Journal of Biomolecular Structure and Dynamics, Volume 31, Issue 11 (2013)

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Journal of Biomolecular Structure and Dynamics, Volume 31, Issue 11 (2013)

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Articles

Article
Investigation of silent information regulator 1 (Sirt1) agonists from Traditional Chinese Medicine
Kuan-Chung Chen, Yi-Ru Jian, Mao-Feng Sun, Tung-Ti Chang, Cheng-Chun Lee & Calvin Yu-Chian Chen
Pages: 1207-1218
Published online: 17 Oct 2012
AbstractforInvestigation of silent information regulator 1 (Sirt1) agonists from Traditional Chinese Medicine | Full Text | References | PDF (1.7 MB)
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Article
Han ethnicity-specific type 2 diabetic treatment from traditional Chinese medicine?
Kuan-Chung Chen, Su-Sen Chang, Fuu-Jen Tsai & Calvin Yu-Chian Chen
Pages: 1219-1235
Published online: 12 Nov 2012
AbstractforHan ethnicity-specific type 2 diabetic treatment from traditional Chinese medicine? | Full Text | References | PDF (3.4 MB)
  • 167 Views
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Article
A novel and efficient ligand-based virtual screening approach using the HWZ scoring function and an enhanced shape-density model
Adel Hamza, Ning-Ning Wei, Ce Hao, Zhilong Xiu & Chang-Guo Zhan
Pages: 1236-1250
Published online: 12 Nov 2012
AbstractforA novel and efficient ligand-based virtual screening approach using the HWZ scoring function and an enhanced shape-density model | Full Text | References | PDF (705.1 KB)
  • 175 Views
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Article
Computational modeling of human coreceptor CCR5 antagonist as a HIV-1 entry inhibitor: using an integrated homology modeling, docking, and membrane molecular dynamics simulation analysis approach
Changdev G. Gadhe, Gugan Kothandan & Seung Joo Cho
Pages: 1251-1276
Published online: 16 Nov 2012
AbstractforComputational modeling of human coreceptor CCR5 antagonist as a HIV-1 entry inhibitor: using an integrated homology modeling, docking, and membrane molecular dynamics simulation analysis approach | Full Text | References | PDF (1.7 MB) | Supplemental
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Article
Molecular dynamics simulations of retinoblastoma protein
C. Ramakrishnan, V. Subramanian, K. Balamurugan & D. Velmurugan
Pages: 1277-1292
Published online: 19 Nov 2012
AbstractforMolecular dynamics simulations of retinoblastoma protein | Full Text | References | PDF (2.7 MB)
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Article
Towards functional repertoire of the earliest proteins
Y. Sobolevsky, R.C. Guimarães & E.N. Trifonov
Pages: 1293-1300
Published online: 12 Nov 2012
AbstractforTowards functional repertoire of the earliest proteins | Full Text | References | PDF (1.5 MB)
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Article
Cooperative stabilization of Zn2+:DNA complexes through netropsin binding in the minor groove of FdU-substituted DNA
Supratim Ghosh, Freddie R. Salsbury Jr., David A. Horita & William H. Gmeiner
Pages: 1301-1310
Published online: 16 Nov 2012
AbstractforCooperative stabilization of Zn2+:DNA complexes through netropsin binding in the minor groove of FdU-substituted DNA | Full Text | References | PDF (742 KB)
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Article
Effect of initial ion positions on the interactions of monovalent and divalent ions with a DNA duplex as revealed with atomistic molecular dynamics simulations
Timothy J. Robbins & Yongmei Wang
Pages: 1311-1323
Published online: 16 Nov 2012
AbstractforEffect of initial ion positions on the interactions of monovalent and divalent ions with a DNA duplex as revealed with atomistic molecular dynamics simulations | Full Text | References | PDF (811.3 KB) | Supplemental
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Article
Compensatory nature of Chargaff’s second parity rule
Alexandra E. Rapoport & Edward N. Trifonov
Pages: 1324-1336
Published online: 12 Nov 2012
AbstractforCompensatory nature of Chargaff’s second parity rule | Full Text | References | PDF (554.9 KB)
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Article
A Raman scattering study of the interactions of DNA with its water of hydration
Scott A. Lee, Nong-Jian Tao & Allan Rupprecht
Pages: 1337-1342
Published online: 12 Nov 2012
AbstractforA Raman scattering study of the interactions of DNA with its water of hydration | Full Text | References | PDF (201.9 KB)
  • 161 Views
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Article
An siRNA designing tool with a unique functional off-target filtering approach
Shaoli Das, Suman Ghosal, Karol Kozak & Jayprokas Chakrabarti
Pages: 1343-1357
Published online: 12 Nov 2012
AbstractforAn siRNA designing tool with a unique functional off-target filtering approach | Full Text | References | PDF (728.2 KB) | Supplemental
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