Brilliant green decolorization by dye decolorizing peroxidase producing bacterium, Achromobacter insolitus isolated from Forest soils of Similipal Biosphere Reserve, Odisha

References

• Abd El-Rahim, W. M., A. Z. A. Azeiz, H. Moawad, and M. J. Sadowsky. 2019. Identification and characterization of two peroxidases from Lichtheimia corymbifera. Biocatalysis and Agricultural Biotechnology 18:100995. doi:10.1016/j.bcab.2019.01.033.
   Web of Science ®Google Scholar
• Abd El-Rahim, W. M., H. Moawad, A. Z. A. Azeiz, and M. J. Sadowsky. 2021. Biodegradation of azo dyes by bacterial or fungal consortium and identification of the biodegradation products. Egyptian Journal of Aquatic Research 47 (3):269–76. doi:10.1016/j.ejar.2021.06.002.
   Web of Science ®Google Scholar
• Abdul Rahman, N. H., N. A. Abdul Rahman, S. Abd Aziz, and M. A. Hassan. 2013. Production of ligninolytic enzymes by newly isolated bacteria from palm oil plantation soils. BioResources 8 (4):6136–50. doi:10.15376/biores.8.4.6136-6150.
   Web of Science ®Google Scholar
• Alalewi, A., and C. Jiang. 2012. Bacterial influence on textile wastewater decolorization. Journal of Environmental Protection 03 (08):889–903. doi:10.4236/jep.2012.328104.
   Google Scholar
• Arabaci, G., and A. Usluoglu. 2014. The enzymatic decolorization of textile dyes by the immobilized polyphenol oxidase from quince leaves. TheScientificWorldJournal 2014:685975– doi:10.1155/2014/685975.
   PubMedGoogle Scholar
• Arslan‐Alaton, I. 2003. A review of the effects of dye‐assisting chemicals on advanced oxidation of reactive dyes in wastewater. Coloration Technology 119 (6):345–53. doi: Org/10/1111/j.1478-4408.2003.tb00196.x. doi:10.1111/j.1478-4408.2003.tb00196.x.
   Web of Science ®Google Scholar
• Bergey, D. H. 1994. Bergey’s manual of determinative bacteriology. Baltimore: Williams & Wilkins Company.
   Google Scholar
• Bugg, T. D., M. Ahmad, E. M. Hardiman, and R. Rahmanpour. 2011. Pathways for degradation of lignin in bacteria and fungi. Natural Product Reports 28 (12):1883–96. doi:10.1039/C1NP00042J.
   PubMed Web of Science ®Google Scholar
• Chen, C., and T. Li. 2016. Bacterial dye-decolorizing peroxidases: Biochemical properties and biotechnological opportunities. Physical Sciences Reviews 1 (9):20160051. doi:10.1515/psr-2016-0051.
   Google Scholar
• Chen, X., Y. Wang, F. Yang, Y. Qu, and X. Li. 2015. Isolation and characterization of Achromobacter sp. CX2 from symbiotic Cytophagales, a non-cellulolytic bacterium showing synergism with cellulolytic microbes by producing β-glucosidase. Annals of Microbiology 65 (3):1699–707. doi:10.1007/s13213-014-1009.
   Web of Science ®Google Scholar
• Collee, J. G., R. S. Miles, and B. Watt. 1996. Tests for identification of bacteria. Mackie and McCartney Practical Medical Microbiology 14:131–49.
   Google Scholar
• Dhankhar, P., V. Dalal, A. K. Sharma, and P. Kumar. 2022. Structural insights at acidic pH of dye‐decolorizing peroxidase from Bacillus subtilis. Proteins 91 (4):508–17. doi:10.1002/prot.26444.
   PubMed Web of Science ®Google Scholar
• Dhankhar, P., V. Dalal, V. Singh, A. K. Sharma, and P. Kumar. 2021. Structure of dye-decolorizing peroxidase from Bacillus subtilis in complex with veratryl alcohol. International Journal of Biological Macromolecules 193 (Pt A):601–8. doi:10.1016/j.ijbiomac.2021.10.100.
   PubMedGoogle Scholar
• Doddapaneni, K. K., R. Tatineni, R. Potumarthi, and L. N. Mangamoori. 2007. Optimization of media constituents through response surface methodology for improved production of alkaline proteases by Serratia rubidaea. Journal of Chemical Technology & Biotechnology 82 (8):721–9. doi:10.1002/jctb.1714.
   Web of Science ®Google Scholar
• Falade, A. O., O. A. Eyisi, L. V. Mabinya, U. U. Nwodo, and A. I. Okoh. 2017. Peroxidase production and ligninolytic potentials of fresh water bacteria Raoultella ornithinolytica and Ensifer adhaerens. Biotechnology Reports (Amsterdam, Netherlands)16:12–7. doi:10.1016/j.btrc.2017.10.001.
   PubMedGoogle Scholar
• Gita, S., A. Hussan, and T. G. Choudhury. 2017. Impact of textile dyes waste on aquatic environments and its treatment. Environmental Ecology 35 (3C):2349–53.
   Google Scholar
• Gunst, R. F., and G. C. McDonald. 1996. The importance of outcome dynamics, simple geometry, and pragmatic statistical arguments in exposing deficiencies of experimental design strategies. The American Statistician 50 (1):44–50. doi:10.1080/00031305.
   Web of Science ®Google Scholar
• Harish, B. S., T. Thayumanavan, R. Subashkumar, K. Gopal, and N. Kowsik Raj. 2023. Kinetics of dye decolorization using heterogeneous catalytic system with immobilized Achromobacter xylosoxidans DDB6. Preparative Biochemistry & Biotechnology 53:1–9. doi:10.1080/10826068.2023.2273487.
   PubMedGoogle Scholar
• Kheti, N. K., S. Rath, and H. Thatoi. 2023. Screening and Optimization of Manganese Peroxidase (MnP) production by Pseudoduganella violacea (SMB4), a bacterial isolate from Similipal Biosphere Reserve, Odisha and evaluation of Maillard reaction products degradation. Sustainable Chemistry for the Environment 2:100009. doi:10.1016/j.scenv.2023.100009.
   Google Scholar
• Kumar, R., and M. A. Barakat. 2013. Decolourization of hazardous brilliant green from aqueous solution using binary oxidized cactus fruit peel. Chemical Engineering Journal 226:377–83. doi:10.1016/j.cej.2013.04.063.
   Web of Science ®Google Scholar
• Lacey, L. A. 1997. Initial handling and diagnosis of diseased insects. Manual of techniques in insect pathology. Academic Press: 1-VIII. doi:10.1016/B978-012432555-5/50004-X.
   Google Scholar
• Larkin, A. A., and A. C. Martiny. 2017. Microdiversity shapes the traits, niche space, and biogeography of microbial taxa. Environmental Microbiology Reports 9 (2):55–70. doi:10.1111/1758-2229.12523.
   PubMed Web of Science ®Google Scholar
• Linde, D., C. Coscolín, C. Liers, M. Hofrichter, A. T. Martínez, and F. J. Ruiz-Dueñas. 2014. Heterologous expression and physicochemical characterization of a fungal dye-decolorizing peroxidase from Auricularia auricula-judae. Protein Expression and Purification 103:28–37. doi:10.1016/J.pep.2014.08.007.
   PubMed Web of Science ®Google Scholar
• Maniyam, M. N., A. L. Ibrahim, and A. E. Cass. 2020. Decolourization and biodegradation of azo dye methyl red by Rhodococcus strain UCC 0016. Environmental Technology 41 (1):71–85. doi:10.1080/09593330.2018.1491634.
   PubMed Web of Science ®Google Scholar
• Min, K., G. Gong, H. M. Woo, Y. Kim, and Y. Um. 2015. A dye-decolorizing peroxidase from Bacillus subtilis exhibiting substrate-dependent optimum temperature for dyes and β-ether lignin dimer. Scientific Reports 5 (1):8245. doi:10.1038/srep08245.
   PubMedGoogle Scholar
• Mohapatra, S., S. Padhy, P. K. D. Mohapatra, and H. N. Thatoi. 2018. Enhanced reducing sugar production by saccharification of lignocellulosic biomass, Pennisetum species through cellulase from a newly isolated Aspergillus fumigatus. Bioresource Technology 253:262–72. doi:10.1016/j.biortech.2018.01.023.
   PubMed Web of Science ®Google Scholar
• Pelczar, M. J. Jr, 1957. Manual of microbiological methods. New York: McGrow-Hill Book Co. Inc.
   Google Scholar
• Raina, N., P. S. Slathia, and P. Sharma. 2020. Response surface methodology (RSM) for optimization of thermochemical pretreatment method and enzymatic hydrolysis of deodar sawdust (DS) for bioethanol production using separate hydrolysis and co-fermentation (SHCF). Biomass Conversion and Biorefinery 12 (11):5175–95. doi:10.1007/s13399-020-00970-0.
   Web of Science ®Google Scholar
• Rath, S., M. Paul, H. K. Behera, and H. Thatoi. 2022. Response surface methodology mediated optimization of Lignin peroxidase from Bacillus mycoides isolated from Simlipal Biosphere Reserve, Odisha, India. Journal, Genetic Engineering & Biotechnology 20 (1):2. doi:10.1186/s43141-021-00284-2.
   PubMed Web of Science ®Google Scholar
• Santos, A., S. Mendes, V. Brissos, and L. O. Martins. 2014. New dye-decolorizing peroxidases from Bacillus subtilis and Pseudomonas putida MET94: Towards biotechnological applications. Applied Microbiology and Biotechnology 98 (5):2053–65. doi:10.1007/s00253-013-5041-4.
   PubMed Web of Science ®Google Scholar
• Singh, A. K., M. Bilal, H. M. Iqbal, A. S. Meyer, and A. Raj. 2021. Bioremediation of lignin derivatives and phenolics in wastewater with lignin modifying enzymes: Status, opportunities and challenges. The Science of the Total Environment 777:145988. doi:10.1016/j.scitotenv.2021.145988.
   PubMed Web of Science ®Google Scholar
• Singh, R. P., P. K. Singh, and R. L. Singh. 2014. Bacterial decolorization of textile azo dye acid orange by Staphylococcus hominis RMLRT03. Toxicology International 21 (2):160–6. doi:10.4103/0971-6580.139797.
   PubMedGoogle Scholar
• Smitha, K. V., and B. V. Pradeep. 2017. Application of Box-Behnken design for the optimization of culture conditions for novel fibrinolytic enzyme production by Bacillus altitudinis S-CSR 0020. Journal of Pure and Applied Microbiology 11 (3):1447–56. doi:10.22207/JPAM.11.3.28.
   Google Scholar
• Song, J., G. Han, Y. Wang, X. Jiang, D. Zhao, M. Li, Z. Yang, Q. Ma, R. E. Parales, Z. Ruan, et al. 2020. Pathway and kinetics of malachite green biodegradation by Pseudomonas veronii. Scientific Reports 10 (1):4502. doi:10.1038/s41598-020-61442-z.
   PubMed Web of Science ®Google Scholar
• Sugano, Y., Y. Matsushima, K. Tsuchiya, H. Aoki, M. Hirai, and M. Shoda. 2009. Degradation pathway of an anthraquinone dye catalyzed by a unique peroxidase DyP from Thanatephorus cucumeris Dec 1. Biodegradation 20 (3):433–40. doi:10.1007/s10532-008-9234-y.
   PubMed Web of Science ®Google Scholar
• Thatoi, H., S. Rath, and N. K. Kheti. 2023. Optimisation of Manganese Peroxidase (MnP) activity of Enterobacter wuhouensis using Response Surface Method and evaluation of Its maillard reaction products along with lignin degradation ability. Indian Journal of Microbiology 63 (4):604–20. doi:10.1007/s12088-023-01120-6.
   PubMed Web of Science ®Google Scholar
• Yang, X. Q., X. X. Zhao, C. Y. Liu, Y. Zheng, and S. J. Qian. 2009. Decolorization of azo, triphenylmethane and anthraquinone dyes by a newly isolated Trametes sp. SQ01 and its laccase. Process Biochemistry 44 (10):1185–9. doi:10.1016/j.procbio.2009.06.015.
   Web of Science ®Google Scholar
• Yolmeh, M., and S. M. Jafari. 2017. Applications of response surface methodology in the food industry processes. Food and Bioprocess Technology 10 (3):413–33. doi:10.1007/s11947-016-1855-2.
   Web of Science ®Google Scholar
• Yu, W., W. Liu, H. Huang, F. Zheng, X. Wang, Y. Wu, K. Li, X. Xie, and Y. Jin. 2014. Application of a novel alkali-tolerant thermostable DyP-type peroxidase from Saccharomonospora viridis DSM 43017 in biobleaching of eucalyptus kraft pulp. PloS One 9 (10):e110319. doi:10.1371/journal.pone.0110319.
   PubMed Web of Science ®Google Scholar
• Zabłocka-Godlewska, E., W. Przystaś, and E. Grabińska-Sota. 2014. Decolourisation of different dyes by two Pseudomonas strains under various growth conditions. Water, Air, and Soil Pollution 225 (2):1846. doi:10.1007/s11270-013-1846-0.
   PubMed Web of Science ®Google Scholar
• Zámocký, M., S. Hofbauer, I. Schaffner, B. Gasselhuber, A. Nicolussi, M. Soudi, K. F. Pirker, P. G. Furtmüller, and C. Obinger. 2015. Independent evolution of four heme peroxidase superfamilies. Archives of Biochemistry and Biophysics 574:108–19. doi:10.1016/j.abb.2014.12.025.
   PubMed Web of Science ®Google Scholar