Polymorphisms in genes encoding mt-tRNA in female breast cancer in Poland

References

• Achilli A, Rengo C, Battaglia V, Pala M, Olivieri A, Fornarino S, Magri C, Scozzari R, Babudri N, Santachiara-Benerecetti AS, Bandelt HJ, Semino O, Torroni A. 2005. Saami and Berbers-an unexpected mitochondrial DNA link. Am J Hum Genet. 76:883–886.
   PubMed Web of Science ®Google Scholar
• Bai RK, Leal SM, Covarrubias D, Liu A, Wong LJ. 2007. Mitochondrial genetic background modifies breast cancer risk. Cancer Res. 67:4687–4694.
   PubMed Web of Science ®Google Scholar
• Booker LM, Habermacher GM, Jessie BC, Sun QC, Baumann AK, Amin M, Lim SD, Fernandez-Golarz C, Lyles RH, Brown MD, Marshall FF, Petros JA. 2006. North American white mitochondrial haplogroups in prostate and renal cancer. J Urol. 175:468–472.
   PubMed Web of Science ®Google Scholar
• Canter JA, Kallianpur AR, Parl FF, Millikan RC. 2005. Mitochondrial DNA G10398A polymorphism and invasive breast cancer in African-American women. Cancer Res. 65:8028–8033.
   PubMed Web of Science ®Google Scholar
• Covarrubias D, Bai RK, Wong LJ, Leal SM. 2008. Mitochondrial DNA variant interactions modify breast cancer risk. J Hum Genet. 53:924–928.
   PubMed Web of Science ®Google Scholar
• Crimi M, Del Bo R, Galbiati S, Sciacco M, Bordoni A, Bresolin N, Comi PG. 2003. Mitochondrial A12308G polymorphism affects clinical features in patients with single mtDNA macrodeletion. Eur J Hum Genet. 11:896–898.
   PubMed Web of Science ®Google Scholar
• Czarnecka AM, Krawczyk T, Zdrozny M, Lubiński J, Arnold RS, Kukwa W, Scińska A, Golik P, Bartnik E, Petros JA. 2010. Mitochondrial NADH-dehydrogenase subunit 3 (ND3) polymorphism (A10398G) and sporadic breast cancer in Poland. Breast Cancer Res Treat. 121:511–518.
   PubMed Web of Science ®Google Scholar
• Darvishi K, Sharma S, Bhat AK, Rai E, Bamezai RN. 2007. Mitochondrial DNA G10398A polymorphism imparts maternal haplogroup N a risk for breast and esophageal cancer. Cancer Lett. 8:249–255.
   Google Scholar
• Gal A, Pentelenyi K, Remenyi V, Pal Z, Csanyi B, Tomory G, Rasko I, Molnar MJ. 2010. Novel heteroplasmic mutation in the anticodon stem of mitochondrial tRNALys associated with dystonia and stroke-like episodes. Acta Neurol Scand. 122:252–256.
   PubMed Web of Science ®Google Scholar
• Ghelli A, Porcelli AM, Zanna C, Vidoni S, Mattioli S, Barbieri A, Iommarini L, Pala M, Achilli A, Torroni A, Rugolo M, Carelli V. 2009. The background of mitochondrial DNA haplogroup J increases the sensitivity of Leber's hereditary optic neuropathy cells to 2,5-hexanedione toxicity. PLoS One. 19:e7922.
   Google Scholar
• Grasso M, Diegoli M, Brega A, Campana C, Tavazzi L, Arbustini E. 2001. The mitochondrial DNA mutation T12297C affects a highly conserved nucleotide of tRNA(Leu(CUN)) and is associated with dilated cardiomyopathy. Eur J Hum Genet. 9:311–315.
   PubMed Web of Science ®Google Scholar
• Hall TA. 1999. BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser. 41:95–98.
   Google Scholar
• Helm M, Brulé H, Friede D, Giegé R, Pütz D, Florentz C. 2000. Search for characteristic structural features of mammalian mitochondrial tRNAs. RNA. 6:1356–1379.
   PubMed Web of Science ®Google Scholar
• Herrnstadt C, Elson JL, Fahy E, Preston G, Turnbull DM, Anderson C, Ghosh SS, Olefsky JM, Beal MF, Davis RE, Howell N. 2002. Reduced-median-network analysis of complete mitochondrial DNA coding-region sequences from the major African, Asian, and European haplogroups. Am J Hum Genet. 70:1152–1171.
   PubMed Web of Science ®Google Scholar
• Hosgood HD, Liu CS, Rothman N, Weinstein SJ, Bonner MR, Shen M, Lim U, Virtamo J, Cheng WL, Albanes D, Lan Q. 2010. Mitochondrial DNA copy number and lung cancer risk in a prospective cohort study. Carcinogenesis. 31:847–849.
   PubMed Web of Science ®Google Scholar
• Huang X, Madan A. 1999. CAP3: A DNA sequence assembly program. Genome Res. 9:868–877.
   PubMed Web of Science ®Google Scholar
• Kivisild T, Shen P, Hall DP, Do B, Sung R, Davis K, Passarino G, Underhill PA, Scharfe C, Torroni A, Scozzari R, Modiano D, Coppa A, de Knijff P, Feldman M, Cavalli-Sforza LL, Oefner PJ. 2006. The role of selection in the evolution of human mitochondrial genomes. Genetics. 172:373–387.
   PubMed Web of Science ®Google Scholar
• Koilkonda RD, Guy J. 2011. Leber's hereditary optic neuropathy-gene therapy: From benchtop to bedside. J Ophthalmol. 2011:179412.
   PubMed Web of Science ®Google Scholar
• Lehtonen MS, Moilanen JS, Majamaa K. 2003. Increased variation in mtDNA in patients with familial sensorineural hearing impairment. Hum Genet. 113:220–227.
   PubMed Web of Science ®Google Scholar
• Maniura-Weber K, Helm M, Engemann K, Eckertz S, Mollers M, Schauen M, Hayrapetyan A, von Kleist-Retzow JC, Lightowlers RN, Bindoff LA, Wiesner RJ. 2006. Molecular dysfunction associated with the human mitochondrial 3302A>G mutation in the MTTL1 (mt-tRNALeu(UUR)) gene. Nucleic Acids Res. 34:6404–6415.
   PubMed Web of Science ®Google Scholar
• McFarland R, Elson JL, Taylor RW, Howell N, Turnbull DM. 2004. Assigning pathogenicity to mitochondrial tRNA mutations: When ‘definitely maybe’ is not good enough. Trends Genet. 20:591–596.
   PubMed Web of Science ®Google Scholar
• Mishmar D, Ruiz-Pesini E, Golik P, Macaulay V, Clark AG, Hosseini S, Brandon M, Easley K, Chen E, Brown MD, Sukernik RI, Olckers A, Wallace DC. 2003. Natural selection shaped regional mtDNA variation in humans. Proc Natl Acad Sci USA. 100:171–176.
   PubMed Web of Science ®Google Scholar
• Petros JA, Baumann AK, Ruiz-Pesini E, Amin MB, Sun CQ, Hall J, Lim S, Issa MM, Flanders WD, Hosseini SH, Marshall FF, Wallacem DC. 2005. mtDNA mutations increase tumorigenicity in prostate cancer. Proc Natl Acad Sci USA. 102:719–724.
   PubMed Web of Science ®Google Scholar
• Qu F, Liu X, Zhou F, Yang H, Bao G, He X, Xing J. 2011. Association between mitochondrial DNA content in leukocytes and colorectal cancer risk. Cancer. 117:3148–3155.
   PubMed Web of Science ®Google Scholar
• Ruiz-Pesini E, Mishmar D, Brandon M, Procaccio V, Wallace DC. 2004. Effects of purifying and adaptive selection on regional variation in human mtDNA. Science. 303:223–226.
   PubMed Web of Science ®Google Scholar
• Ruppert V, Nolte D, Aschenbrenner T, Pankuweit S, Funck R, Maisch B. 2004. Novel point mutations in the mitochondrial DNA detected in patients with dilated cardiomyopathy by screening the whole mitochondrial genome. Biochem Biophys Res Commun. 318:535–543.
   PubMed Web of Science ®Google Scholar
• Sakr WA. 2004. Epidemiology of prostate cancer and its precursors. Modern Pathol. 10 317: 1–10.
   Google Scholar
• Tan DJ, Bai RK, Wong LJC. 2002. Comprehensive scanning of somatic mitochondrial DNA mutations in breast cancer. Cancer Res. 62:972–976.
   PubMed Web of Science ®Google Scholar