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VladimirA. Korshun, KonstantinV. Balakin, TatyanaS. Proskurina, IlyaI. Mikhalev, AndreiD. Malakhov & YuriA. Berlin. (1999) A Pyrene Seco-Pseudonucleoside in Constructing Interaction-Sensitive Fluorescent DNA Probes. Nucleosides and Nucleotides 18:11-12, pages 2661-2676.
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Joy E. Thames, Ludek Eyer & Katherine Seley-Radtke. 2022. Medicinal Chemistry of Tick-Borne Encephalitis. Medicinal Chemistry of Tick-Borne Encephalitis
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Kira Astakhova, Andrey V. Golovin, Igor A. Prokhorenko, Alexey V. Ustinov, Irina A. Stepanova, Timofei S. Zatsepin & Vladimir A. Korshun. (2017) Design of 2′-phenylethynylpyrene excimer forming DNA/RNA probes for homogeneous SNP detection: The attachment manner matters. Tetrahedron 73:23, pages 3220-3230.
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Alexey A. Orlov, Alexey A. Chistov, Liubov I. Kozlovskaya, Alexey V. Ustinov, Vladimir A. Korshun, Galina G. Karganova & Dmitry I. Osolodkin. (2016) Rigid amphipathic nucleosides suppress reproduction of the tick-borne encephalitis virus. MedChemComm 7:3, pages 495-499.
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Ilya O. Aparin, Valentina M. Farzan, Olga A. Veselova, Alexey A. Chistov, Alexander T. Podkolzin, Alexey V. Ustinov, German A. Shipulin, Andrey A. Formanovsky, Vladimir A. Korshun & Timofei S. Zatsepin. (2016) 1-Phenylethynylpyrene (PEPy) as a novel blue-emitting dye for qPCR assay. The Analyst 141:4, pages 1331-1338.
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Morten Borre Hansen, Nicolai Krog Andersen, Michael Raunkjær, Per Trolle Jørgensen & Jesper Wengel. (2014)
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Sharanappa M. Bagale, Adrienne S. Brown, Melissa M. Carballosa Gonzalez, Alberto Vitores, Teresa L. Micotto, N.S. Saleesh Kumar, Ian D. Hentall & James N. Wilson. (2011) Fluorescent reporters of monoamine transporter distribution and function. Bioorganic & Medicinal Chemistry Letters 21:24, pages 7387-7391.
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Irina V. Astakhova, Alexey V. Ustinov, Vladimir A. Korshun & Jesper Wengel. (2011) LNA for Optimization of Fluorescent Oligonucleotide Probes: Improved Spectral Properties and Target Binding. Bioconjugate Chemistry 22:4, pages 533-539.
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Makiko Tanaka, Benjamin Elias & Jacqueline K. Barton. (2010) DNA-Mediated Electron Transfer in Naphthalene-Modified Oligonucleotides. The Journal of Organic Chemistry 75:8, pages 2423-2428.
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Frank Seela & Sachin A. Ingale. (2009) “Double Click” Reaction on 7-Deazaguanine DNA: Synthesis and Excimer Fluorescence of Nucleosides and Oligonucleotides with Branched Side Chains Decorated with Proximal Pyrenes. The Journal of Organic Chemistry 75:2, pages 284-295.
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Igor A. Prokhorenko, Irina V. Astakhova, Kuvat T. Momynaliev, Timofei S. Zatsepin & Vladimir A. Korshun. 2009. Single Nucleotide Polymorphisms. Single Nucleotide Polymorphisms
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Irina V. Astakhova, Vladimir A. Korshun & Jesper Wengel. (2008) Highly Fluorescent Conjugated Pyrenes in Nucleic Acid Probes: (Phenylethynyl)pyrenecarbonyl-Functionalized Locked Nucleic Acids. Chemistry - A European Journal 14:35, pages 11010-11026.
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Irina V. Astakhova, Andrei D. Malakhov, Irina A. Stepanova, Alexey V. Ustinov, Stanislav L. Bondarev, Alexander S. Paramonov & Vladimir A. Korshun. (2007) 1-Phenylethynylpyrene (1-PEPy) as Refined Excimer Forming Alternative to Pyrene: Case of DNA Major Groove Excimer. Bioconjugate Chemistry 18:6, pages 1972-1980.
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Ivana Kosiova & Pavol Kois. (2007) Synthesis of Novel Coumarin-Based Fluorescent Probes. Collection of Czechoslovak Chemical Communications 72:8, pages 996-1004.
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Igor A. Prokhorenko, Andrei D. Malakhov, Anna A. Kozlova, Kuvat Momynaliev, Vadim M. Govorun & Vladimir A. Korshun. (2006) Phenylethynylpyrene-labeled oligonucleotide probes for excimer fluorescence SNP analysis of 23S rRNA gene in clarithromycin-resistant Helicobacter pylori strains. Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis 599:1-2, pages 144-151.
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A. Trifonov, M. Raytchev, I. Buchvarov, M. Rist, J. Barbaric, H.-A. Wagenknecht & T. Fiebig. (2005) Ultrafast Energy Transfer and Structural Dynamics in DNA. The Journal of Physical Chemistry B 109:41, pages 19490-19495.
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Chikara Dohno & Isao Saito. (2005) Discrimination of Single-Nucleotide Alterations by G-Specific Fluorescence Quenching. ChemBioChem 6:6, pages 1075-1081.
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Andrei D. Malakhov, Mikhail V. Skorobogatyi, Igor A. Prokhorenko, Sergei V. Gontarev, Dmitry T. Kozhich, Dmitry A. Stetsenko, Irina A. Stepanova, Zakhar O. Shenkarev, Yuri A. Berlin & Vladimir A. Korshun. (2004) 1‐(Phenylethynyl)pyrene and 9,10‐Bis(phenylethynyl)anthracene, Useful Fluorescent Dyes for DNA Labeling: Excimer Formation and Energy Transfer. European Journal of Organic Chemistry 2004:6, pages 1298-1307.
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Lars H. Thoresen, Guan-Sheng Jiao, Wade C. Haaland, Michael L. Metzker & Kevin Burgess. (2003) Rigid, Conjugated, Fluoresceinated Thymidine Triphosphates: Syntheses and Polymerase Mediated Incorporation into DNA Analogues. Chemistry - A European Journal 9:19, pages 4603-4610.
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Manuela Rist, Nicole Amann & Hans‐Achim Wagenknecht. (2003) Preparation of 1‐Ethynylpyrene‐Modified DNA via Sonogashira‐Type Solid‐Phase Couplings and Characterization of the Fluorescence Properties for Electron‐Transfer Studies. European Journal of Organic Chemistry 2003:13, pages 2498-2504.
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Alokes Majumdar, Alexander Khorlin, Natalia Dyatkina, F.-L. Michael Lin, James Powell, Jilan Liu, Zhizhong Fei, Yuri Khripine, Kyoichi A. Watanabe, Jay George, Peter M. Glazer & Michael M. Seidman. (1998) Targeted gene knockout mediated by triple helix forming oligonucleotides. Nature Genetics 20:2, pages 212-214.
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K.V Balakin, V.A Korshun, I.I Mikhalev, G.V Maleev, A.D Malakhov, I.A Prokhorenko & Yu.A Berlin. (1998) Conjugates of oligonucleotides with polyaromatic fluorophores as promising DNA probes1This paper was a finalist for the Biosensors & Bioelectronics Award for the most original contribution to the Congress.1. Biosensors and Bioelectronics 13:7-8, pages 771-778.
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V. A. KORSHUN, I. A. PROKHORENKO, S. V. GONTAREV, M. V. SKOROBOGATYI, K. V. BALAKIN, E. V. MANASOVA, A. D. MALAKHOV & YU. A. BERLIN. (2010) ChemInform Abstract: New Pyrene Derivatives for Fluorescent Labeling of Oligonucleotides.. ChemInform 29:12.
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