References
- de Souza AL, Seguro AC. Two centuries of meningococcal infection: from Vieusseux to the cellular and molecular basis of disease. J. Med. Microbiol.57(Pt 11), 1313–1321 (2008).
- Bernardini G, Braconi D, Martelli P, Santucci A. Postgenomics of Neisseria meningitidis for vaccines development. Expert Rev. Proteomics4(5), 667–677 (2007).
- Bernardini G, Braconi D, Santucci A. The analysis of Neisseria meningitidis proteomes: reference maps and their applications. Proteomics7(16), 2933–2946 (2007).
- Hacker J, Kaper JB, Pathogenicity islands and the evolution of microbes. Annu. Rev. Microbiol.54, 641–679 (2000).
- Bayliss CD, Hoe JC, Makepeace K, Martin P, Hood DW, Moxon ER. Neisseria meningitidis escape from the bactericidal activity of a monoclonal antibody is mediated by phase variation of lgtG and enhanced by a mutator phenotype. Infect. Immun.76(11), 5038–5048 (2008).
- Alm RA, Bina J, Andrews BM, Doig P, Hancock RE, Trust TJ. Comparative genomics of Helicobacter pylori: analysis of the outer membrane protein families. Infect. Immun.68(7), 4155–4168 (2000).
- Preston A, Parkhill J, Maskell DJ. The bordetellae: lessons from genomics. Nat. Rev. Microbiol.2(5), 379–390 (2004).
- Bryant PA, Venter D, Robins-Browne R, Curtis N. Chips with everything: DNA microarrays in infectious diseases. Lancet Infect. Dis.4(2), 100–111 (2004).
- Carter B, Wu G, Woodward MJ, Anjum MF. A process for analysis of microarray comparative genomics hybridisation studies for bacterial genomes. BMC Genomics9, 53 (2008).
- Budinska E, Gelnarova E, Schimek MG. MSMAD: a computationally efficient method for the analysis of noisy array CGH data. Bioinformatics25(6), 703–713 (2009) .
- Parkhill J, Achtman M, James KD et al. Complete DNA sequence of a serogroup A strain of Neisseria meningitidis Z2491. Nature404(6777), 502–506 (2000).
- Tettelin H, Saunders NJ, Heidelberg J et al. Complete genome sequence of Neisseria meningitidis serogroup B strain MC58. Science287(5459), 1809–1815 (2000).
- Bentley SD, Vernikos GS, Snyder LA et al. Meningococcal genetic variation mechanisms viewed through comparative analysis of serogroup C strain FAM18. PLoS Genet.3(2), E23 (2007).
- Snyder LAS, Jarvis SA, Saunders NJ. Complete and variant forms of the ‘Gonococcal Genetic Island’ in Neisseria meningitidis. Microbiology151(12), 4005–4013 (2005).
- Snyder LAS, Saunders NJ. The majority of genes in the pathogenic Neisseria species are present in non-pathogenic Neisseria lactamica including those designated as ‘virulence genes’. BMC Genomics7, 128 (2006).
- Peng JP, Zhang XB, Yang E et al. Characterization of serogroup C meningococci isolated from 14 provinces of China during 1966–2005 using comparative genomic hybridization. Sci. China C Life Sci.50(1), 1–6 (2007).
- Peng J, Yang L, Yang F et al. Characterization of ST-4821 complex, a unique Neisseria meningitidis clone. Genomics91(1), 78–87 (2008).
- Bille E, Zahar JR, Perrin A et al. A chromosomally integrated bacteriophage in invasive meningococci. J. Exp. Med.201(12), 1905–1913 (2005).
- Tzeng YL, Stephens DS. Epidemiology and pathogenesis of Neisseria meningitidis. Microbes Infect.2(6), 687–700 (2000).
- Hotopp JC, Grifantini R, Kumar N et al. Comparative genomics of Neisseria meningitidis: core genome, islands of horizontal transfer and pathogen-specific genes. Microbiology152(12), 3733–3749 (2006).
- Masignani V, Giuliani MM, Tettelin H, Comanducci M, Rappuoli R, Scarlato V. µ-like prophage in serogroup B Neisseria meningitidis coding for surface-exposed antigens. Infect. Immun.69(4), 2580–2588 (2001).
- Claus H, Vogel U, Swiderek H, Frosch M, Schoen C. Microarray analyses of meningococcal genome composition and gene regulation: a review of the recent literature. FEMS Microbiol. Rev.31(1), 43–51 (2007).
- Hitchen PG, Prior JL, Oyston PC et al. Structural characterization of lipo-oligosaccharide (LOS) from Yersinia pestis: regulation of LOS structure by the PhoPQ system. Mol. Microbiol.44(6), 1637–1650 (2002).
- Moss JE, Fisher PE, Vick B, Groisman EA, Zychlinsky A. The regulatory protein PhoP controls susceptibility to the host inflammatory response in Shigella flexneri. Cell. Microbiol.2(6), 443–452 (2000).
- Teng F, Wang L, Singh KV, Murray BE, Weinstock GM. Involvement of PhoP-PhoS homologs in Enterococcus faecalis virulence. Infect. Immun.70(4), 1991–1996 (2002).
- Adams P, Fowler R, Kinsella N et al. Proteomic detection of PhoPQ- and acid-mediated repression of Salmonella motility. Proteomics1(4), 597–607 (2001).
- Rahman MM, Kahler CM, Stephens DS, Carlson RW. The structure of the lipooligosaccharide (LOS) from the α-1,2-N-acetyl glucosamine transferase (rfaK(NMB)) mutant strain CMK1 of Neisseria meningitidis: implications for LOS inner core assembly and LOS-based vaccines. Glycobiology11(8), 703–709 (2001).
- Newcombe J, Jeynes JC, Mendoza E et al. Phenotypic and transcriptional characterization of the meningococcal PhoPQ system, a magnesium-sensing two-component regulatory system that controls genes involved in remodeling the meningococcal cell surface. J. Bacteriol.187(14), 4967–4975 (2005).
- Tzeng YL, Datta A, Ambrose K et al. The MisR/MisS two-component regulatory system influences inner core structure and immunotype of lipooligosaccharide in Neisseria meningitidis. J. Biol. Chem.279(33), 35053–35062 (2004).
- Tzeng YL, Kahler CM, Zhang X, Stephens DS. MisR/MisS two-component regulon in Neisseria meningitidis. Infect. Immun.76(2), 704–716 (2008).
- Ren J, Sainsbury S, Combs SE et al. The structure and transcriptional analysis of a global regulator from Neisseria meningitidis. J. Biol. Chem.282(19), 14655–14664 (2007).
- Wells DB, Tighe PJ, Wooldridge KG, Robinson K, Ala’ Aldeen DA. Differential gene expression during meningeal–meningococcal interaction: evidence for self-defense and early release of cytokines and chemokines. Infect. Immun.69(4), 2718–2722 (2001).
- Robinson K, Taraktsoglou M, Rowe KS, Wooldridge KG, Ala’ Aldeen DA. Secreted proteins from Neisseria meningitidis mediate differential human gene expression and immune activation. Cell. Microbiol.6(10), 927–938 (2004).
- Plant L, Asp V, Lövkvist L, Sundqvist J, Jonsson AB. Epithelial cell responses induced upon adherence of pathogenic Neisseria. Cell. Microbiol.6(7), 663–670 (2004).
- Bonnah RA, Muckenthaler MU, Carlson H et al. Expression of epithelial cell iron-related genes upon infection by Neisseria meningitidis. Cell. Microbiol.6(5), 473–484 (2004).
- Bonnah RA, Hoelter J, Steeghs L, Enns CA, So M, Muckenthaler MU. Lipooligosaccharide-independent alteration of cellular homeostasis in Neisseria meningitidis-infected epithelial cells. Cell. Microbiol.7(6), 869–885 (2005).
- Ovstebø R, Olstad OK, Brusletto B et al. Identification of genes particularly sensitive to lipopolysaccharide (LPS) in human monocytes induced by wild-type versus LPS-deficient Neisseria meningitidis strains. Infect. Immun.76(6), 2685–2695 (2008).
- Schubert-Unkmeir A, Sokolova O, Panzner U, Eigenthaler M, Frosch M. Gene expression pattern in human brain endothelial cells in response to Neisseria meningitidis. Infect. Immun.75(2), 899–914 (2007).
- Holland PC, Thompson D, Hancock S, Hodge D. Calciphylaxis, proteases, and purpura: an alternative hypothesis for the severe shock, rash, and hypocalcemia associated with meningococcal septicemia. Crit. Care Med.30(12), 2757–2761 (2002).
- Hoffmann I, Eugène E, Nassif X, Couraud PO, Bourdoulous S. Activation of ErbB2 receptor tyrosine kinase supports invasion of endothelial cells by Neisseria meningitidis. J. Cell Biol.55(1), 133–143 (2001).
- Linhartova I, Basler M, Ichikawa J et al. Meningococcal adhesion suppresses proapoptoticgene expression and promotes expression of genes supporting early embryonic and cytoprotective signaling of human endothelial cells. FEMS Microbiol. Lett.263(1), 109–118 (2006).
- Christodoulides M, Makepeace BL, Partridge KA et al. Interaction of Neisseria meningitidis with human meningeal cells induces the secretion of a distinct group of chemotactic, proinflammatory, and growth-factor cytokines. Infect. Immun.70(8), 4035–4044 (2002).
- Perkins-Balding D, Ratliff-Griffin M, Stojiljkovic I. Iron transport systems in Neisseria meningitidis. Microbiol. Mol. Biol. Rev.68(1), 154–171 (2004).
- Grifantini R, Sebastian S, Frigimelica E et al. Identification of iron-activated and -repressed Fur-dependent genes by transcriptome analysis of Neisseria meningitidis group B. Proc. Natl Acad. Sci. USA100(16), 9542–9547 (2003).
- Grifantini R, Frigimelica E, Delany I et al. Characterization of a novel Neisseria meningitidis Fur and iron-regulated operon required for protection from oxidative stress: utility of DNA microarray in the assignment of the biological role of hypothetical genes. Mol. Microbiol.54(4), 962–979 (2004).
- Delany I, Grifantini R, Bartolini E, Rappuoli R, Scarlato V. Effect of Neisseria meningitidis fur mutations on global control of gene transcription. J. Bacteriol.188(7), 2483–2492 (2006).
- Shaik YB, Grogan S, Davey M et al. Expression of the iron-activated nspA and secY genes in Neisseria meningitidis group B by Fur-dependent and -independent mechanisms. J. Bacteriol.189(2), 663–669 (2007).
- Basler M, Linhartová I, Halada P et al. The iron-regulated transcriptome and proteome of Neisseria meningitidis serogroup C. Proteomics6(23), 6194–6206 (2006).
- Eymann C, Homuth G, Scharf C, Hecker M. Bacillus subtilis functional genomics: global characterization of the stringent response by proteome and transcriptome analysis. J. Bacteriol.184(9), 2500–2520 (2002).
- Taraszka JA, Kurulugama R, Sowell RA et al. Mapping the proteome of Drosophila melanogaster: analysis of embryos and adult heads by LC-IMS-MS methods. J. Proteome Res.4(4), 1223–1237 (2005).
- Pichichero M, Casey J, Blatter M et al. Comparative trial of the safety and immunogenicity of quadrivalent (A, C, Y, W-135) meningococcal polysaccharide-diphtheria conjugate vaccine versus quadrivalent polysaccharide vaccine in two- to ten-year-old children. Pediatr. Infect. Dis. J.24, 57–62 (2005).
- de Moraes JC, Perkins BA, Camargo MC, Hidalgo NT, Barbosa HA, Sacchi CT et al. Protective efficacy of a serogroup B meningococcal vaccine in Sao Paulo, Brazil. Lancet340, 1074–1078 (1992).
- Mukhopadhyay TK, Halliwell D, O’Dwyer C et al. Rapid characterization of outer-membrane proteins in Neisseria lactamica by SELDI-TOF-MS (surface-enhanced laser desorption ionization-time-of-flight MS) for use in a meningococcal vaccine. Biotechnol. Appl. Biochem.41(2), 175–182 (2005).
- Williams JN, Skipp PJ, Humphries HE, Christodoulides M, O’Connor CD, Heckels JE. Proteomic analysis of outer membranes and vesicles from wild-type serogroup B Neisseria meningitidis and a lipopolysaccharide-deficient mutant. Infect. Immun.75(3), 1364–1372 (2007).
- Bernardini G, Arena S, Braconi D, Scaloni A, Santucci A. Novel identification of expressed genes and functional classification of hypothetical proteins from Neisseria meningitidis serogroup A. Proteomics7(18), 3342–3347 (2007).
- Finney M, Vaughan T, Taylor S et al. Characterization of the key antigenic components and pre-clinical immune responses to a meningococcal disease vaccine based on Neisseria lactamica outer membrane vesicles. Hum. Vaccin.4(1), 23–30 (2008).
- Gorringe AR. Can Neisseria lactamica antigens provide an effective vaccine to prevent meningococcal disease? Expert Rev. Vaccines4(3), 373–379 (2005).
- Pollard AJ, Frasch C. Development of natural immunity to Neisseria meningitidis. Vaccine19(11–12), 1327–1346 (2001).
- Gorringe AR, Oakhill J. Interactions of Neisseria meningitidis with the immune system. In: Emerging Strategies in the Fight Against Meningitis: Molecular and Cellular Aspects. Ferreirós C, Criado MT, Vázquez J (Eds). Horizon Scientific Press, Wymondham, UK 119–134 (2002).
- Sánchez S, Troncoso G, Ferreirós CM, Criado MT. Evaluation of cross-reactive antigens as determinants of cross-bactericidal activity in pathogenic and commensal Neisseria. Vaccine19(25–26), 3390–3398 (2001).
- Sánchez S, Abel A, Arenas J, Criado MT, Ferreirós CM. Cross-linking analysis of antigenic outer membrane protein complexes of Neisseria meningitidis. Res. Microbiol.157(2), 136–142 (2006).
- Wendisch VF, Bott M, Kalinowski J, Oldiges M, Wiechert W. Emerging Corynebacterium glutamicum systems biology. J. Biotechnol.124(1), 74–92 (2006).
- Medini D, Serruto D, Parkhill J et al. Microbiology in the post-genomic era. Nat. Rev. Microbiol.6(6), 419–430 (2008).
- Dethlefsen L, McFall-Ngai M, Relman DA. An ecological and evolutionary perspective on human-microbe mutualism and disease. Nature449(7164), 811–818 (2007).
- Scarselli M, Giuliani MM, Adu-Bobie J, Pizza M, Rappuoli R. The impact of genomics on vaccine design. Trends Biotechnol.23(2), 84–91 (2005).
- de Souza AL, Marques Salgado M, Romano CC et al. Cytokine activation in purulent pericarditis caused by Neisseria meningitidis serogroup C. Int. J. Cardiol.113(3), 419–421 (2006).
- de Souza AL, Sztajnbok J, Marques Salgado M et al. Compartmentalization of interleukin-6 response in a patient with septic meningococcal peritonitis. Clin. Vaccine Immunol.13(11), 1287–1290 (2006).
- Birkness KA, Guarner J, Sable SB et al. An in vitro model of the leukocyte interactions associated with granuloma formation in Mycobacterium tuberculosis infection. Immunol. Cell Biol.85(2), 160–118 (2007).
Website
- Genomeonline www.genomeonline.org