The maternal perspective for five Slovenian regions: The importance of regional sampling

References

• Achilli A, Olivieri A, Pala M, Metspalu E, Fornarino S, Battaglia V, Accetturo M, et al. 2007. Mitochondrial DNA variation of modern Tuscans supports the near eastern origin of Etruscans. Am J Hum Genet 80:759–768
   PubMed Web of Science ®Google Scholar
• Achilli A, Rengo C, Magri C, Battaglia V, Olivieri A, Scozzari R, Cruciani F, et al. 2004. The molecular dissection of mtDNA haplogroup H confirms that the Franco-Cantabrian glacial refuge was a major source for the European gene pool. Am J Hum Genet 75:910–918
   PubMed Web of Science ®Google Scholar
• Andrews RM, Kubacka I, Chinnery PF, Lightowlers RN, Turnbull DM, Howell N. 1999. Reanalysis and revision of the Cambridge reference sequence for human mitochondrial DNA. Nat Genet 23:147
   PubMed Web of Science ®Google Scholar
• Augustin DH, Jeran N, Sarac J, Sarić T, Metspalu E, Reisberg T, Sujoldzić A, et al. 2012. Maternal genetic legacy of the eastern Adriatic island of Krk--an interplay of evolutionary forces and island's historical events in shaping the genetic structure of contemporary island population. Coll Antropol 36:353–362
   PubMedGoogle Scholar
• Barford PM. 2001. The Early Slavs. New York: Cornell University Press
   Google Scholar
• Bezlaj F. 1967. Eseji o slovenskem jeziku. Ljubljana: Mladinska knjiga
   Google Scholar
• Bramanti BM, Thomas G, Haak W, Unterlaender M, Jores P, Tambets K, Antanaitis-Jacobs I, et al. 2009. Genetic discontinuity between local hunter-gatherers and central Europe's first farmers. Science 326:137–140
   PubMed Web of Science ®Google Scholar
• Brandstätter A, Zimmermann B, Wagner J, Göbel T, Röck AW, Salas A, Carracedo A, et al. 2008. Timing and deciphering mitochondrial DNA macro-haplogroup R0 variability in Central Europe and Middle East. BMC Evol Biol 8:191
   PubMed Web of Science ®Google Scholar
• Brotherton P, Haak W, Templeton J, Brandt G, Soubrier J, Adler Jane C, Richards SM, et al. 2013. Neolithic mitochondrial haplogroup H genomes and the genetic origins of Europeans. Nat Commun 4:1764–1785
   PubMed Web of Science ®Google Scholar
• Di Rienzo A, Wilson AC. 1991. Branching pattern in the evolutionary tree for human mitochondrial DNA. Proc Natl Acad Sci USA 88:1597–1601
   PubMed Web of Science ®Google Scholar
• Excoffier L, Lischer HE. 2010. Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Mol Ecol Resour 10:564–567
   PubMed Web of Science ®Google Scholar
• Garcia O, Fregel R, Larruga JM, Alvarez V, Yurrebaso I, Cabrera VM, Gonzalez AM. 2011. Using mitochondrial DNA to test the hypothesis of a European post-glacial human recolonization from the Franco-Cantabrian refuge. Heredity (Edinb.) 106:37–45
   PubMed Web of Science ®Google Scholar
• Grafenauer B. 1950. Nekaj vprašanj iz dobe naseljevanja južnih Slovanov. Ljubljana: Zgodovinski časopis
   Google Scholar
• Haak W, Balanovsky O, Sanchez JJ, Koshel S, Zaporozhchenko V, Adler CJ, Der Sarkissian CS, et al. 2010. Ancient DNA from European early neolithic farmers reveals their near eastern affinities. PLoS Biol 8:e1000536
   PubMed Web of Science ®Google Scholar
• Haak W, Forster P, Bramanti B, Matsumura S, Brandt G, Tänzer M, Villems R, et al. 2005. Ancient DNA from the first European farmers in 7500-year-old Neolithic sites. Science 310:1016–1018
   PubMed Web of Science ®Google Scholar
• Hasegawa M, Di Rienzo A, Kocher TD, Wilson AC. 1993. Toward a more accurate time scale for the human mitochondrial DNA tree. J Mol Evol 37:347–354
   PubMed Web of Science ®Google Scholar
• Jeran N, Havas Augustin D, Grahovac B, Kapović M, Metspalu E, Villems R, Rudan P. 2009. Mitochondrial DNA heritage of Cres Islanders--example of Croatian genetic outliers. Coll Antropol 33:1323–1328
   PubMedGoogle Scholar
• Karachanak S, Grugni V, Fornarino S, Nesheva D, Al-Zahery N, Battaglia V, Carossa V, et al. 2013. Y-chromosome diversity in modern Bulgarians: new clues about their ancestry. PLoS One 8:e56779
   PubMed Web of Science ®Google Scholar
• Kolman CJ, Sambuughin N, Bermingham E. 1996. Mitochondrial DNA analysis of Mongolian populations and implications for the origin of New World founders. Genetics 142:1321–1334
   PubMed Web of Science ®Google Scholar
• Lacan M, Keyser C, Ricaut FX, Brucato N, Duranthon F, Guilaine J, Crubézy E, et al. 2011. Ancient DNA reveals male diffusion through the Neolithic Mediterranean route. Proc Natl Acad Sci USA 108:9788–9791
   PubMed Web of Science ®Google Scholar
• Macaulay V, Richards M, Hickey E, Vega E, Cruciani F, Guida V, Scozzari R, et al. 1999. The emerging tree of West Eurasian mtDNAs: a synthesis of control-region sequences and RFLPs. Am J Hum Genet 64:232–249
   PubMed Web of Science ®Google Scholar
• Malmström H, Gilbert MT, Thomas MG, Brandström M, Storå J, Molnar P, Andersen PK, et al. 2009. Ancient DNA reveals lack of continuity between neolithic hunter-gatherers and contemporary Scandinavians. Curr Biol 19:1758–1762
   PubMed Web of Science ®Google Scholar
• Malyarchuk B, Derenko M, Grzybowski T, Perkova M, Rogalla U, Vanecek T, Tsybovsky I. 2010. The peopling of Europe from the mitochondrial haplogroup U5 perspective. PLoS One 5:e10285
   PubMed Web of Science ®Google Scholar
• Malyarchuk BA, Rogozin IB, Berikov VB, Derenko MV. 2002. Analysis of phylogenetically reconstructed mutational spectra in human mitochondrial DNA control region. Hum Genet 111:46–53
   PubMed Web of Science ®Google Scholar
• Miller SA, Dykes DD, Polesky HF. 1988. A simple salting out procedure for extracting DNA from human nucleated cells. Nucleic Acids Res 16:1215
   PubMed Web of Science ®Google Scholar
• Ottoni C, Primativo G, Hooshiar Kashani B, Achilli A, Martínez-Labarga C, Biondi G, Torroni A, et al. 2010. Mitochondrial haplogroup H1 in north Africa: an early holocene arrival from Iberia. PLoS One 5:e13378
   PubMed Web of Science ®Google Scholar
• Pala M, Olivieri A, Achilli A, Accetturo M, Metspalu E, Reidla M, Tamm E, et al. 2012. Mitochondrial DNA signals of late glacial recolonization of Europe from near eastern refugia. Am J Hum Genet 90:915–924
   PubMed Web of Science ®Google Scholar
• Pereira L, Richards M, Goios A, Alonso A, Albarran C, Garcia O, Behar DM, et al. 2005. High-resolution mtDNA evidence for the late-glacial resettlement of Europe from an Iberian refugium. Genome Res 15:19–24
   PubMed Web of Science ®Google Scholar
• Pericić M, Barać Lauc L, Martinović Klarić I, Janićijević B, Rudan P. 2005. Review of Croatian genetic heritage as revealed by mitochondrial DNA and Y chromosomal lineages. Croat Med J 46:502–513
   PubMed Web of Science ®Google Scholar
• Pinhasi R, Thomas MG, Hofreiter M, Currat M, Burger J. 2012. The genetic history of Europeans. Trends Genet 28:496–505
   PubMed Web of Science ®Google Scholar
• Price Douglas T. 2000. Europe's First Farmers. Cambridge: Cambridge University Press
   Google Scholar
• Primorac D, Marjanović D, Rudan P, Villems R, Underhill PA. 2011. Croatian genetic heritage: Y-chromosome story. Croat Med J 52:225–234
   PubMed Web of Science ®Google Scholar
• Richards MB, Macaulay VA, Bandelt HJ, Sykes BC. 1998. Phylogeography of mitochondrial DNA in western Europe. Ann Hum Genet 62:241–260
   PubMed Web of Science ®Google Scholar
• Richards M, Macaulay V, Hickey E, Vega E, Sykes B, Guida V, Rengo C, et al. 2000. Tracing European founder lineages in the Near Eastern mtDNA pool. Am J Hum Genet 67:1251–1276
   PubMed Web of Science ®Google Scholar
• Richards M, Macaulay V, Torroni A, Bandelt HJ. 2002. In search of geographical patterns in European mitochondrial DNA. Am J Hum Genet 71:1168–1174
   PubMed Web of Science ®Google Scholar
• Sampietro ML, Lao O, Caramelli D, Lari M, Pou R, Martí M, Bertranpetit J, et al. 2007. Palaeogenetic evidence supports a dual model of Neolithic spreading into Europe. Proc Biol Sci 274:2161–2167
   PubMed Web of Science ®Google Scholar
• Šarac J, Šarić T, Jeran N, Auguštin DH, Metspalu E, Vekarić N, Missoni S, et al. 2012. Influence of evolutionary forces and demographic processes on the genetic structure of three Croatian populations: a maternal perspective. Ann Hum Biol 39:143–155
   PubMed Web of Science ®Google Scholar
• Serk P. 2004. Human Mitochondrial DNA haplogroup J in Europe and Near East. Faculty of Biology and Geography. Tartu, Estonia: Tartu University
   Google Scholar
• Soares P, Achilli A, Semino O, Davies W, Macaulay V, Bandelt HJ, Torroni A, et al. 2010. The archaeogenetics of Europe. Curr Biol 20:R174–R183
   PubMed Web of Science ®Google Scholar
• Soares P, Ermini L, Thomson N, Mormina M, Rito T, Rohl A, Salas A, et al. 2009. Correcting for purifying selection: an improved human mitochondrial molecular clock. Am J Hum Genet 84:740–759
   PubMed Web of Science ®Google Scholar
• Štih P, Simoniti V, Vodopivec P. 2008. “Slovenska zgodovina. Ljubljana: Inštitut za novejšo zgodovino
   Google Scholar
• Torroni A, Bandelt HJ, D'Urbano L, Lahermo P, Moral P, Sellitto D, Rengo C, et al. 1998. mtDNA analysis reveals a major late Paleolithic population expansion from southwestern to northeastern Europe. Am J Hum Genet 62:1137–1152
   PubMed Web of Science ®Google Scholar
• Torroni A, Bandelt HJ, Macaulay V, Richards M, Cruciani F, Rengo C, Martinez-Cabrera V, et al. 2001. A signal, from human mtDNA, of postglacial recolonization in Europe. Am J Hum Genet 69:844–852
   PubMed Web of Science ®Google Scholar
• van Oven M, Kayser M. 2009. Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation. Hum Mutat 30:E386–E394
   PubMed Web of Science ®Google Scholar
• Yao YG, Zhang YP. 2002. Phylogeographic analysis of mtDNA variation in four ethnic populations from Yunnan Province: new data and a reappraisal. J Hum Genet 47:311–318
   PubMed Web of Science ®Google Scholar
• Zupan A, Vrabec K, Glavač D. 2013. The paternal perspective of the Slovenian population and its relationship with other populations. Ann Hum Biol 40:515–526
   PubMed Web of Science ®Google Scholar
• Žužek A. 2007. Naselitev Slovanov v vzhodnoalpski prostor. Ljubljana: Zgodovinski časopis
   Google Scholar