Services of DNA barcoding in different fields

References

• Albrechtsen L, David WMA, Paul JJ. (2007). Faunal loss from bushmeat hunting: Empirical evidence and policy implications in Bioko Island. Environ Sci Policy 10:654–67.
   Web of Science ®Google Scholar
• Alcaide M, Rico C, Ruiz S, Soriguer R, Munoz J, Figuerola J. (2009). Disentangling vector-borne transmission networks: A universal DNA barcoding method to identify vertebrate hosts from arthropod bloodmeals. PLoS One 4:e7092.
   PubMed Web of Science ®Google Scholar
• Alcántar-Escalera FJ, Garcia-Varela M, Vazquez-Dominguez E, Perez-Ponce de Leon G. (2013). Using DNA barcoding to link cystacanths and adults of the acanthocephalan Polymorphus brevis in central Mexico. Mol Ecol Res 13:1116–24.
   PubMed Web of Science ®Google Scholar
• Alfonsi E, Meheust E, Fuchs S, Carpentier F-G, Quillivic Y, Viricel A, Hassani S, Jung J-L. (2013). The use of DNA barcoding to monitor the marine mammal biodiversity along the French Atlantic coast. ZooKeys 365:5–24.
   Web of Science ®Google Scholar
• Aliabadian M, Kaboli M, Nijman V, Vences M. (2009). Molecular identification of birds: Performance of distance-based DNA barcoding in three genes to delimit parapatric species. PLoS ONE 4:e4119.
   PubMed Web of Science ®Google Scholar
• Aly SM, Wen J, Wang X. (2013). Identification of forensically important Sarcophagidae (Diptera) based on partial mitochondrial cytochrome oxidase I and II genes. Am J Forensic Med Pathol 34:159–63.
   PubMed Web of Science ®Google Scholar
• Aly SM, Wen J. (2013). Applicability of partial characterization of cytochrome oxidase I in identification of forensically important flies (Diptera) from China and Egypt. Parasitol Res 112:2667–74.
   PubMed Web of Science ®Google Scholar
• Aly SM. (2014). Reliability of long vs short COI markers in identification of forensically important flies. Croat Med J 55:19–26.
   PubMed Web of Science ®Google Scholar
• Amendt J, Krettek R, Zehner R. (2004). Forensic entomology. Naturwissenschaften 91:51–65.
   PubMed Web of Science ®Google Scholar
• Armstrong K. (2010). DNA barcoding: A new module in New Zealand’s plant biosecurity diagnostic toolbox. EPPO Bulletin 40:91–100.
   Google Scholar
• Armstrong KF, Ball SL. (2005). DNA barcodes for biosecurity: Invasive species identification. Philos Trans R Soc Lond, B, Biol Sci 360:1813–23.
   PubMed Web of Science ®Google Scholar
• Ashfaq M, Hebert PDN, Mirza JH, Khan AM, Zafar Y, Mirza S. (2014). Analyzing mosquito (Diptera: Culicidae) diversity in Pakistan by DNA barcoding. PLoS One. 9:e97268.
   PubMed Web of Science ®Google Scholar
• Ashfaq M, Akhtar S, Khan AM, Adamowicz SJ, Hebert PDN. (2013). DNA barcode analysis of butterfly species from Pakistan points towards regional endemism. Mol Ecol Resour 13:832–43.
   PubMed Web of Science ®Google Scholar
• Atkinson N. (2004). Taxonomy isn’t black and white. The Scientist. Available at: http://www.biomedcentral.com/news/20040928/02 (Accessed 28 December 2004)
   Google Scholar
• Baker CS. (2008). A truer measure of the market: The molecular ecology of fisheries and wildlife trade. Mol Ecol 17:3985–98.
   PubMed Web of Science ®Google Scholar
• Barbuto M, Galimberti A, Ferri E, Labra M, Malandra RP, Galli P, Casiraghi M. (2010). DNA barcoding reveals fraudulent substitutions in shark seafood products: The Italian case of “palombo” (Mustelus spp.). Food Res Int 43:376–81.
   Web of Science ®Google Scholar
• Barrett RDH, Hebert PDN. (2005). Identifying spiders through DNA barcodes. Can J Zool 83:481–91.
   Web of Science ®Google Scholar
• Barth D, Krenek S, Fokin SI, Berendonk TU. (2006). Intraspecific genetic variation in Paramecium revealed by mitochondrial cytochrome C oxidase I sequences. J Eukaryot Microbiol 53:20–5.
   PubMed Web of Science ®Google Scholar
• Becker S, Hanner R, Steinke D. (2011). Five years FISH-BOL: Brief status report. Mitochondrial DNA 22:3–9.
   PubMed Web of Science ®Google Scholar
• Besansky NJ, Severson W, Ferdig T. (2003). DNA barcoding of parasites and invertebrate disease vectors: What you don't know can hurt you. Trends Parasitol 19:545–6.
   PubMed Web of Science ®Google Scholar
• Bianchi FJ, Schellhorn NA, Cunningham SA. (2013). Habitat functionality for the ecosystem service of pest control: Reproduction and feeding sites of pests and natural enemies. Agric for Entomol 15:12–23.
   Web of Science ®Google Scholar
• Bickford D, Lohman DJ, Sodhi NS, Ng PKL, Meier R, Winker K, Ingram KK, Das I. (2007). Cryptic species as a window on diversity and conservation. Trends Ecol Evol (Amst) 22:148–55.
   PubMed Web of Science ®Google Scholar
• Binford GJ, Callahan MS, Bodner MR, Rynerson MR, Nunez PB, Ellison CE, Duncan RP. (2008). Phylogenetic relationships of Loxosceles and Sicarius spiders are consistent with Western Gondwanan vicariance. Mol Phylogenet Evol 49:538–53.
   PubMed Web of Science ®Google Scholar
• Birky CW. (2001). The inheritance of genes in mitochondria and chloroplasts: Laws, mechanisms, and models. Annu Rev Genet 35:125–48.
   PubMed Web of Science ®Google Scholar
• Blagoev GA, Nikolova NI, Sobel CN, Hebert PDN, Adamowicz SJ. (2013). Spiders (Araneae) of Churchill, Manitoba: DNA barcodes and morphology reveal high species diversity and new Canadian records. BMC Ecol 13:44. doi:10.1186/1472-6785-13-44.
   PubMed Web of Science ®Google Scholar
• Blaxter M. (2003). Molecular systematics: Counting angels with DNA. Nature 421:122–4
   PubMed Web of Science ®Google Scholar
• Blaxter M, Floyd R. (2003). Molecular taxonomics for biodiversity surveys: Already a reality. Trends Ecol E 18:268–9.
   Web of Science ®Google Scholar
• Blaxter M, Mann J, Chapman T, et al. (2005). Defining operational taxonomic units using DNA barcode data. Philos Trans R Soc Lond, B, Biol Sci 360:1935–43.
   PubMed Web of Science ®Google Scholar
• Blaxter ML. (2004). The promise of a DNA taxonomy. Philos Trans R Soc Lond, B, Biol Sci 359:669–79.
   PubMed Web of Science ®Google Scholar
• Bourke BP, Oliveira TP, Suesdek L, Bergo ES, Sallum MA. (2013). A multi-locus approach to barcoding in the Anopheles strodei subgroup (Diptera: Culicidae). Parasit Vectors 6:111. doi: 10.1186/1756-3305-6-111.
   PubMed Web of Science ®Google Scholar
• Bradley R, Baker R. (2001). A test of the genetic species concept: Cytochrome-b sequences and mammals. J Mammal 82:960–73
   Web of Science ®Google Scholar
• Brower AVZ. (2006). Problems with DNA barcodes for species delimitation: ‘Ten species’ of Astraptes fulgerator reassessed (Lepidoptera: Hesperiidae). Syst Biodiv 4:127–32.
   Web of Science ®Google Scholar
• Brown JW, Miller SE, Horak M. (2003). Studies on New Guinea moths. 2. Description of a new species of Xenothictis Meyrick (Lepidoptera: Tortricidae: Archipini). Proc Entomol Soc Wash 105:1043–50.
   Web of Science ®Google Scholar
• Burns JM, Janzen DH, Hallwachs W. (2010). Of many similar species in the Neotropical genus Porphyrogenes (Lepidoptera: Hesperiidae), a new one, repeatedly reared in Costa Rica, is relatively distinct. Proc Entomol Soc Wash 112:32–42.
   Web of Science ®Google Scholar
• Burns JM, Janzen DH, Hajibabaei M, Hallwachs W, Hebert PDN. (2008). DNA barcodes and cryptic species of skipper butterflies in the genus Perichares in Area de Conservación Guanacaste, Costa Rica. Proc Natl Acad Sci 105:6350–5
   PubMed Web of Science ®Google Scholar
• Cameron S, Rubinoff D, Will K. (2006). Who will actually use DNA barcoding and what will it cost? Syst Biol 55:844–47.
   PubMed Web of Science ®Google Scholar
• Carvalho DC, Oliveira DAA, Pompeu PS, Leal CG, Oliveira C, Hanner R. (2011). Deep barcode divergence in Brazilian freshwater fishes: The case of the Sao Francisco River Basin. Mitochondrial DNA 22:1–7.
   Web of Science ®Google Scholar
• Carvalho MR, Bockmann FA, Amorim DS, Brandao CR. (2008). Systematics must embrace comparative biology and evolution, not speed and automation. Evol Biol 35:150–57.
   Web of Science ®Google Scholar
• Catts EP, Goff ML. (1992). Forensic entomology in criminal investigations. Annu Rev Entomol 37:253–72.
   PubMed Web of Science ®Google Scholar
• CBOL Plant Working Group (2009). A DNA barcode for land plants. Proc Natl Acad Sci USA 106:12794–7.
   PubMed Web of Science ®Google Scholar
• Chantangsi C, Lynn DH, Brandl MT, Cole JC, Hetrick N, et al. (2007). Barcoding ciliates: A comprehensive study of 75 isolates of the genus Tetrahymena. Int J Syst Evol Microbiol 57:2412–25.
   PubMed Web of Science ®Google Scholar
• Chase MW, Salamin N, Wilkinson M, Dunwell JM, Kesanakurthi RP, Haidar N, Savolainen V. (2005). Land plants and DNA barcodes: Short-term and long-term goals. Philos Trans R Soc Lond, B, Biol Sci 360:1889–95.
   PubMed Web of Science ®Google Scholar
• Cho Y, Mower JP, Qiu YL, Palmer JD. (2004). Mitochondrial substitution rates are extraordinarily elevated and variable in a genus of flowering plants. Proc Natl Acad Sci USA 101:17741–6.
   PubMed Web of Science ®Google Scholar
• Clare EL, Fraser EE, Braid HE, Fenton MB, Hebert PDN. (2009). Species on the menu of a generalist predator, the eastern red bat (Lasiurus borealis): Using a molecular approach to detect arthropod prey. Mol Ecol 18:2532–42.
   PubMed Web of Science ®Google Scholar
• Clare EL, Lim BK, Engstrom MD, Eger JL, Hebert PDN. (2007). DNA barcoding of Neotropical bats: Species identification and discovery within Guyana. Mol Ecol Notes 7:184–90.
   Web of Science ®Google Scholar
• Clerck OD, Guiry MD, Leliaert F, Samyn Y, Verbruggen H. (2013). Algal taxonomy: A road to nowhere? J Phycol 49:215–25.
   PubMed Web of Science ®Google Scholar
• Cognato AI. (2006). Standard percent DNA sequence difference for insects does not predict species boundaries. J Econ Entomol 99:1037–45.
   PubMed Web of Science ®Google Scholar
• Consortium for the Barcode of Life. (2009). CBOL approves matK and rbcL as the BARCODE regions for Land Plants. Available at: http://www.barcoding.si.edu/PDF/PlantWG/CBOL%20Decision%20%20Plant%20Barcode%20Regions.pdf (Accessed 15 October 2010).
   Google Scholar
• Cowen RK, Paris CB, Srinivasan A. (2006). Scaling of connectivity in marine populations. Science 311:522–7.
   PubMed Web of Science ®Google Scholar
• Cox AJ, Hebert PDN. (2001). Colonization, extinction and phylogeographic patterning in a freshwater crustacean. Mol Ecol 10: 371–86
   PubMed Web of Science ®Google Scholar
• Coyne JA, Orr HA. (2004). Speciation. Sunderland, MA: Sinauer Associates.
   Google Scholar
• Crawford AJ, ALonso R, Jaramillo C, Sucre S, Ibanez R. (2011). DNA barcoding identifies a third invasive species of Eleutherodactylus (Anura: Eleutherodactylidae) in Panama City, Panama. Zootaxa 2890:65–7.
   Google Scholar
• Cywinska A, Hunter FF, Heber PDN. (2006). Identifying Canadian mosquito species through DNA barcodes. Med Vet Entomol 20:413–24.
   PubMed Web of Science ®Google Scholar
• Dasmahapatra KK, Elias M, Hill RI, Hoffman JI, Mallet J. (2010). Mitochondrial DNA barcoding detects some species that are real, and some that are not. Mol Ecol Resour 10:264–73.
   PubMed Web of Science ®Google Scholar
• Davidson LN, Evans EW. (2010). Frass analysis of diets of aphidophagous lady beetles (Coleoptera: Coccinellidae) in Utah alfalfa fields. Environ Entomol 39:576–82.
   PubMed Web of Science ®Google Scholar
• Deans AR, Yoder MJ, Balhoff JP. (2012). Time to change how we describe biodiversity. Trends Ecol Evol (Amst) 27:78–84.
   PubMed Web of Science ®Google Scholar
• Decaens T, Rougerie R. (2008). Descriptions of two new species of Hemileucinae (Lepidoptera: Saturniidae) from the region of Muzo in Colombia – evidence from morphology and DNA barcodes. Zootaxa 34–52.
   Web of Science ®Google Scholar
• Decelle J, Suzuki N, Mahe F, de Vargas C, Not F. (2012). Molecular phylogeny and morphological evolution of the Acantharia (Radiolaria). Protist 163:435–50.
   PubMed Web of Science ®Google Scholar
• Desalle R, Egan MG, Siddal M. (2005). The unholy trinity: Taxonomy, species delimitation and DNA barcoding. Philos Trans R Soc Lond, B, Biol Sci 360:1905–16.
   PubMed Web of Science ®Google Scholar
• Desalle R. (2006). Species discovery versus species identification in DNA barcoding efforts: Response to Rubinoff. Conserv Biol 20:1545–7.
   PubMed Web of Science ®Google Scholar
• Dhananjeyan KJ, Paramasivan R, Tewari SC, Rajendran R, Thenmozhi V, Jerald V, Leo S, et al. (2010). Molecular identification of mosquito vectors using genomic DNA isolated from eggshells, larval and pupal exuvium. Trop Biomed 27:47–53.
   PubMed Web of Science ®Google Scholar
• Dittrich G, Conlong DE, Mitchell A. (2006). Genetic diversity of Sturmiopsis parasitica Curran (Diptera: Tachinidae). Annales De La Société Entomologique De France 42:325–9.
   Web of Science ®Google Scholar
• Doskocil JP, Walker NR, Bell GE, Marek SM, Reinert JA, Royer TA. (2008). Species composition and seasonal occurrence of Phyllophaga (Coleoptera: Scarabaeidae) infesting intensely managed Bermudagrass in Oklahoma. J Econ Entomol 101:1624–32.
   PubMed Web of Science ®Google Scholar
• Doyle JJ, Gaut BS. (2000). Evolution of genes and taxa: A primer. Plant Mol Biol 42:1–6
   PubMed Web of Science ®Google Scholar
• Dunshea G. (2009). DNA-based diet analysis for any predator. PLoS One 4:e5252.
   PubMed Web of Science ®Google Scholar
• Eaton MJ, Meyers GL, Kolokotronis S-O, Leslie MS, Martin AP, Amato G. (2012). Barcoding bushmeat: Molecular identification of Central African and South American harvested vertebrates. Conserv Genet 11:1389–404.
   Web of Science ®Google Scholar
• Ebach MC, Holdrege C. (2005a). DNA barcoding is no substitute for taxonomy. Nature 434:697.
   PubMed Web of Science ®Google Scholar
• Ebach MC, Holdrege C. (2005b). More taxonomy, not DNA barcoding. BioScience 55:822–3.
   Web of Science ®Google Scholar
• Edwards D, Horn A, Taylor D, Savolainen V, Hawkins JA. (2008). DNA barcoding of a large genus, Aspalathus L. (Fabaceae). Taxon 57:1317–27.
   Web of Science ®Google Scholar
• Ekrem T, Willassen E, Stur E. (2007). A comprehensive DNA sequence library is essential for identification with DNA barcodes. Mol Phylogenet Evol 43:530–42.
   PubMed Web of Science ®Google Scholar
• Elias M, Hill RI, Willmott KR, Dasmahapatra KK, Brower AVZ, Mallet J, Jiggins CD. (2007). Limited performance of DNA barcoding in a diverse community of tropical butterflies. Proc Biol Sci 274:2881–9.
   PubMed Web of Science ®Google Scholar
• Elsasser SC, Floyd R, Hebert PDN, Albrecht I, Hostedde S. (2009). DNA Barcoding, species identification of North American guinea worms (Nematoda: Dracunculus) with DNA barcoding. Mol Ecol Resour 9:707–12.
   PubMed Web of Science ®Google Scholar
• Erzinclioglu YZ. (1983). The application of entomology to forensic medicine. Med Sci Law 23:57–63.
   PubMed Web of Science ®Google Scholar
• Etzler FE, Wanner KW, Morales-Rodriguez A, Ivie MA. (2014). DNA barcoding to improve the species-level management of wireworms (Coleoptera: Elateridae). J Econ Entomol 107:1476–85.
   PubMed Web of Science ®Google Scholar
• Evans KM, Wortley AH, Mann DG. (2007). An assessment of potential diatom “barcode” genes (cox1, rbcL, 18S and ITS rDNA) and their effectiveness in determining relationships in Sellaphora (Bacillariophyta). Protist 158:349–64.
   PubMed Web of Science ®Google Scholar
• Farrell LE, Roman J, Sunquist ME. (2000). Dietary separation of sympatric carnivores identified by molecular analysis of scats. Mol Ecol 9:1583–90.
   PubMed Web of Science ®Google Scholar
• Fazekas AJ, Kesanakurti PR, Burgess KS, Percy DM, Graham SW, Barrett SC, Newmaster SG, et al. (2009). Are plant species inherently harder to discriminate than animal species using DNA barcoding markers? Mol Ecol Resour 9:130–39.
   PubMed Web of Science ®Google Scholar
• Fazekas AJ, Burgess KS, Kesanakurti PR, Graham SW, Newmaster SG, Husband BC, Percy DM, et al. (2008). Multiple multilocus DNA barcodes from the plastid genome discriminate plant species equally well. PLoS One 3:e2802.
   PubMed Web of Science ®Google Scholar
• Ferri E, Barbuto M, Bain O, Galimberti A, Uni S, Guerrero R, Ferte H, et al. (2009). Integrated taxonomy: Traditional approach and DNA barcoding for the identification of filarioid worms and related parasites (Nematoda). Front Zool 6:1. doi:10.1186/1742-9994-6-1.
   PubMed Web of Science ®Google Scholar
• Filonzi L, Stefania C, Marina V, Francesco NM. (2010). Molecular barcoding reveals mislabelling of commercial fish products in Italy. Food Res Int 43:1383–8.
   Web of Science ®Google Scholar
• Finlay BJ. (2004). Protist taxonomy: an ecological perspective. Philos Trans R Soc Lond, B, Biol Sci 359:599–610.
   PubMed Web of Science ®Google Scholar
• Folmer O, Black M, Hoeh W, Lutz R, Vrijenhoek R. (1994). DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Mol Marine Biol Biotechnol 3:294–9.
   PubMedGoogle Scholar
• Fournier V, Hagler J, Daane K, de Leon J, Groves R. (2008). Identifying the predator complex of Homalodisca vitripennis (Hemiptera: Cicadellidae): A comparative study of the efficacy of an ELISA and PCR gut content assay. Oecologia 157:629–40.
   PubMed Web of Science ®Google Scholar
• Franzini PZN, Dippenaar-Schoeman AS, Yessoufou K, Van der Bank FH. (2013). Combined analyses of genetic and morphological data indicate more than one species of Cyrtophora (Araneae: Araneidae) in South Africa. Int J Mod Biol Res 1:21–34.
   Google Scholar
• Funk DJ, Omland KE. (2003). Species-level paraphyly and polyphyly: Frequency, causes, and consequences, with insights from animal mitochondrial DNA. Annu Rev Ecol E S34:397–423.
   Web of Science ®Google Scholar
• Galimberti A, De Mattia F, Losa A, Bruni I, Federici S, Casiraghi M, Martellos S, Labra M. (2013). DNA barcoding as a new tool for food traceability. Food Res Int 50:55–63.
   Web of Science ®Google Scholar
• Garb JE, Gillespie RG. (2006). Island hopping across the central Pacific: Mitochondrial DNA detects sequential colonization of the Austral Islands by crab spiders (Araneae: Thomisidae). J Biogeogr 33:201–20.
   Web of Science ®Google Scholar
• Gariepy TD, Kuhlmann U, Gillott C, Erlandson M. (2007). Parasitoids, predators and PCR: The use of diagnostic molecular markers in biological control of Arthropods. J Appl Entomol 131:225–40.
   Web of Science ®Google Scholar
• Gentekaki E, Lynn DH. (2009). High-level genetic diversity but no population structure inferred from nuclear and mitochondrial markers of the peritrichous ciliate Carchesium polypinum in the Grand River basin (North America). Appl Environ Microbiol 75:3187–95.
   PubMed Web of Science ®Google Scholar
• Germain JF, Chatot C, Meusnier I, Artige E, Rasplus JY, Cruaud A. (2013). Molecular identification of Epitrix potato flea beetles (Coleoptera: Chrysomelidae) in Europe and North America. Bull Entomol Res 103:354–62.
   PubMed Web of Science ®Google Scholar
• Godfray HCJ. (2002). Challenges for taxonomy. Nature 417:17–8.
   PubMed Web of Science ®Google Scholar
• Greenberg B, Kunich JC. (2002). Entomology and the law: Flies as forensic indicators. Cambridge: Cambridge University Press.
   Google Scholar
• Gregory TR. (2005). DNA barcoding does not compete with taxonomy. Nature 434:1067. doi:10.1038/4341067b.
   PubMed Web of Science ®Google Scholar
• Hagino K, Bendif EIM, Young JR, Kogame K, Probert I, et al. (2011). New evidence for morphological and genetic variation in the cosmopolitan coccolithophore Emiliana huxleyi (Prymnesiophyceae) from the cox1b-ATP4 genes. J Phycol 47:1164–76.
   PubMed Web of Science ®Google Scholar
• Hajibabaei M, Singer GAC, Hebert PDN, Hickey DA. (2007). DNA barcoding: How it complements taxonomy, molecular phylogenetics and population genetics. Trends Genet 23:167–72.
   PubMed Web of Science ®Google Scholar
• Hajibabaei M, Janzen DH, Burns JM, Hallwachs W, Hebert PDN. (2006a). DNA barcodes distinguish species of tropical Lepidoptera. Proc Natl Acad Sci USA 103:968–71.
   PubMed Web of Science ®Google Scholar
• Hajibabaei M, Smith MA, Janzen DH, Rodriguez JJ, Whitfield JB, Hebert PDN. (2006b). A minimalist barcode can identify a specimen whose DNA is degraded. Mol Ecol Notes 6:959–64.
   Web of Science ®Google Scholar
• Hajibabaei M, Waard JR, Ivanova NV, Ratsasingham S, Dooh RT, Kirk SL, Mackie PM, Hebert PDN. (2005). Critical factors for assembling a high volume of DNA barcodes. Philos Trans R Soc Lond, B, Biol Sci 360:1959–67.
   PubMed Web of Science ®Google Scholar
• Hamsher SE, Evans KM, Mann DG, Poulickova A, Saunders GW. (2011). Barcoding diatoms: exploring alternatives to COI-5P. Protist 162:405–22.
   PubMed Web of Science ®Google Scholar
• Hausmann A, Haszprunar G, Hebert PDN. (2011). DNA barcoding the geometrid fauna of Bavaria (Lepidoptera): Successes, surprises, and questions. PLoS One. 6:e17134.
   PubMed Web of Science ®Google Scholar
• Hebert PDN, Barrett DHR. (2005). Reply to the comment by L. Prendini on “Identifying spiders through DNA barcodes”. Can J Zool 83:505–6.
   Web of Science ®Google Scholar
• Hebert PDN, Cywinska A, Ball SL, deWaard JR. (2003a). Biological identifications through DNA barcodes. Proc Biol Sci 270:313–21.
   PubMed Web of Science ®Google Scholar
• Hebert PDN, Gregory TR. (2005). The promise of DNA barcoding for taxonomy. Syst Biol 54:852–9.
   PubMed Web of Science ®Google Scholar
• Hebert PDN, Penton EH, Burns JM, Janzen DH, Hallwachs W. (2004a). Ten species in one: DNA barcoding reveals cryptic species in the neotropical skipper butterfly Astraptes fulgerator. Proc Natl Acad Sci USA 101:14812–7.
   PubMed Web of Science ®Google Scholar
• Hebert PDN, Ratnasingham S, deWaard JR. (2003b). Barcoding animal life: Cytochrome c oxidase subunit 1 divergences among closely related species. Proc R Soc Lond B Biol Sci 270:S96–9.
   PubMed Web of Science ®Google Scholar
• Hebert PDN, Stoeckle MY, Zemlak TS, Francis CM. (2004b). Identification of birds through DNA barcodes. PLoS Bio l2:1657–63.
   Google Scholar
• Hendrich L, Moriniere J, Haszprunar G, Hebert PDN, Hausmann A, Kohler F, Balke M. (2015). A comprehensive DNA barcode database for Central European beetles with a focus on Germany: Adding more than 3500 identified species to BOLD. Mol Ecol Resour 15:795–818.
   PubMed Web of Science ®Google Scholar
• Hernández-Triana LM, Crainey JL, Hall A, Fatih F, Mackenzie-Dodds J, Shelley AJ, Zhou X, et al. (2012). DNA barcodes reveal cryptic genetic diversity within the blackfly subgenus Trichodagmia Enderlein (Diptera: Simuliidae: Simulium) and related taxa in the New World. Zootaxa 3514:43–69.
   Google Scholar
• Hickerson MJ, Meyer CP, Moritz C. (2006). DNA barcoding will often fail to discover new animal species over broad parameter space. Syst Biol 55:729–39.
   PubMed Web of Science ®Google Scholar
• Hlaing T, Tun-Lin W, Somboon P, Socheat D, Setha T, Min S, Chang MS, Walton C. (2009). Mitochondrial pseudogenes in the nuclear genome of Aedes aegypti mosquitoes: Implications for past and future population genetic studies. BMC Genet 10:11.
   PubMed Web of Science ®Google Scholar
• Hogg ID, Hebert PDN. (2004). Biological identification of springtails (Hexapoda: Collembola) from the Canadian Arctic, using mitochondrial DNA barcodes. Can J Zool 82:749–54.
   Web of Science ®Google Scholar
• Hollingsworth PM. (2007). DNA barcoding: Potential users. Genomics Soc Policy 3:44–7.
   Google Scholar
• Hubert N, Hanner R, Holm E, Mandrak NE, Taylor E, Burridge M, Watkinson D, et al. (2008). Identifying Canadian freshwater fishes through DNA barcodes. PLoS One 3:e2490.
   PubMed Web of Science ®Google Scholar
• International Barcode of Life. (2010). International Barcode of Life. Available at:http://ibol.org/ (Accessed 15 October 2010).
   Google Scholar
• Janzen DH, Hajibabaei M, Burns JM, Hallwachs W, Remigio E, Hebert PDN. (2005). Wedding biodiversity inventory of a large and complex Lepidoptera fauna with DNA barcoding. Philos Trans R Soc Lond, B, Biol Sci 360:1835–45.
   PubMed Web of Science ®Google Scholar
• Jeong TJ, Jun J, Han S, Kim HT, OH K, Kwak M. (2012). DNA barcode reference data for the Korean herpetofauna and their applications. Mol Ecol Resour 13:1019–32.
   Web of Science ®Google Scholar
• Johnsen A, Rindal E, Ericson PGP, Zuccon D, Kerr KCR, Stoeckle MY, Lifjeld JT. (2010). DNA barcoding of Scandinavian birds reveals divergent lineages in trans-Atlantic species. J Ornithol 151:565–78.
   Web of Science ®Google Scholar
• Jordaens K, Sonet G, Richet R, Dupont E, Braet Y, Desmyter S. (2013). Identification of forensically important Sarcophaga species (Diptera: Sarcophagidae) using the mitochondrial COI gene. Int J Legal Med 127:491–504.
   PubMed Web of Science ®Google Scholar
• Jordal BH, Kambestad M. (2014). DNA barcoding of bark and ambrosia beetles reveals excessive NUMTs and consistent east-west divergence across Palearctic forests. Mol Ecol Resour 14:7–17.
   PubMed Web of Science ®Google Scholar
• Joseph I, Mathew DG, Sathyan P, Vargheese G. (2011). The use of insects in forensic investigations: An overview on the scope of forensic entomology. J Forensic Dent Sci 3:89–91.
   PubMedGoogle Scholar
• Kaila L, Stahls G. (2006). DNA barcodes: Evaluating the potential of COI to diffentiate closely related species of Elachista (Lepidoptera: Gelechioidea: Elachistidae) from Australia. Zootaxa 1170:1–26.
   Google Scholar
• Kappner I, Bieler R. (2006). Phylogeny of venus clams (Bivalvia: Venerinae) as inferred from nuclear and mitochondrial gene sequences. Mol Phylogenet Evol 40:317–31.
   PubMed Web of Science ®Google Scholar
• Kerr KCR, Stoeckle MY, Dove CJ, Weigt LA, Francis CM, Hebert PDN. (2007). Comprehensive DNA barcode coverage of North American birds. Mol Ecol Notes 7:535–43.
   PubMed Web of Science ®Google Scholar
• Kerr KCR, Birks SM, Kalyakin MV, Red’kin YA, Koblik EA, Hebert PD. (2009). Filling the gap - COI barcode resolution in eastern Palearctic birds. Frontiers Zool 6:29. doi:10.1186/1742-9994-6-29
   PubMed Web of Science ®Google Scholar
• Khedkar GD, Abhayankar SB, Nalage D, Ahmed SN, Khedkar CD. (2014). Short Communication: DNA barcode based wildlife forensics for resolving the origin of claw samples using a novel primer cocktail. Mitochondrial DNA. [Epub ahead of print]. doi:10.3109/19401736.2014.987270.
   Web of Science ®Google Scholar
• King RA, Vaughan IP, Bell JR, Bohan DA, Symondson WOC. (2010). Prey choice by carabid beetles feeding on an earthworm community analysed using species and lineagespecific PCR primers. Mol Ecol 19:1721–32.
   PubMed Web of Science ®Google Scholar
• Knowlton N, Weigt LA. (1998). New dates and new rates for divergence across the Isthmus of Panama. Proc R Soc Lond B 265:2257–63
   Web of Science ®Google Scholar
• Kondo T, Gullan PJ, Williams DJ. (2008). Coccidolog. The study of scale insects (Hemiptera: Sternorrhyncha: Coccoidea). Revista Corpoica – Ciencia Y Tecnología Agropecuaria 9:55–61.
   Google Scholar
• Kosakyan A, Heger TJ, Leander BS, Todorov M, Mitchell EA, et al. (2012). COI barcoding of nebelid testate amoebae (Amoebozoa: Arcellinida): Extensive cryptic diversity and redefinition of the Hyalospheniidae Schultze. Protist. 163:415–34.
   PubMed Web of Science ®Google Scholar
• Kress JW, Erickson DL. (2008). DNA barcodes: Genes, genomics, and bioinformatics. Proc Natl Acad Sci USA 105:2761–2.
   PubMed Web of Science ®Google Scholar
• Kress WJ, Wurdack KJ, Zimmer EA, Weigt LA, Janzen DH. (2005). Use of DNA barcodes to identify flowering plants. Proc Natl Acad Sci USA 102:8369–74.
   PubMed Web of Science ®Google Scholar
• Kruger A, Obermayr U, Czajka C, Bueno-Mari R, Jost A, Rose A. (2014). COI sequencing for invasive mosquito surveillance in Germany reveals genetically divergent specimens near Aedes geniculatus (Diptera: Culicidae). J Eur Mosq Control Assoc 32:22–6.
   Google Scholar
• Kucera E, Saunders GW. (2008). Assigning morphological variants of Fucus (Fucales, Phaeophyccae) in Canadian waters to recognized species using DNA barcoding. Botany 86:1065–79.
   Web of Science ®Google Scholar
• Kumar NP, Krishnamoorthy N, Sahu SS, Rajavel AR, Sabesan S, Jambulingam P. (2013). DNA Barcodes indicate members of the Anopheles fluviatilis (Diptera: Culicidae) species complex to be conspecific in India. Mol Ecol Resour 13:354–61.
   PubMed Web of Science ®Google Scholar
• Kumar NP, Rajavel AR, Nataraja R, Jambulingam P. (2007). DNA barcodes can distinguish species of Indian mosquitoes (Diptera: Culicidae). J Med Entomo l44:1–7.
   Google Scholar
• Kumar NP, Srinivasan R, Jambulingam P. (2012). DNA barcoding for identification of sand flies (Diptera: Psychodidae) in India. Mol Ecol Resour 12:414–20.
   PubMed Web of Science ®Google Scholar
• La salle J, Wheeler Q, Jackway P, Winterton S, Hobern D, Lovell D. (2009). Accelerating taxonomic discovery through automated character extraction. Zootaxa 2217:43–55.
   Web of Science ®Google Scholar
• Landi M, Dimech M, Arculeo M, Biondo G, Martins R, et al. (2014). DNA barcoding for species assignment: The case of Mediterranean marine fishes. PLoS One 9:e106135.
   PubMed Web of Science ®Google Scholar
• Langhoff P, Authier A, Buckley TR, Dugdale JS, Rodrigo A, Newcomb RD. (2009). DNA barcoding of the endemic New Zealand leafroller moth genera, Ctenopseustis and Planotortrix. Mol Ecol Resour 9:691–8.
   PubMed Web of Science ®Google Scholar
• Lara A, de Leon JLP, Rodriguez R, Casane D, Cote G, Bernatchez L, Garcia-Macahdo E. (2010). DNA barcoding of Cuban freshwater fishes: Evidence for cryptic species and taxonomic conflicts. Mol Ecol Resour 10:421–30.
   PubMed Web of Science ®Google Scholar
• Layton K. (2012). Examining patterns of genetic variation in Canadian marine molluscs through DNA barcodes. [M.Sc thesis]. Canada: Department of Integrative Biology, The University of Guelph, Guelph, Ontario.
   Google Scholar
• Le Gall L, Saunders GW. (2010). DNA barcoding is a powerful tool to uncover algal diversity: A case study of the Phyllophoraceae (Gigartinales, Rhodophyta) in the Canadian flora. J Phycol 46:374–89.
   Web of Science ®Google Scholar
• Lee MSY. (2002). Online database could end taxonomic anarchy. Nature 417:787–8.
   PubMed Web of Science ®Google Scholar
• Li J, Han H, Gao Q, Jin Q, Chi M, WU C, Zhang A. (2012). Species identification of Noctuidae (Insecta: Lepidopera) with DNA barcoding of support vector machine and neighbor-joining method. J Biosafety 21:308–14.
   Google Scholar
• Lim BK. (2012). Preliminary assessment of Neotropical mammal DNA barcodes: An underestimation of biodiversity. Open Zool J 5:10–7.
   Google Scholar
• Lipscomb D, Platnick N, Wheeler Q. (2003). The intellectual content of taxonomy: A comment on DNA taxonomy. Trends Ecol E 18:65–6.
   Web of Science ®Google Scholar
• Liu D, Ma J. (2011). The information systems for DNA barcode data. In: Yang N-S. editor. Systems and computational biology – bioinformatics and computational modeling. Shanghai: In Tech. p 139–60.
   Google Scholar
• Liu H, Probert I, Uitz J, Claustre H, Aris-Brosou S, et al. (2009). Extreme diversity in noncalcifying haptophytes explains a major pigment paradox in open oceans. Proc Natl Acad Sci USA. 106:12803–8.
   PubMed Web of Science ®Google Scholar
• Liu Z, Zeng X, Yang D, Chu G, Yuan Z, Chen S. (2012). Applying DNA barcodes for identification of plant species in the family Araliaceae. Genes 499:76–80.
   Google Scholar
• Lukhtanov VA, Sourakov A, Zakharov EV, Hebert PDN. (2009). DNA barcoding Central Asian butterflies: increasing geographical dimension does not significantly reduce the success of species identification. Mol Ecol Resour 9:1302–10.
   PubMed Web of Science ®Google Scholar
• Luo A, Zhang A, Ho SYW, Xu W, Zhang Y, Shi W, Cameron SL, Zhu C. (2011). Potential efficacy of mitochondrial genes for animal DNA barcoding: A case study using eutherian mammals. BMC Genomics 12:84
   PubMed Web of Science ®Google Scholar
• Mabragana E, Astarloa JMD, Hanner R, Zhang J, Castro MG. (2011). DNA barcoding identifies Argentine fishes from marine and brackish waters. PLoS One 6:e28655.
   PubMed Web of Science ®Google Scholar
• MacGillivary ML, Kaczmarska I. (2011). Survey of the efficacy of a short fragment of the rbcL gene as a supplemental DNA barcode for diatoms. J Eukaryot Microbiol 58:529–36.
   PubMed Web of Science ®Google Scholar
• Maddison DR, Guralnick R, Hill A, Reysenbach A-L, McDade LA. (2012). Ramping up biodiversity discovery via online quantum contributions. Trends Ecol Evol (Amst) 27:72–7.
   PubMed Web of Science ®Google Scholar
• Mallet J, Willmott K. (2003). Taxonomy: Renaissance or tower of babel? Trends Ecol E 18:57–9.
   Web of Science ®Google Scholar
• Maloney D, Drummond FA, Alford R. (2003). Spider predation in agroecosystems: Can spiders effectively control pest populations? Maine Agric Forest Exp Stat Tech Bull 190:32.
   Google Scholar
• Mann DG, Sato S, Trobajo R, Vanormelingen P, Souffreau C. (2010). DNA barcoding for species identification and discovery in diatoms. Cryptogamie Algo l31:557–77.
   Google Scholar
• Maralit BA, Aguila RD, Ventolero MFH, Perez SKL, Willette DA, Mudjekeewis D, Santos MD. (2013). Detection of mislabeled commercial fishery by-products in the Philippines using DNA barcodes and its implications to food traceability and safety. Food Control 33:119e125.
   Web of Science ®Google Scholar
• Marie-Stephane T, Mireille O, Serge K. (2012). An integrative morphological and moleculardiagnostics for Typhlodromus pyri (Acari: Phytoseiidae). Zoologica Scripta 41:68–78.
   Web of Science ®Google Scholar
• Matheson CD, Muller GC, Junnila A, Vernond K, Hausmanne A, Millere MA, Greenblattb C, Schleinb Y. (2007). A PCR method for detection of plant meals from the guts of insects. Org Divers E 7:294–303.
   Web of Science ®Google Scholar
• McDevit DC, Saunders GW. (2009). On the utility of DNA barcoding for species differentiation among brown macroalgae (Phaeophyceae) including a novel extraction protocol. Phycological Res 57:131–41.
   Web of Science ®Google Scholar
• Meier R, Shiyang K, Vaidya G, Ng PKL. (2006). DNA Barcoding and taxonomy in Diptera: A tale of high intraspecific variability and low identification success. Syst Biol 55:715–28.
   PubMed Web of Science ®Google Scholar
• Meiklejohn KA, James JF, Dowton M. (2013). DNA Barcoding identifies all immature life stages of a forensically important flesh fly (Diptera: Sarcophagidae). J Forensic Sci 58:184–7.
   PubMed Web of Science ®Google Scholar
• Meusnier I, Singer GAC, Landry JF, Hickey DA, Hebert PDN, Hajibabaei M. (2008). A universal DNA mini-barcode for biodiversity analysis. BMC Genomics 9:214. doi:10.1186/1471-2164-9-214.
   PubMed Web of Science ®Google Scholar
• Meyer CP, Paulay G. (2005). DNA barcoding: Error rates based on comprehensive sampling. PLoS Biol 3:e422. doi:10.1371/journal.pbio.0030422.
   PubMed Web of Science ®Google Scholar
• Milner-Gulland EJ, Bennett EL, The SCB 2002 Annual Meeting Wild Meat Group. (2003). Wild meat: The bigger picture. Trends Ecol E 18:351–7.
   Web of Science ®Google Scholar
• Mitchell A, Samways MJ. (2005). DNA evidence that the morphological ‘forms’ of Palpopleura lucia (Drury) are separate species (Odonata: Libellulidae). Odonatologica 34:173–8.
   Web of Science ®Google Scholar
• Monaghan MT, Balke M, Gregory TR, Vogler A. (2005). DNA-based species delineation in tropical beetles using mitochondrial and nuclear markers. Philos Trans R Soc Lond, B, Biol Sci 360:1925–33.
   PubMed Web of Science ®Google Scholar
• Moniz MB, Kaczmarska I. (2010). Barcoding of diatoms: Nuclear encoded ITS revisited. Protist 161:7–34.
   PubMed Web of Science ®Google Scholar
• Monzo C, Molla O, Castanera P, Urbaneja A. (2009). Activity-density of Pardosa cribata in Spanish citrus orchards and its predatory capacity on Ceratitis capitata and Myzus persicae. BioControl 54:393–402.
   Web of Science ®Google Scholar
• Monzo C, Sabater-Munoz B, Urbaneja A, Castanera P. (2010). Tracking medfly predation by the wolf spider, Pardosa cribata Simon, in citrus orchards using PCR-based gut-content analysis. Bull Entomol Res 100:145–52.
   PubMed Web of Science ®Google Scholar
• Moritz C, Cicero C. (2004). DNA barcoding: Promise and pitfalls. PLoS Biol l2:1529–31.
   Google Scholar
• Moses MJ. (1961). Spermiogenesis in the crayfish (Procambarus clarkii) II. Description of stages. J Biophys Biochem Cytol 10:301–33.
   PubMedGoogle Scholar
• Mower JP, Touzet P, Gummow JS, Delph LF, Palmer JD (2007). Extensive variation in synonymous substitution rates in mitochondrial genes of seed plants. BMC Evol Biol 7:135. doi:10.1186/1471-2148-7-135.
   PubMed Web of Science ®Google Scholar
• Murphy RW, Crawford AJ, Bauer AM, Che J, Donnellan SC, Fritz U, Haddad CFB, et al. (2012). Cold code: The global initiative to DNA barcode amphibians and nonavian reptiles. Mol Ecol Resour 13:161–7
   Web of Science ®Google Scholar
• Naddaf SR, Oshaghi MA, Vatandoost H. (2012). Confirmation of two sibling species among Anopheles fluviatilis mosquitoes in South and Southeastern Iran by analysis of cytochrome oxidase I gene. J Arthropod-Borne Dis 6:144–50.
   PubMed Web of Science ®Google Scholar
• Nagoshi RN, Meagher RL, Brambila J. (2011). Use of DNA barcodes to identify invasive armyworm Spodoptera species in Florida. J Insect Sci 11:154. doi: 10.1673/031.011.15401.
   PubMed Web of Science ®Google Scholar
• Nassonova E, Smirnov A, Fahrni J, Pawlowski J. (2010). Barcoding Amoebae: Comparison of SSU, ITS and COI genes as tools for molecular identification of naked lobose Amoebae. Protist 161:102–15.
   PubMed Web of Science ®Google Scholar
• Nejstgaard JC, Frischer ME, Simonelli P, Troedsson C, Brakel M, Adiyaman F, Sazhin AF, Artigas LF. (2007). Towards quantitative in situ estimates of zooplankton feeding: II. Use of qPCR to estimate feeding on specific prey by copepods. Molecular approaches to study trophic interactions: Current progress and future directions: Abstracts of MTI-symposium; 2007 Mar 1–3; Austria: Institute of Ecology Innsbruck University
   Google Scholar
• Neumann G, Follett PA, Hollingsworth RG, de Leon JH. (2010). High host specificity in Encarsia diaspidicola (Hymenoptera: Aphelinidae), a biological control candidate against the white peach scale in Hawaii. BioControl 54:107–13.
   Web of Science ®Google Scholar
• Newmaster SG, Grguric M, Shanmughanandhan D, Ramalingam S, Ragupathy S. (2013). DNA barcoding detects contamination and substitution in North American herbal products. BMC Med 11:222. doi: 10.1186/1741-7015-11-222.
   PubMed Web of Science ®Google Scholar
• Nicolas V, Schaeffer B, Missoup AD, Kennis J, Colyn M, Denys C, Tatard C, et al. (2012). Assessment of three mitochondrial genes (16S, Cytb, CO1) for identifying species in the Praomyini tribe (Rodentia: Muridae). PLoS One. 7:e36586. doi:10.1371/journal.pone.0036586.
   PubMed Web of Science ®Google Scholar
• Nieukerken EJV, Doorenweerd C, Stokvis FR, Dick SJ, Groenenberg DSJ. (2012). DNA barcoding of the leaf-mining moth subgenus Ectoedemias. str. (Lepidoptera: Nepticulidae) with COI and EF1-α: Two are better than one in recognizing cryptic species. Contr Zool 81:1–24.
   Google Scholar
• Nijman V, Aliabadian M. (2010). Performance of distance-based DNA barcoding in the molecular identification of Primates. C R Biol. 333:11–6.
   PubMed Web of Science ®Google Scholar
• Nilsson RH, Ryberg M, Kristiansson E, Abarenkov K, Larsson KH, Koljalg U. (2006). Taxonomic reliability of DNA sequences in public sequence databases: A fungal perspective. PLoS One. 1:e59. doi:10.1371/journal.pone.0000059.
   PubMed Web of Science ®Google Scholar
• Nougoue AR. (2012). DNA barcoding as a tool for the identification of illegally traded wildlife products [M.Sc. thesis]. Quebec, Canada: Department of Biology, University of Concordia, Montreal.
   Google Scholar
• Ogedengbe JD, Hanner RH, Barta JR. (2011). DNA barcoding identifies Eimeria species and contributes to the phylogenetics of coccidian parasites (Eimeriorina, Apicomplexa, Alveolata). Int J Parasitol 41:843–50.
   PubMed Web of Science ®Google Scholar
• Page RDM. (2011). Dark taxa: GenBank in a post-taxonomic world. Available at: http://iphylo.blogspot.co.uk/2011/04/dark-taxa-genbank-in-post-taxonomic.html.
   Google Scholar
• Palmer JD, Adams KL, Cho Y, Parkinson CL, Qiu YL, Song K. (2000). Dynamic evolution of plant mitochondrial genomes: mobile genes and introns and highly variable mutation rates. Proc Natl Acad Sci USA 97:6960–6.
   PubMed Web of Science ®Google Scholar
• Panday R, Jha DK, Thapa N, Pokharel BR, Aryal NK. (2014). Forensic wildlife parts and their product identification and individualization using DNA barcoding. Open Forensic Sci J 7:6–13.
   Google Scholar
• Parr CS, Guralnick R, Cellinese N, Page RDM. (2012). Evolutionary informatics: Unifying knowledge about the diversity of life. Trends Ecol Evol (Amst) 27:94–103.
   PubMed Web of Science ®Google Scholar
• Pereira LHG, Hanner R, Foresti F, Oliveira C. (2013). Can DNA barcoding accurately discriminate megadiverse Neotropical freshwater fish fauna? BMC Genet 14:20.
   PubMed Web of Science ®Google Scholar
• Pereira LHG, Maia GMG, Hanner R, Foresti F, Oliveira C. (2011). DNA barcodes discriminate freshwater fishes from the Paraiba do Sul River Basin, Sao Paulo, Brazil. Mitochondrial DNA 22:71–9.
   PubMed Web of Science ®Google Scholar
• Pereira LHG, Pazian MF, Hanner R, Foresti F, Oliveira C. (2011). DNA barcoding reveals hidden diversity in the Neotropical freshwater fish Piabina argentea (Characiformes: Characidae) from the Upper Parana Basin of Brazil. Mitochondrial DNA. 22:87–96.
   PubMed Web of Science ®Google Scholar
• Pfenninger M, Nowak C, Kley C, Steinke D, Streit B. (2007). Utility of DNA taxonomy and barcoding for the inference of larval community structure in morphologically cryptic Chironomus (Diptera) species. Mol Ecol 16:1957–68.
   PubMed Web of Science ®Google Scholar
• Pfunder M, Holzgang O, Frey J. (2004). Development of microarray-based diagnostics of voles and shrews for use in biodiversity monitoring studies, and evaluation of mitochondrial cytochrome oxidase I vs. cytochrome b as genetic markers. Mol Ecol 13:1277–86.
   PubMed Web of Science ®Google Scholar
• Prendini L. (2005). Comment on identifying spiders through DNA barcodes. Can J Zoo l83:481–91.
   Google Scholar
• Prieto-Benitez S, Mendez M. (2011). Effects of land management on the abundance and richness of spiders (Araneae): A meta-analysis. Biol Conserv 144:683–91
   Web of Science ®Google Scholar
• Randi E. (2000). Mitochondrial DNA. In: Baker AJ, editor. Molecular methods in ecology. Malden: Blackwell Science.
   Google Scholar
• Ratnasingham S, Hebert PDN. (2007). BOLD: The barcode of life data system. Mol Ecol Notes 7:355–64.
   PubMed Web of Science ®Google Scholar
• Ratnasingham S, Hebert PDN. (2013). A DNA-based registry for all animal species: The barcode index number (BIN) system. PLoS One 8:e66213. doi:10.1371/journal.pone.0066213.
   PubMed Web of Science ®Google Scholar
• Rebijith KB, Asokan R, Kumar NKK, Krishna V, Chaitanya BN, Ramamurthy VV. (2013). DNA barcoding and elucidation of cryptic aphid species (Hemiptera: Aphididae) in India. Bull Entomol Res 3:601–10.
   Web of Science ®Google Scholar
• Redford KH. (1992). The empty forest. Bioscience 42:412–22.
   Web of Science ®Google Scholar
• Renaud AK Savage J., Adamowicz SJ (2012). DNA barcoding of Northern Nearctic Muscidae (Diptera) reveals high correspondence between morphological and molecular species limits. BMC Ecol 12:24. doi:10.1186/1472-6785-12-24.
   PubMed Web of Science ®Google Scholar
• Rieseberg LH, Wood TE, Baack EJ. (2006). The nature of plant species. Nature 440:524–7.
   PubMed Web of Science ®Google Scholar
• Robideau GP, De Cock AW, Coffey MD, Voglmayr H, Brouwer H, et al. (2011). DNA barcoding of oomycetes with cytochrome c oxidase subunit I and internal transcribed spacer. Mol Ecol Resour 11:1002–11.
   PubMed Web of Science ®Google Scholar
• Robinson EA, Blagoev GA, Hebert PDN, Adamowicz SJ. (2009). Prospects for using DNA barcoding to identify spiders in species-rich genera. ZooKeys 16:27–46.
   Web of Science ®Google Scholar
• Rohrich CR, Ngwa CJ, Wiesner J, et al. (2012). Harmonine, a defence compound from the harlequin ladybird, inhibits mycobacterial growth and demonstrates multi-stage antimalarial activity. Biol Lett 8:308–11.
   PubMed Web of Science ®Google Scholar
• Rolo EA, Oliveira AR, Dourado CG, Farinha A, Rebelo MT, Dias DL. (2013). Identification of sarcosaprophagous Diptera species through DNA barcoding in wildlife forensics. Forensic Sci Int 228:160–4.
   PubMed Web of Science ®Google Scholar
• Rubinoff D, Cameron S, Will K. (2006). A genomic perspective on the shortcomings of mitochondrial DNA for “barcoding” identification. JHered 97:581–94.
   Web of Science ®Google Scholar
• Rubinoff D. (2006). Utility of mitochondrial DNA barcodes in species conservation. Conserv Biol 20:1026–33.
   PubMed Web of Science ®Google Scholar
• Rusch DB, Halpern AL, Sutton G, Heidelberg KB, Williamson S, Yooseph S, Wu D, et al. (2007). The Sorcerer II Global Ocean Sampling expedition: Northwest Atlantic through eastern tropical Pacific. PLoS Biol 5:e77. doi:10.1371/journal.pbio.0050077.
   PubMed Web of Science ®Google Scholar
• Saunders GW. (2008). A DNA barcode examination of the red algal family Dumontiaceae in Canadian waters reveals substantial cryptic species diversity. 1. The foliose Dilsea-Neodilsea complex and Weeksia. Botany 86:773–89.
   Web of Science ®Google Scholar
• Sbordoni V. (2010). Strength and limitations of DNA barcode under the multidimensional species perspective. In: Nimis PL, Vignes Lebbe R, editors. Tools for identifying biodiversity: Progress and problems. Italy: EUT. p 271–6
   Google Scholar
• Schindel DE, Miller SE. (2010). Provisional nomenclature: The on-ramp to taxonomicnames. In: Polaszek A, editor. Systema naturae 250 – the Linnaean ark. Boca Raton: CRC Press. p 109–15.
   Google Scholar
• Schmidt MH, Roschewitz I, Thies C, Tscharntke T. (2005). Differential effects of landscape and management on diversity and density of ground-dwelling farmland spiders. J Appl Ecol 42:281–7.
   Web of Science ®Google Scholar
• Schoch CL, Seifert KA, Huhndorf S, Robert V, Spouge JL, et al. (2012). Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for fungi. Proc Natl Acad Sci USA 109:6241–6.
   PubMed Web of Science ®Google Scholar
• Scotland RW, Hughes C, Bailey D, Wortley A. (2003a). The big machine and the much-maligned taxonomist. Syst Biodiv 1:139–43.
   Google Scholar
• Seberg O, Humphries CJ, Knapp S, Stevenson DW, Petersen G, Scharff N, Andersen NM. (2003). Shortcuts in systematic? A commentary on DNA-based taxonomy. Trends Ecol E 18:63–5.
   Web of Science ®Google Scholar
• Seifert KA, Samson RA, Dewaard JR, Houbraken J, Levesque CA, Moncalvo JM, Louis-Seize G, Hebert PDN. (2007). Prospects for fungus identification using CO1 DNA barcodes, with Penicillium as a test case. Proc Natl Acad Sci USA 104:3901–6.
   PubMed Web of Science ®Google Scholar
• Seifert KA. (2009). Progress towards DNA barcoding of fungi. Mol Ecol Resour 9:83–9.
   PubMed Web of Science ®Google Scholar
• Sharma S. (2014). A study on spiders as predators in the agro ecosystems. Mun Ent Zool 9:80–3.
   Google Scholar
• Shen YY, Chen X, Murphy RW. (2013). Assessing DNA barcoding as a tool for species identification and data quality control. PLoS One 8:e57125.
   PubMed Web of Science ®Google Scholar
• Sheppard SK, Harwood JD. (2005). Advances in molecular ecology: Tracking trophic links through predator-prey food-webs. Funct Ecol 19:751–62.
   Web of Science ®Google Scholar
• Sherwood AR, Prestling GG. (2007). Universal primers amplify a 23S rDNA plastid marker in eukaryotic algae and cyanobacteria. J Phycol 43:605–8.
   Web of Science ®Google Scholar
• Siddall ME, Kvist S, Phillips A, Oceguera-Figuero A. (2012). DNA barcoding of parasitic nematodes: Is it kosher? J Parasitol 98:692–4.
   PubMed Web of Science ®Google Scholar
• Simmons RB, Weller SJ. (2001). Utility and evolution of cytochrome b in insects. Mol Phylogenet Evol 20:196–210
   PubMed Web of Science ®Google Scholar
• Silva-Brandao KL, Lyra ML, Freitas AVL. (2009). BarcodingLepidoptera: Current situation and perspectives on theusefulness of a contentious technique. Neotrop Entomol 38:441–51
   PubMed Web of Science ®Google Scholar
• Skerratt LF, Campbell NJH, Murrell A, Walton S, Kemp D, Barker SC. (2002). The mitochondrial 12S gene is a suitable marker of populations of Sarcoptes scabiei from wombats, dogs and humans in Australia. Parasitol Res 88:376–9.
   PubMed Web of Science ®Google Scholar
• Smith MA, Fernandez-Triana JL, Eveleigh E, Gomez J, Guclu C, Hallwachs W, Hebert PDN, et al. (2013). DNA barcoding and the taxonomy of Microgastrinae wasps (Hymenoptera, Braconidae): Impacts after 8 years and nearly 20000 sequences. Mol Ecol Res 13:168–76.
   PubMed Web of Science ®Google Scholar
• Smith MA, Wood DM, Janzen DH, Hallwachs W, Hebert PDN. (2007). DNA barcodes affirm that 16 species of apparently generalist tropical parasitoid flies (Diptera, Tachinidae) are not all generalists. Proc Natl Acad Sci USA 104:4967–72.
   PubMed Web of Science ®Google Scholar
• Smith MA, Woodley NE, Janzen DH, Hallwachs W, Hebert PDN. (2006). DNA barcodes reveal cryptic host-specificity within the presumed polyphagous members of a genus of parasitoid flies (Diptera: Tachinidae). Proc Natl Acad Sci USA 103:3657–62.
   PubMed Web of Science ®Google Scholar
• Souza ASB, Kirst FD, Kruger RF. (2008). Insects of forensic importance from Rio Grande do Sul state in southern Brazil. Rev Bras Entomol 52:641–6.
   Web of Science ®Google Scholar
• Sperling F. (2003). DNA barcoding: Deus ex machina. Newsl Biol Surv Can 22:50–3.
   Google Scholar
• Stahlhut JK, Fernandez-Triana J, Adamowicz SJ, Buck M, Goulet H, Hebert PDN Huber JT, et al. (2013). DNA barcoding reveals diversity of Hymenoptera and the dominance of parasitoids in a sub-arctic environment. BMC Ecol 13:2. doi:10.1186/1472-6785-13-2.
   PubMed Web of Science ®Google Scholar
• Steinke D, Vences M, Salzburger W, Meyer A. (2005). TaxI: A software tool for DNA barcoding using distance methods. Philos Trans R Soc Lond, B, Biol Sci 360:1975–80.
   PubMed Web of Science ®Google Scholar
• Stern RF, Andersen RA, Jameson I, Kupper FC, Coffroth MA, et al. (2012). Evaluating the ribosomal internal transcribed spacer (ITS) as a candidate dinoflagellate barcode marker. PLoS One 7:e42780.
   PubMed Web of Science ®Google Scholar
• Stern RF, Horak A, Andrew RL, Coffroth MA, Andersen RA, et al. (2010). Environmental barcoding reveals massive dinoflagellate diversity in marine environments. PLoS One 5:e13991.
   PubMed Web of Science ®Google Scholar
• Stoeckle M. (2003). Taxonomy, DNA, and the bar code of life. Bioscience 53:2–3.
   Web of Science ®Google Scholar
• Stoeckle MY, Hebert PDN. (2004). Response to commentary by Moritz and Cicero on Hebert PDN, Stoeckle MY, Zemlak TS, Francis CM 2004 indentification of birds through DNA barcodes. PLoS Biol 2:e312 Available at: http://www.barcodinglife.org/static/pdf/Response_to_Moritz_an d_Cicero_2004.pdf (Accessed 28 December 2004).
   PubMed Web of Science ®Google Scholar
• Stoeckle MY, Hebert PDN. (2008). Barcode of life. Sci Am 299:82–88.
   PubMed Web of Science ®Google Scholar
• Sun XQ, Zhu YJ, Guo JL, Peng B, Bai MM, Hang YY. (2012). DNA barcoding the Dioscorea in China, a vital group in the evolution of Monocotyledon: Use of matK gene for species discrimination. PLoS One 7:e32057.
   PubMed Web of Science ®Google Scholar
• Sutovsky P, Moreno RD, Ramalho-Santos J, Dominko T, Simerly C, Schatten G. (1999). Ubiquitin tag for sperm mitochondria. Nature 402:371–2.
   PubMed Web of Science ®Google Scholar
• Symondson WOC. (2002). Molecular identification of prey in predator diets. Mol Ecol 11:627–41.
   PubMed Web of Science ®Google Scholar
• Tautz D, Arctander P, Minelli A, Thomas RH, Vogler AP. (2003). A plea for DNA taxonomy. Trends Ecol E 18:70–4.
   Web of Science ®Google Scholar
• Taylor HR, Harris WE. (2012). An emergent science on the brink of irrelevance: A review of the past 8 years of DNA barcoding. Mol Ecol Resour 12:377–88.
   PubMed Web of Science ®Google Scholar
• Tokuda M, Yukawa J, Imura T, Abe Y, Harris KM. (2009). Occurrence of a Dasineura species (Diptera: Cecidomyiidae) that induces leaf-fold galls on cultivated roses in Japan. Jap. J Appl Entomol Zool 53:185–8.
   Web of Science ®Google Scholar
• Townzen JS, Brower AVZ, Judd DD. (2008). Identification of mosquito bloodmeals using mitochondrial cytochrome oxidase subunit I and cytochrome b gene sequences. Med Vet Entomol 22:386–93.
   PubMed Web of Science ®Google Scholar
• Trobajo R, Mann DG, Clavero E, Evans KM, Vanormelingen P, et al. (2010). The use of partial cox1, rbcL and LSU rDNA sequences for phylogenetics and species identification within the Nitzschia palea complex (Bacillariophyceae). 45:413–25.
   Google Scholar
• Urbaneja A, Garcia-Mari F, Tortosa D, Navarro C, Vanaclocha P, Vargues L, Castanera P. (2006). Influence of ground predators on the survival of the Mediterranean fruit fly pupae, Ceratitis capitata, in Spanish citrus orchards. BioControl 51:611–26.
   Web of Science ®Google Scholar
• Vaglia T, Haxaire J, Kitching IJ, Meusnier I, Rougerie R. (2008). Morphology and DNA barcoding reveal three cryptic species within the Xylophanes neoptolemus and loelia species-groups (Lepidoptera: Sphingidae). Zootaxa 1923:18–36.
   Google Scholar
• Valdez-Moreno M, Ivanova NV, Elias-Gutierrez M, Contera-Balderas S, Hebert PDN. (2009). Probing diversity in freshwater fishes from Mexico and Guatemala with DNA barcodes. J Fish Biol 74:377–402.
   PubMed Web of Science ®Google Scholar
• Valentini A, Pompanon F, Taberlet P. (2009). DNA barcoding for ecologists. Trends Ecol Evol (Amst) 24:110–7.
   PubMed Web of Science ®Google Scholar
• Van de Vossenberg BTLH, Westenberg M, Bonants PJM. (2013). DNA barcoding as an identification tool for selected EU-regulated plant pests: An international collaborative test performance study among 14 laboratories. EPPO Bulletin 43:216–28.
   Google Scholar
• Van Velzen R, Bakker FT, Van Loon JJA. (2007). DNA barcoding reveals hidden species diversity in Cymothoe (Nymphalidae). Proc Neth Entomol Soc Meet 18:95–103.
   Google Scholar
• Van Velzen R, Weitschek E, Felici G, Bakker FT. (2012). DNA barcoding of recently diverged species: Relative performance of matching methods. PLoS One 7:e30490.
   PubMed Web of Science ®Google Scholar
• Vences M, Thomas M, Bonett RM, Vieites DR. (2005). Deciphering amphibian diversity through DNA barcoding: Chances and challenges. Philos Trans R Soc Lond, B, Biol Sci 360:1859–68.
   PubMed Web of Science ®Google Scholar
• Vences M, Thomas M, Van der Meijden A, Chiari Y, Vieites DR. (2004). Performance of 16S rRNA in DNA barcoding of amphibians. Integr Comp Bio l44:657–657.
   Google Scholar
• Venter JC, Remington K, Heidelberg JF, Halpern AL, Rusch D, Eisen JA, Wu D, et al. (2004). Environmental genome shotgun sequencing of the Sargasso Sea. Science 304:66–74.
   PubMed Web of Science ®Google Scholar
• Vernon RS, Van Herk WG. (2013). Wireworms as pests of potato. In: Giordanengo P, Vincen C, Alyokhin A, editors. Insect pests of potato: globalperspectives on biology and management. Amsterdam: Elsevier. p 103–64
   Google Scholar
• Vogler AP, Monaghan MT. (2007). Recent advances in DNA taxonomy. J Zool Syst Evol Res 45:1–10.
   Web of Science ®Google Scholar
• Votypka J, Maslov DA, Yurchenko V, Jirku M, Kment P, et al. (2010). Probing into the diversity of trypanosomatid flagellates parasitizing insect hosts in South-West China reveals both endemism and global dispersal. Mol Phylogenet Evol 54:243–53.
   PubMed Web of Science ®Google Scholar
• Wang G, Li C, Guo X, Xing D, Dong Y. (2012). Identifying the main mosquito species in china based on DNA barcoding. PLoS One 7:e47051. doi: 10.1371/journal.pone.0047051.
   PubMed Web of Science ®Google Scholar
• Ward RD, Hanner R, Hebert PDN. (2009). The campaign to DNA barcode all fishes, FISH-BOL. J Fish Biol 74:329–56.
   PubMed Web of Science ®Google Scholar
• Ward RD, Zemlak ST, Innes BH, Last PR, Hebert PDN. (2005). DNA barcoding Australia's fish species. Philos Trans R Soc Lond, B, Biol Sci 360:1847–57.
   PubMed Web of Science ®Google Scholar
• Ward RD. (2009). DNA barcode divergence among species and genera of birds and fishes. Mol Ecol Resour 9:1077–85.
   PubMed Web of Science ®Google Scholar
• Wares JP, Cunningham CW. (2001). Phylogeography and historical ecology of the North Atlantic intertidal. Evolution 12:2455–69
   Google Scholar
• Waugh J. (2007). DNA barcoding in animal species: Progress, potential and pitfalls. BioEssays 29:188–97.
   PubMed Web of Science ®Google Scholar
• Webb JM, Jacobus LM, Funk DH, Zhou X, Kondratieff B, Geraci CJ, DeWalt RE, et al. (2012). A DNA barcode library for North American Ephemeroptera: Progress and prospects. PLoS ONE 7:e38063.
   PubMed Web of Science ®Google Scholar
• Weber DC, Lundgren JG. (2009). Detection of predation using qPCR: Effect of prey quantity, elapsed time, chaser diet, and sample preservation on detectable quantity of prey DNA. J Insect Sci 9:1–12.
   Web of Science ®Google Scholar
• Weigt LA, Baldwin CC, Driskell A, Smith DG, Ormos A. (2012). Using DNA barcoding to assess Caribbean reef fish biodiversity: Expanding taxonomic and geographic coverage. PLoS One 7:e41059.
   PubMed Web of Science ®Google Scholar
• Wheat CW, Watt WB. (2008). A mitochondrial-DNA-based phylogeny for some evolutionary-genetic model species of Colias butterflies (Lepidoptera, Pieridae). Mol Phylogenet Evol 47:893–902.
   PubMed Web of Science ®Google Scholar
• Wheeler QD. (2004). Taxonomic triage and the poverty of phylogeny. Philos Trans R Soc Lond, B, Biol Sci 359:571–83.
   PubMed Web of Science ®Google Scholar
• Wheeler QD. (2007). Invertebrate systematics or spineless taxonomy? Zootaxa 1668:11–8.
   Google Scholar
• White DJ, Wolff JN, Pierson M, Gemmell NJ. (2008). Revealing the hidden complexities of mtDNA inheritance. Mol Ecol 17:4925–42.
   PubMed Web of Science ®Google Scholar
• Whitworth TL, Dawson RD, Magalon H, Baudry E. (2007). DNA barcoding cannot reliably identify species of the blowfly genus Protocalliphora (Diptera: Calliphoridae). Proc Biol Sci 274:1731–9.
   PubMed Web of Science ®Google Scholar
• Wiemers M, Fiedler K. (2007). Does the DNA barcoding gap exist? – A case study in blue butterflies (Lepidoptera: Lycaenidae). Front Zool 4:8. doi:10.1186/1742-9994-4-8.
   PubMed Web of Science ®Google Scholar
• Will KW, Mishler BD, Wheeler QD. (2005). The perils of DNA barcoding and the need for integrative taxonomy. Syst Biol 54:844–51.
   PubMed Web of Science ®Google Scholar
• Will KW, Rubinoff D. (2004). Myth of the molecule: DNA barcodes for species cannot replace morphology for identification and classification. Cladistics 20:47–55.
   PubMed Web of Science ®Google Scholar
• Williams ST, Knowlton N. (2001). Mitochondrial pseudogenes are pervasive and often insidious in the snapping shrimp Genus Alpheus. Mol Biol Evol 18:1484–93.
   PubMed Web of Science ®Google Scholar
• Wilson EO. (2004). Taxonomy as a fundamental discipline. Philos Trans R Soc Lond, B, Biol Sci 359:739. doi:10.1098/rstb.2003.1440.
   PubMed Web of Science ®Google Scholar
• Witt JDS, Threloff DL, Hebert PDN. (2006). DNA barcoding reveals extraordinary cryptic diversity in an amphipod genus: implications for desert spring conservation. Mol Ecol 15:3073–82.
   PubMed Web of Science ®Google Scholar
• Wong EHK, Hanner RH. (2008). DNA barcoding detects market substitution in North American seafood. Food Res Int 41:828–37.
   Web of Science ®Google Scholar
• Woodcock TS, Boyle EE, Roughley RE, Kevan PG, Labbee RN, Smith ABT, Goulet H, et al. (2013). The diversity and biogeography of the Coleoptera of Churchill: Insights from DNA barcoding. BMC Ecol 13:40. doi:10.1186/1472-6785-13-40
   PubMed Web of Science ®Google Scholar
• Yan D, Luo JY, Han YM, Peng C, Dong XP. (2013). Forensic DNA barcoding and bio-response studies of animal horn products used in traditional medicine. PLoS One 8:e55854.
   PubMed Web of Science ®Google Scholar
• Yang Q, Zhao S, Kucerova Z, Stejskal V, Opit G, Qin M, Cao Y, Li F, et al. (2013). Validation of the 16S rDNA and COI DNA barcoding technique for rapid molecular identification of stored product Psocids (Insecta: Psocodea: Liposcelididae). J Econ Entomol 106:419–25.
   PubMed Web of Science ®Google Scholar
• Zhang D-X, Hewitt GM. (1997). Assessment of the universality and utility of a set of conserved mitochondrial primers in insects. Insect Mol Biol 6:143–50
   PubMed Web of Science ®Google Scholar
• Zhang ZQ. (2011). Phylum Arthropoda von Siebold, 1848. In: Animal Biodiversity: An outline of higher-level classification and survey of taxonomic richness (Ed. Zhang Z-Q) Zootaxa 3148:99–103.
   Google Scholar
• Zhou X, Jacobus LM, DeWalt RE, Adamowicz SJ, Hebert PDN. (2010). Ephemeroptera, Plecoptera, and Trichoptera fauna of Churchill (Manitoba, Canada): Insights into biodiversity patterns from DNA barcoding. J N Am Benthol Soc 29:814–37.
   Web of Science ®Google Scholar
• Zurovcova M, Havelka J, Stary P, Vechtova P, Chundelova D, Jarosova A, et al. (2010). ‘DNA barcoding' is of limited value for identifying adelgids (Hemiptera: Adelgidae) but supports traditional morphological taxonomy. Eur J Entomol 107:147–56
   Web of Science ®Google Scholar