Advanced search
Publication Cover
Mitochondrial DNA Part A
DNA Mapping, Sequencing, and Analysis
Volume 29, 2018 - Issue 2
Submit an article Journal homepage
58
Views
0
CrossRef citations to date
0
Altmetric
Letter to the Editor

No homology means there can be no analyses; a comment on Jose & Harikrishnan

Timothy J. PageAustralian Rivers Institute, Griffith University, Nathan, QLD, Australia; ;Water Planning Ecology, Queensland Dept. of Science, Information Technology and Innovation, Dutton Park, QLD, Australia; Correspondence[email protected]
&
Dirk SteinkeBiodiversity Institute of Ontario, University of Guelph, Guelph, ON, Canada
Pages 220-221 | Received 08 Sep 2016, Accepted 27 Nov 2016, Published online: 26 Dec 2016

References

  • Buhay JE. 2009. “COI-Like” sequences are becoming problematic in molecular systematic and DNA barcoding studies. J Crust Biol. 29:96–110.
  • Collins RA, Cruickshank RH. 2013. The seven deadly sins of DNA barcoding. Mol Ecol Resour. 13:969–975.
  • Costa FO, deWaard JR, Boutillier J, Ratnasingham S, Dooh RT, Hajibabaei M, Hebert PDN. 2007. Biological identifications through DNA barcodes: the case of Crustacea. Can J Fish Aquat Sci. 64:272–295.
  • Hay JM, Sarre SD, Daugherty CH. 2004. Nuclear mitochondrial pseudogenes as molecular outgroups for phylogenetically isolated taxa: a case study in Sphenodon. Heredity. 93:468–475.
  • Hebert PDN, Cywinska A, Ball SL, DeWaard JR. 2003. Biological identifications through DNA barcodes. Proc Biol Sci. 270:313–321.
  • Jose D, Harikrishnan M. 2016. Non-homologous COI barcode regions: a serious concern in decapod molecular taxonomy. Mitochondrial DNA Part A. doi: 10.3109/19401736.2015.1137902.
  • Lefébure T, Douady CJ, Gibert J. 2006. Relationship between morphological taxonomy and molecular divergence within Crustacea: proposal of a molecular threshold to help species delimitation. Mol Phylogenet Evol. 40:435–447.
  • Miller AD, Murphy NP, Burridge CP, Austin CM. 2005. Complete mitochondrial DNA sequences of the decapod crustaceans Pseudocarcinus gigas (Menippidae) and Macrobrachium rosenbergii (Palaemonidae). Mar Biotechnol. 7:339–349.
  • Page TJ, Hughes JM. 2010. Comparing the performance of multiple mitochondrial genes in the analysis of Australian freshwater fishes. J Fish Biol. 77:2093–2122.
  • Page TJ, Hughes JM. 2011. Neither molecular nor morphological data have all the answers; with an example from Macrobrachium (Decapoda: Palaemonidae) from Australia. Zootaxa. 2874:65–68.
  • Palumbi SR, Martin A, Romano S, McMillan WO, Stice L, Grabowski G. 1991. A simple fool's guide to PCR Honolulu. Honolulu, HI: University of Hawaii Press.
  • Raupach MJ, Radulovici AE. 2015. Looking back on a decade of barcoding crustaceans. Zookeys. 539:53–81.
  • Roe AD, Sperling FAH. 2007. Patterns of evolution of mitochondrial cytochrome c oxidase I and II DNA and implications for DNA barcoding. Mol Phylogenet Evol. 44:325–345.
  • Steinke D, Hanner R. 2011. The FISH-BOL collaborators' protocol. Mitochondrial DNA. 22:10–14.
  • Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. 2013. MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Biol Evol. 30:2725–2729.

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Order Reprints Request Corporate Permissions

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

Request Academic Permissions

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.

Related research

People also read lists articles that other readers of this article have read.

Recommended articles lists articles that we recommend and is powered by our AI driven recommendation engine.

Cited by lists all citing articles based on Crossref citations.
Articles with the Crossref icon will open in a new tab.