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Journal of Biomolecular Structure and Dynamics Volume 37, 2019 - Issue 2
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Research Article

Classical molecular dynamics simulation of seryl tRNA synthetase and threonyl tRNA synthetase bound with tRNA and aminoacyl adenylate

Saheb DuttaDepartment of Chemistry, University of Kalyani, Kalyani, Nadia741235, West Bengal, India
&
Nilashis NandiDepartment of Chemistry, University of Kalyani, Kalyani, Nadia741235, West Bengal, IndiaCorrespondence[email protected]
Pages 336-358 | Received 20 Sep 2017, Accepted 03 Jan 2018, Published online: 23 Jan 2018

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Amrita Saha & Nilashis Nandi. (2022) Role of the transfer ribonucleic acid (tRNA) bound magnesium ions in the charging step of aminoacylation reaction in the glutamyl tRNA synthetase and the seryl tRNA synthetase bound with cognate tRNA. Journal of Biomolecular Structure and Dynamics 40:18, pages 8538-8559.
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C. Ramakrishnan, R. Nagarajan, M. Sekijima & M. Michael Gromiha. (2021) Molecular dynamics simulations of cognate and non-cognate AspRS-tRNAAsp complexes. Journal of Biomolecular Structure and Dynamics 39:2, pages 493-501.
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Amrita Saha, Saheb Dutta & Nilashis Nandi. (2020) Inhibition of seryl tRNA synthetase by seryl nucleoside moiety (SB-217452) of albomycin antibiotic. Journal of Biomolecular Structure and Dynamics 38:8, pages 2440-2454.
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Garima Singh, Shubhandra Tripathi, Karuna Shanker & Ashok Sharma. (2019) Cadmium-induced conformational changes in type 2 metallothionein of medicinal plant Coptis japonica: insights from molecular dynamics studies of apo, partially and fully metalated forms. Journal of Biomolecular Structure and Dynamics 37:6, pages 1520-1533.
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Articles from other publishers (1)

Saheb Dutta & Amalendu Chandra. (2023) A Multiple Proton Transfer Mechanism for the Charging Step of the Aminoacylation Reaction at the Active Site of Aspartyl tRNA Synthetase. Journal of Chemical Information and Modeling 63:6, pages 1819-1832.
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