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Chronobiology International
The Journal of Biological and Medical Rhythm Research
Volume 24, 2007 - Issue 5
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Original

Chronobiological Analysis of Circadian Patterns in Transcription of Seven Key Clock Genes in Six Peripheral Tissues in Mice

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Pages 793-820 | Received 19 Feb 2007, Accepted 19 Jul 2007, Published online: 07 Jul 2009

References

  • Alvarez J D, Sehgal A. The thymus is similar to the testis in its pattern of circadian clock gene expression. J. Biol. Rhythms 2005; 20: 111–121
  • Alvarez J D, Chen D, Storer E, Sehgal A. Non‐cyclic and developmental stage‐specific expression of circadian clock proteins during murine spermatogenesis. Biol. Reprod. 2003; 69: 81–91
  • Balsalobre A, Marcacci L, Schibler U. Multiple signaling pathways elicit circadian gene expression in cultured Rat‐1 fibroblasts. Curr. Biol. 2000; 10: 1291–1294
  • Bittman E L, Doherty L, Huang L, Paroskie A. Period gene expression in mouse endocrine tissues. Am. J. Physiol. Regul. Integr. Comp. Physiol. 2003; 285: R561–R569
  • Bjarnason G A, Jordan R C, Wood P A, Li Q, Lincoln D W, Sothern R B, Hrushesky W J, Ben‐David Y. Circadian expression of clock genes in human oral mucosa and skin: Association with specific cell‐cycle phases. Am. J. Pathol. 2001; 158: 1793–1801
  • Canaple L, Rambaud J, Dkhissi‐Benyahya O, Rayet B, Tan N S, Michalik L, Delaunay F, Wahli W, Laudet V. Reciprocal regulation of brain and muscle Arnt‐like protein 1 and peroxisome proliferator‐activated receptor alpha defines a novel positive feedback loop in the rodent liver circadian clock. Mol. Endocrinol. 2006; 20: 1715–1727
  • Chen Y G, Mantalaris A, Bourne P, Keng P, Wu J H. Expression of mPer1 and mPer2, two mammalian clock genes, in murine bone marrow. Biochem. Biophys. Res. Commun. 2000; 276: 724–728
  • Damiola F, Le Minh N, Preitner N, Kornmann B, Fleury‐Olela F, Schibler U. Restricted feeding uncouples circadian oscillators in peripheral tissues from the central pacemaker in the suprachiasmatic nucleus. Genes. Dev. 2000; 14: 2950–2961
  • Dardente H, Cermakian N. Molecular circadian rhythms in central and peripheral clocks in mammals. Chronobiol. Int. 2007; 24: 195–213
  • Fukuhara C, Tosini G. Peripheral circadian oscillators and their rhythmic regulation. Front. Biosci. 2003; 8: 642–651
  • Furukawa M, Kawamoto T, Noshiro M, Honda K K, Sakai M, Fujimoto K, Honma S, Honma K, Hamada T, Kato Y. Clock gene expression in the submandibular glands. J. Dent. Res. 2005; 84: 1193–1197
  • Gachon F, Nagoshi E, Brown S A, Ripperger J, Schibler U. The mammalian circadian timing system: from gene expression to physiology. Chromosoma. 2004; 113: 103–112
  • Gery S, Komatsu N, Baldyvan L, Yu A, Koo D, Koeffler H P. The circadian gene per1 plays an important role in cell growth and DNA damage control in human cancer cells. Mol. Cell 2006; 22: 375–382
  • Guillaumond F, Dardente H, Giguere V, Cermakian N. Differential control of Bmal1 circadian transcription by REV‐ERB and ROR nuclear receptors. J. Biol. Rhythms 2005; 20: 391–403
  • Guo H, Brewer J M, Champhekar A, Harris R BS, Bittman E L. Differential control of peripheral circadian rhythms by suprachiasmatic‐dependent neural signals. Proc. Natl. Acad. Sci. USA 2005; 102: 3111–3116
  • Kalsbeek A, Perreau-Lenz S, Buijs R M. A network of (autonomic) clock outputs. Chronobiol. Int. 2006; 23: 201–215
  • Katinas G S, Halberg F, Cornélissen G, Otsuka K, Bakken E E. Time microscopy for all kinds of data including circadian clock biology. Biomed. Pharmacother. 2005; 59(Suppl.1)S20–S23
  • Kliewer S A, Forman B M, Blumberg B, Ong E S, Borgmeyer U, Mangeldorf D J, Umesono K, Evans R M. Differential expression and activation of a family of murine peroxisome proliferator‐activated receptors. Proc. Natl. Acad. Sci. USA 1994; 91: 7355–7359
  • Ko C H, Takahashi J S. Molecular components of the mammalian circadian clock. Hum. Mol. Genet. 2006; 15: R271–R277
  • Kobayashi K, Kanno S, Smit B, Van der Horst G T, Takao M, Yasui A. Characterization of photolyase/blue‐light receptor homologs in mouse and human cells. Nucleic Acids Res. 1998; 26: 5086–5092
  • Koukkari W L, Sothern R B. Chronobiometry: analyzing for rhythms. Introducing Biological Rhythms. Springer, New York 2006; 577–602
  • Lambert C M, Weaver D R. Peripheral gene expression rhythms in a diurnal rodent. J. Biol. Rhythms 2006; 21: 77–79
  • Lee C C. Tumor suppression by the mammalian Period genes. Cancer Causes Control. 2006; 17: 525–530
  • Lowrey P L, Takahashi J S. Mammalian circadian biology: elucidating genome‐wide levels of temporal organization. Annu. Rev. Genomics Hum. Genet. 2004; 5: 407–441
  • Matsuo T, Yamaguchi S, Mitsui S, Emi A, Shimoda F, Okamura H. Control mechanism of the circadian clock for timing of cell division in vivo. Science 2003; 302: 255–259
  • Mojón A, Fernández J R, Hermida R. Chronolab: An interactive software package for chronobiologic time series analysis written for the Macintosh computer. Chronobiol. Int. 1992; 9: 403–412
  • Morse D, Cermakian N, Brancorsini S, Parvinen M, Sassone‐Corsi P. No circadian rhythms in testis: Period1 expression is clock independent and developmentally regulated in the mouse. Mol. Endocrinol. 2003; 17: 141–151
  • Mrosovsky N. Beyond the suprachiasmatic nucleus. Chronobiol. Int. 2003; 20: 1–8
  • Nagoshi E, Saini C, Bauer C, Laroche T, Naef F, Schibler U. Circadian gene expression in individual fibroblasts: Cell‐autonomous and self‐sustained oscillators pass time to daughter cell. Cell 2004; 119: 693–705
  • Nelson W, Tong Y L, Lee J K, Halberg F. Methods for cosinor rhythmometry. Chronobiologia 1979; 6: 305–323
  • Nicholas R, Glossop J, Hardin P E. Central and peripheral circadian oscillator mechanisms in flies and mammals. J. Cell Sci. 2002; 115: 3369–3377
  • Noshiro M, Furukawa M, Honma S, Kawamoto T, Hamada T, Honma K, Kato Y. Tissue‐specific disruption of rhythmic expression of Dec1 and Dec2 in clock mutant mice. J. Biol. Rhythms 2005; 20: 404–418
  • Oishi K, Fukui H, Ishida N. Rhythmic expression of BMAL1 mRNA is altered in Clock mutant mice: differential regulation in the suprachiasmatic nucleus and peripheral tissues. Biochem. Biophys. Res. Commun. 2000; 268: 164–171
  • Peirson S N, Butler J N, Duffield G E, Takher S, Sharma P, Foster R G. Comparison of clock gene expression in SCN, retina, heart, and liver of mice. Biochem. Biophys. Res. Commun. 2006; 351: 800–807
  • Reppert S M, Weaver D R. Molecular analysis of mammalian circadian rhythms. Annu. Rev. Physiol. 2001; 63: 647–676
  • Sladek M, Jindrakova Z, Dendova Z, Sumova A. Postnatal ontogenesis of the circadian clock within the rat liver. Am. J. Physiol. Integr. Comp. Physiol. 2007; 292: R1224–R1229
  • Smale L, Lee T, Nunez A A. Mammalian diurnality: some facts and gaps. J. Biol. Rhythms 2003; 18: 356–366
  • Sothern R B. Time of day versus internal circadian timing references. J. Infus. Chemother. 1995; 5: 24–30
  • Stokkan K A, Yamazaki S, Tei H, Sakaki Y, Menaker M. Entrainment of the circadian clock in the liver by feeding. Science 2001; 291: 490–493
  • Storch K F, Lipan O, Leykin I, Viswanathan N, Davis F C, Wong W H, Weltz C J. Extensive and divergent circadian gene expression in liver and heart. Nature 2002; 417: 78–83
  • Stratmann M, Schibler U. Properties, entrainment, and physiological functions of mammalian peripheral oscillators. J. Biol. Rhythms 2006; 21: 494–506
  • Touitou Y, Smolensky M H, Portaluppi F. Ethics, standards, and procedures of animal and human chronobiology research. Chronobiol. Int. 2006; 23: 1083–1096
  • Tsinkalovsky O, Filipski E, Rosenlund B, Sothern R B, Eiken H G, Wu M W, Claustrat B, Bayer J, Lévi F, Laerum O D. Circadian expression of clock genes in purified hematopoietic stem cells is developmentally regulated in mouse bone marrow. Exp. Hematol. 2006; 34: 1248–1260
  • Wang G Q, Fu C L, Li J X, Du Y Z, Tong J. Circadian rhythms and different photoresponses of Clock gene transcription in the rat suprachiasmatic nucleus and pineal gland. Acta Physiol. Sin. 2006; 58: 359–364
  • Yamamoto T, Nakahata Y, Soma H, Akashi M, Mamine T, Takumi T. Transcriptional oscillation of canonical clock genes in mouse peripheral tissues. BMC Mol. Biol. 2004; 5: 18
  • Yamazaki S, Numano R, Abe M, Hida A, Takahashi R, Ueda M, Block G D, Sakaki Y, Menaker M, Tei H. Resetting central and peripheral circadian oscillators in transgenic rats. Science 2000; 288: 682–685
  • You S, Wood P A, Xiong Y, Kobayashi M, Du‐Quiton J, Hrushesky W J. Daily coordination of cancer growth and circadian clock gene expression. Breast Cancer Res. Treat. 2005; 91: 47–60
  • Young M E. The circadian clock within the heart: potential influence on myocardial gene expression, metabolism, and function. Am. J. Physiol. Heart. Circ. Physiol. 2006; 290: H1–H16
  • Zylka M J, Shearman L P, Weaver D R, Reppert S M. Three period homologs in mammals: differential light responses in the suprachiasmatic circadian clock and oscillating transcripts outside of brain. Neuron 1998; 20: 1103–1110

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