56
Views
4
CrossRef citations to date
0
Altmetric
Special Report

Approaches to understanding adaptations of skin color variation by detecting gene–environment interactions

, &
Pages 987-991 | Published online: 09 Jan 2014

References

  • Anno S, Abe T, Sairyo K et al. Interactions between SNP alleles at multiple loci and variation in skin pigmentation in 122 caucasians. Evol. Bioinform.3, 169–178 (2007).
  • Cheng F, Chen W, Richards E et al. SNP@evolution: a hierarchical database of positive selection on the human genome. BMC Evol. Biol.9(221), 1–8 (2009).
  • Barreiro LB, Laval G, Quach H et al. Natural selection has driven population differentiation in modern humans. Nat. Genet.40(3), 340–345 (2008).
  • Harris EE, Meyer D. The molecular signature of selection underlying human adaptations. Am. J. Phys. Anthropol.49, 89–130 (2006).
  • Sabeti PC, Schaffner SF, Fry B et al. Positive natural selection in the human lineage. Science312, 1614–1620 (2006).
  • Sturm RA. Molecular genetics of human pigmentation diversity. Hum. Mol. Genet.18(1), R9–R17 (2009).
  • Parra EJ. Human pigmentation variation: evolution, genetic basis, and implications for public health. Am. J. Phys. Anthropol.45(Suppl.), 85–105 (2007).
  • Voight BF, Kudaravalli S, Wen X et al. A map of recent positive selection in the human genome. PLoS Biol.4(3), 446–458 (2006).
  • Lao O, de Gruijter JM, van Duijn K et al. Signatures of positive selection in genes associated with human skin pigmentation as revealed from analyses of single nucleotide polymorphisms. Ann. Hum. Genet.71, 354–369 (2007).
  • Sabeti PC, Varilly P, Fry B et al. Genome wide detection and characterization of positive selection in human populations. Nature449(7164), 913–918 (2007).
  • Alonso S, Izagirre N, Smith-Zubiaga I et al. Complex signatures of selection for the melanogenic loci TYR, TYRP1 and DCT in humans. BMC Evol. Biol.8(74), 1–14 (2008).
  • Norton HL, Kittles RA, Parra E et al. Genetic evidence for the convergent evolution of light skin in Europeans and East Asians. Mol. Biol. Evol.24(3), 710–722 (2007).
  • Izagirre N, García I, Junquera C et al. A scan for signatures of positive selection in candidate loci for skin pigmentation in humans. Mol. Biol. Evol.23(9), 1697–1706 (2006).
  • Myles S, Somel M, Tang K et al. Identifying genes underlying skin pigmentation differences among human populations. Hum. Genet.120, 613–621 (2007).
  • McEvoy B, Beleza S, Shriver MD. The genetic architecture of normal variation in human pigmentation: an evolutionary perspective and model. Hum. Mol. Genet.15(2), R176–R181 (2006).
  • Sulem P, Gudbjartsson DF, Stacey SN et al. Genetic determinants of hair, eye and skin pigmentation in Europeans. Nat. Genet.39(12), 1443–1452 (2007).
  • Stokowski RP, Pant PV, Dadd T et al. A genomewide association study of skin pigmentation in a South Asian population. Am. J. Hum. Genet.81(6), 1119–1132 (2007).
  • Han J, Kraft P, Nan H et al. A genome-wide association study identifies novel alleles associated with hair color and skin pigmentation. PLoS Genet.4(5), 1–11 (2008).
  • Jablonski NG, Chaplin G. The evolution of human skin coloration. J. Hum. Evol.39, 57–106 (2000).
  • Chaplin G. Geographic distribution of environmental factors influencing human skin coloration. Am. J. Phys. Anthropol.125, 292–302 (2004).
  • Jablonski NG, Chaplin G. Human skin pigmentation as an adaptation to UV radiation. Proc. Natl Acad. Sci. USA107, 8962–8968 (2010).
  • Irizarry KJL, Merriman B, Bahamonde ME et al. The evolution of signaling complexity suggests a mechanism for reducing the genomic search space in human association studies. Mol. Psychiatry10, 14–26 (2005).
  • Murcray CE, Lewinger JP, Gauderman WJ. Gene–environment interaction in genome-wide association studies. Am. J. Epidemiol.169(2), 219–226 (2009).
  • Duell EJ, Bracci PM, Moore JH et al. Detecting pathway-based gene–gene and gene–environment interactions in pancreatic cancer. Cancer Epidemiol. Biomarkers Prev.17(6), 1470–1479 (2008).
  • McEachin RC, Keller BJ, Saunders EF et al. Modeling gene-by-environment interaction in comorbid depression with alcohol use disorders via an integrated bioinformatics approach. BioData Min.1, 1–13 (2008).
  • Roddick JF, Spiliopoulou M. A bibliography of temporal, spatial and spatio-temporal data mining research. SIGKDD Explorations1(1), 34–38 (1999).
  • Shekhar S, Chawla S. Spatial Databases: A Tour. Prentice Hall, NJ, USA (2003).

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.