , Z. and Allen , J. B. 1992 . Ribonucleotide reductase - regulation, regulation, regulation . Trends Biochem. Sci. , 17 ( 3 ) : 119 – 123 .
   PubMed Web of Science ®Google Scholar
• Herrick , J. and Sclavi , B. 2007 . Ribonucleotide reductase and the regulation of DNA replication: an old story and an ancient heritage . Mol. Microbiol. , 63 ( 1 ) : 22 – 34 .
   PubMed Web of Science ®Google Scholar
• Gon , S. and Beckwith , J. 2006 . Ribonucleotide reductases: Influence of environment on synthesis and activity . Antioxid. Redox Signal. , 8 ( 5–6 ) : 773 – 780 .
   PubMed Web of Science ®Google Scholar
• Xue , L. J. , Zhou , B. S. , Liu , X. Y. , Wang , T. L. , Shih , J. , Qi , C. , Heung , Y. and Yen , Y. 2006 . Structurally dependent redox property of ribonucleotide reductase subunit p53R2 . Cancer Res. , 66 ( 4 ) : 1900 – 1905 .
   PubMed Web of Science ®Google Scholar
• Kulaeva , O. I. , Koonin , E. V. , McDonald , J. P. , Randall , S. K. , Rabinovich , N. , Connaughton , J. F. , Levine , A. S. and Woodgate , R. 1996 . Identification of a DinB//UmuC homolog in the archeon Sulfolobus solfataricus . Mutat. Res.-Fundam. Mol. Mech. Mutagen. , 357 ( 1–2 ) : 245 – 253 .
   PubMed Web of Science ®Google Scholar
• Fanous , A. , Weiland , F. , Luck , C. , Gorg , A. , Friess , A. and Parlar , H. 2007 . A proteome analysis of Corynebacterium glutamicum after exposure to the herbicide 2,4-dichlorophenoxy acetic acid (2,4-D) . Chemosphere , 69 ( 1 ) : 25 – 31 .
   PubMed Web of Science ®Google Scholar
• Benndorf , D. , Thiersch , M. , Loffhagen , N. , Kunath , C. and Harms , H. 2006 . Pseudomonas putida KT2440 responds specifically to chlorophenoxy herbicides and their initial metabolites . Proteomics , 6 ( 11 ) : 3319 – 3329 .
   PubMed Web of Science ®Google Scholar
• Goldberg , M. A. , Dunning , S. P. and Bunn , H. F. 1988 . Regulation of the erythropoietin gene - evidence that the oxygen sensor is a heme protein . Science , 242 ( 4884 ) : 1412 – 1415 .
   PubMed Web of Science ®Google Scholar
• Bunn , H. F. , Gu , J. , Huang , L. E. , Park , J. W. and Zhu , H. 1998 . Erythropoietin: A model system for studying oxygen-dependent gene regulation . J. Exp. Biol. , 201 ( 8 ) : 1197 – 1201 .
   PubMed Web of Science ®Google Scholar
• Almeida , C. C. , Romao , C. V. , Lindley , P. F. , Teixeira , M. and Saraiva , L. M. 2006 . The role of the hybrid cluster protein in oxidative stress defense . J. Biol. Chem. , 281 ( 43 ) : 32445 – 32450 .
   PubMed Web of Science ®Google Scholar
• Barbier , G. , Oesterhelt , C. , Larson , M. D. , Halgren , R. G. , Wilkerson , C. , Garavito , R. M. , Benning , C. and Weber , A. P. M. 2005 . Comparative genomics of two closely related unicellular thermo-acidophilic red algae, Galdieria sulphuraria and Cyanidioschyzon merolae, reveals the molecular basis of the metabolic flexibility of Galdieria sulphuraria and significant differences in carbohydrate metabolism of both algae . Plant Physiol. , 137 ( 2 ) : 460 – 474 .
   PubMed Web of Science ®Google Scholar
• Tzvetkov , M. , Klopprogge , C. , Zelder , O. and Liebl , W. 2003 . Genetic dissection of trehalose biosynthesis in Corynebacterium glutamicum: inactivation of trehalose production leads to impaired growth and an altered cell wall lipid composition . Microbiol-Sgm. , 149 : 1659 – 1673 .
   PubMed Web of Science ®Google Scholar
• Santos , P. M. , Benndorf , D. and Sa-Correia , I. 2004 . Insights into Pseudomonas putida KT2440 response to phenol-induced stress by quantitative proteomics . Proteomics , 4 ( 9 ) : 2640 – 2652 .
   PubMed Web of Science ®Google Scholar
• Lamote , J. and Willems , G. 1998 . DNA synthesis, cell proliferation index in normal and abnormal gallbladder epithelium . Microsc. Res. Tech. , 38 ( 6 ) : 609 – 615 .
   Web of Science ®Google Scholar