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Journal of Biomolecular Structure and Dynamics Volume 31, 2013 - Issue 11
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Articles

Compensatory nature of Chargaff’s second parity rule

Alexandra E. RapoportGenome Diversity Center, Institute of Evolution, University of Haifa, Mount Carmel, Haifa, 31905, Israel.Correspondence[email protected]
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Edward N. TrifonovGenome Diversity Center, Institute of Evolution, University of Haifa, Mount Carmel, Haifa, 31905, Israel.;Central European Institute of Technology and Faculty of Science, Masaryk University, Kamenice 5, Brno, CZ-62500, Czech Republic.
Pages 1324-1336 | Received 02 May 2012, Accepted 24 Sep 2012, Published online: 12 Nov 2012

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Xiaoyin Li, Paul Doukhan & Jean-Paul Feugeas. (2017) Statistical inference for DNA sequences of promoters: a non-stationary qualitative model. Statistics 51:1, pages 154-166.
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Marija Rosandić, Ines Vlahović, Matko Glunčić & Vladimir Paar. (2016) Trinucleotide’s quadruplet symmetries and natural symmetry law of DNA creation ensuing Chargaff’s second parity rule. Journal of Biomolecular Structure and Dynamics 34:7, pages 1383-1394.
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Vladimir N. Babenko, Vladimir F. Matvienko & Nataly S. Safronova. (2015) 19 Implication of transposons distribution on chromatin state and genome architecture in human. Journal of Biomolecular Structure and Dynamics 33:sup1, pages 10-11.
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Md Samim Hassan, Syed Sahajada Mahafujul Alam, Arijit Samanta, Mehboob Hoque & Safdar Ali. (2023) Codon usage patterns of the eleven SARS-CoV-2 variants with reference to the Wuhan sequence. Gene Reports, pages 101861.
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Marija Rosandić & Vladimir Paar. (2023) The Evolution of Life Is a Road Paved with the DNA Quadruplet Symmetry and the Supersymmetry Genetic Code. International Journal of Molecular Sciences 24:15, pages 12029.
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Marija Rosandić, Ines Vlahović, Ivan Pilaš, Matko Glunčić & Vladimir Paar. (2022) An Explanation of Exceptions from Chargaff’s Second Parity Rule/Strand Symmetry of DNA Molecules. Genes 13:11, pages 1929.
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Rekha Khandia, Azmat Ali Khan, Athanasios Alexiou, Sergey Nikolaevich Povetkin & Marina Nikolaevna Verevkina. (2022) Codon Usage Analysis of Pro-Apoptotic Bim Gene Isoforms. Journal of Alzheimer's Disease 86:4, pages 1711-1725.
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Giovanni Villani. (2022) Affinity and Correlation in DNA. J 5:2, pages 214-231.
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Jiayu Li, Yaqiong Guo, Dawn M. Roellig, Na Li, Yaoyu Feng & Lihua Xiao. (2021) Cryptosporidium felis differs from other Cryptosporidium spp. in codon usage. Microbial Genomics 7:12.
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Utsang Kumar, Rekha Khandia, Shailja Singhal, Nidhi Puranik, Meghna Tripathi, Atul Kumar Pateriya, Raju Khan, Talha Bin Emran, Kuldeep Dhama, Ashok Munjal, Taha Alqahtani & Ali M. Alqahtani. (2021) Insight into Codon Utilization Pattern of Tumor Suppressor Gene EPB41L3 from Different Mammalian Species Indicates Dominant Role of Selection Force. Cancers 13:11, pages 2739.
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Marija Rosandić, Ines Vlahović & Vladimir Paar. (2019) Novel look at DNA and life—Symmetry as evolutionary forcing. Journal of Theoretical Biology 483, pages 109985.
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Rekha Khandia, Shailja Singhal, Utsang Kumar, Afzal Ansari, Ruchi Tiwari, Kuldeep Dhama, Jayashankar Das, Ashok Munjal & Raj Kumar Singh. (2019) Analysis of Nipah Virus Codon Usage and Adaptation to Hosts. Frontiers in Microbiology 10.
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Jon Bohlin & John H.-O. Pettersson. (2019) Evolution of Genomic Base Composition: From Single Cell Microbes to Multicellular Animals. Computational and Structural Biotechnology Journal 17, pages 362-370.
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Sergey Petoukhov, Elena Petukhova & Vitaliy Svirin. 2019. Advances in Computer Science for Engineering and Education. Advances in Computer Science for Engineering and Education 588 600 .
Donald R. ForsdykeDonald R. Forsdyke. 2016. Evolutionary Bioinformatics. Evolutionary Bioinformatics 63 82 .
Edward N. Trifonov & Reshma Nibhani. (2015) Review fifteen years of search for strong nucleosomes. Biopolymers 103:8, pages 432-437.
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