Advanced search
Publication Cover
Mitochondrial DNA Part A
DNA Mapping, Sequencing, and Analysis
Volume 27, 2016 - Issue 4
Submit an article Journal homepage
147
Views
4
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

The complete chloroplast genome sequence of Fagopyrum cymosum

Jun YangInstitute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, China,
,
Chaolong LuInstitute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, China, ;Maize Research Institute, Sichuan Agricultural University, Wenjiang, China,
,
Qi ShenInstitute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, China, ;Guizhou Rapeseed Institute, Guizhou Province of Academy of Agricultural Sciences, Guiyang, China, and
,
Yuying YanInstitute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, China, ;Research Center of Buckwheat Industry Technology, Guizhou Normal University, Guiyang, China
,
Changjiang XuInstitute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, China, ;Research Center of Buckwheat Industry Technology, Guizhou Normal University, Guiyang, China
&
Chi SongInstitute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, China, Correspondence[email protected]
Pages 2410-2411 | Received 30 Jan 2015, Accepted 14 Mar 2015, Published online: 29 Jun 2015

References

  • Abouelhoda MI, Kurtz S, Ohlebusch E. (2004). Replacing suffix trees with enhanced suffix arrays. J Dis Algor 2:53–86
  • Demidenko NV, Logacheva MD, Penin AA. (2011). Selection and validation of reference genes for quantitative real-time PCR in buckwheat (Fagopyrum esculentum) based on transcriptome sequence data. PLoS One 6:e19434
  • Huang H, Shi C, Liu Y, Mao SY, Gao LZ. (2014). Thirteen Camellia chloroplast genome sequences determined by high-throughput sequencing: Genome structure and phylogenetic relationships. BMC Evol Biol 14:151
  • Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, McWilliam H, Valentin F, et al. (2007). Clustal W and Clustal X version 2.0. Bioinformatics 23:2947–8
  • Liu C, Shi L, Zhu Y, Chen H, Zhang J, Lin X, Guan X. (2012). CpGAVAS, an integrated web server for the annotation, visualization, analysis, and GenBank submission of completely sequenced chloroplast genome sequences. BMC Genomics 13:715
  • Logacheva MD, Samigullin TH, Dhingra A, Penin AA. (2008). Comparative chloroplast genomics and phylogenetics of Fagopyrum esculentum ssp. ancestrale – A wild ancestor of cultivated buckwheat. BMC Plant Biol 8:59
  • Lowe TM, Eddy SR. (1997). tRNA scan – SE: A program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res 25:0955–64
  • Luo RB, Liu BH, Xie YL, Li ZY, Huang WH, Yuan JY, He GH, et al. (2012). SOAPdenovo2: An empirically improved memory-efficient short-read de novo assembler. GigaScience 1:18
  • Patel RK, Jain M. (2012). NGS QC Toolkit: A toolkit for quality control of next generation sequencing data. PLoS One 7:e30619
  • Qian J, Song J, Gao H, Zhu Y, Xu J, Pang X, Yao H, et al. (2013). The complete chloroplast genome sequence of the medicinal plant Salvia miltiorrhiza. PLoS One 8:e57607
  • Qin YX, Ma G, Yu Q, Wang L, Wang L, Kong L, Kim W, et al. (2014). Evolutionary history of Trihelix family and their functional diversification. DNA Res 21:499–510
  • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. (2011). MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28:2731–9
  • Thwe AA, Kim JK, Li X, Kim YB, Uddin MR, Kim SJ, Suzuki T, et al. (2013). Metabolomic analysis and phenylpropanoid biosynthesis in hairy root culture of tartary buckwheat cultivars. PloS One 8:e65349
  • Yamane K, Yasui Y, Ohnishi O. (2003). Intraspecific cpDNA variations of diploid and tetraploid perennial buckwheat, Fagopyrum cymosum (Polygonaceae). Am J Bot 90:339–46
  • Zeng FC, Gao CW, Gao LZ. (2014). The complete chloroplast genome sequence of American bird pepper (Capsicum annuum var. glabriusculum). Mitochondrial DNA . [Epub ahead of print]. doi:10.3109/19401736.2014.913160

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Order Reprints Request Corporate Permissions

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

Request Academic Permissions

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.

Related research

People also read lists articles that other readers of this article have read.

Recommended articles lists articles that we recommend and is powered by our AI driven recommendation engine.

Cited by lists all citing articles based on Crossref citations.
Articles with the Crossref icon will open in a new tab.