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Mitochondrial DNA Part A
DNA Mapping, Sequencing, and Analysis
Volume 27, 2016 - Issue 5
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Mitogenome Announcement

The whole chloroplast genomes of two Eutrema species (Brassicaceae)

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Pages 3727-3728 | Received 21 Jul 2015, Accepted 02 Aug 2015, Published online: 02 Sep 2015

References

  • Al-Shehbaz IA, O’Kane SL. (1995). Placement of Arabidopsis parvula in Thellungiella (Brassicaceae). Novon 5:309–10
  • Al-Shehbaz IA, Warwick SI. (2005). A synopsis of Eutrema (Brassicaceae). Harv Paper Bot 10:129–35
  • Jarvis DE, Ryu CH, Beilstein MA, Schumaker KS. (2014). Distinct roles for SOS1 in the convergent evolution of salt tolerance in Eutrema salsugineum and Schrenkiella parvula. Mol Biol Evol 31:2094–107
  • Katoh K, Standley DM. (2013). MAFFT multiple sequence alignment software version 7: Improvements in performance and usability. Mol Biol Evol 30:772–80
  • Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, et al. (2012). Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics 28:1647–9
  • Koch MA, German DA. (2013). Taxonomy and systematics are key to biological information: Arabidopsis, Eutrema (Thellungiella), Noccaea and Schrenkiella (Brassicaceae) as examples. Front Plant Sci 4:267
  • Lewis SE, Searle SM, Harris N, Gibson M, Lyer V, Richter J, Wiel C, et al. (2002). Apollo: A sequence annotation editor. Genome Biol 3:1–14
  • Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, et al. (2009). The sequence alignment/map format and SAMtools. Bioinformatics 25:2078–9
  • Liu C, Shi L, Zhu Y, Chen H, Zhang J, Lin X, Guan X. (2012). CpGAVAS, an integrated web server for the annotation, visualization, analysis, and GenBank submission of completely sequenced chloroplast genome sequences. BMC Genomics 13:715
  • Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. (2013). MEGA6: Molecular evolutionary genetics analysis version 6.0. Mol Biol Evol 30:2725–9
  • Yang R, Jarvis DE, Chen H, Beilstein MA, Grimwood J, Jenkins J, Shu S, et al. (2013). The reference genome of the halophytic plant Eutrema salsugineum. Front Plant Sci 4:46
  • Zerbino DR, Birney E. (2008). Velvet: Algorithms for de novo short read assembly using de Bruijn graphs. Genome Res 18:821–9

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