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Sona Lyndem, Rabiul Gazi, Madhurima Jana, Vinay Kumar Belwal & Atanu Singha Roy. (2022) Molecular recognition of two bioactive coumarin derivatives 7-hydroxycoumarin and 4-methyl-7-hydroxycoumarin by hen egg white lysozyme: Exploring the binding mechanism, thermodynamic parameters and structural changes using multispectroscopic and computational approaches. Journal of Biomolecular Structure and Dynamics 40:24, pages 13872-13888.
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Amanda Ponce Morais Cerqueira, Isis Bugia Santana, Janay Stefany Carneiro Araújo, Hélimar Gonçalves Lima, Maria José Moreira Batatinha, Alexsandro Branco, Manoelito Coelho dos Santos Junior & Mariana Borges Botura. (2022) Homology modeling, docking, molecular dynamics and in vitro studies to identify Rhipicephalus microplus acetylcholinesterase inhibitors. Journal of Biomolecular Structure and Dynamics 40:15, pages 6787-6797.
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Saumen Saha & Joydeep Chowdhury. (2021) Understanding the structure and conformation of bovine hemoglobin in presence of the drug hydroxyurea: multi-spectroscopic studies supported by docking and molecular dynamics simulation. Journal of Biomolecular Structure and Dynamics 39:10, pages 3533-3547.
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Debanjan Kundu, Umesh & Vikash Kumar Dubey. (2021) Interaction of selected biomolecules and metabolites with amyloidogenic proteins. Journal of Biomolecular Structure and Dynamics 39:9, pages 3061-3070.
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Yao Houndonougbo, Bethany Pugh, Kandise VanWormer, Caitlin April & Nicholas Burgis. (2021) Structural dynamics of inosine triphosphate pyrophosphatase (ITPA) protein and two clinically relevant mutants: molecular dynamics simulations. Journal of Biomolecular Structure and Dynamics 39:4, pages 1236-1247.
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Osita Sunday Nnyigide & Kyu Hyun. (2021) Molecular dynamics studies of the protective and destructive effects of sodium dodecyl sulfate in thermal denaturation of hen egg-white lysozyme and bovine serum albumin. Journal of Biomolecular Structure and Dynamics 39:3, pages 1106-1120.
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Sharat Sarmah, Somdev Pahari, Sourav Das, Vinay Kumar Belwal, Madhurima Jana & Atanu Singha Roy. (2021) Non-enzymatic glycation of human serum albumin modulates its binding efficacy towards bioactive flavonoid chrysin: A detailed study using multi-spectroscopic and computational methods. Journal of Biomolecular Structure and Dynamics 39:2, pages 476-492.
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Long Sun, Kangquan Wang, Wenze Li, Xiaohui Pang, Pengfei Zhao, Rimao Hua, Xiaofan Yang & Meiqing Zhu. (2023) Enantioselective effects of chiral prothioconazole and its metabolites: Oxidative stress in HepG2 cells and lysozyme activity. Pesticide Biochemistry and Physiology 197, pages 105696.
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Mohd Sajid Ali & Hamad A. Al-Lohedan. (2023) Spectroscopic and Molecular Docking Studies of the Interaction of Non-steroidal Anti-inflammatory Drugs with a Carrier Protein: an Interesting Case of Inner Filter Effect and Intensity Enhancement in Protein Fluorescence. Journal of Fluorescence.
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Sadia Nudrat, Piyusaranjan Giri, Dasuklang Lyngdoh Nongbri, Kalpana Kumari, Sana Quraishi, Madhurima Jana, Kripamoy Aguan & Atanu Singha Roy. (2023) Analysis of the Binding Mechanism of Bioactive Coumarins with Ovalbumin: Further Investigation into the Inhibitory Effects toward Protein Fibrillation. ACS Food Science & Technology 3:5, pages 866-880.
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Masahiko Taniguchi, Connor A. LaRocca, Jake D. Bernat & Jonathan S. Lindsey. (2023) Digital Database of Absorption Spectra of Diverse Flavonoids Enables Structural Comparisons and Quantitative Evaluations. Journal of Natural Products 86:4, pages 1087-1119.
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Yutong Li, Zhen Zhao, Xiao Nai, Mingyuan Li, Jing Kong, Yanrong Chen, Min Liu, Qian Zhang, Jie Liu & Hui Yan. (2023) Effects of Temperature, Metal Ions and Biosurfactants on Interaction Mechanism between Caffeic Acid Phenethyl Ester and Hemoglobin. Molecules 28:8, pages 3440.
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Yang Du, Fengjiao Zhao, Junpeng Xing, Zhiqiang Liu & Meng Cui. (2023) Stabilization of Labile Lysozyme–Ligand Interactions in Native Electrospray Ionization Mass Spectrometry. Journal of the American Society for Mass Spectrometry 34:3, pages 366-373.
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Vibeizonuo Rupreo, Soching Luikham & Jhimli Bhattacharyya. (2022) Protein‐binding characteristics of yohimbine, a natural indole alkaloid‐based drug for erectile dysfunction. Luminescence 37:9, pages 1532-1540.
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Sona Lyndem, Rabiul Gazi, Vinay Kumar Belwal, Anindita Bhatta, Madhurima Jana & Atanu Singha Roy. (2022) Binding of bioactive esculin and esculetin with hen egg white lysozyme: Spectroscopic and computational methods to comprehensively elucidate the binding affinities, interacting forces, and conformational alterations at molecular level. Journal of Molecular Liquids 360, pages 119423.
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Xiao Nai, Yanrong Chen, Qian Zhang, Shengyu Hao, Hongzhuan Xuan & Jie Liu. (2022) Interaction between caffeic acid phenethyl ester and protease: monitoring by spectroscopic and molecular docking approaches. Luminescence 37:6, pages 1025-1036.
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He Liu, Danfeng Wang, Yongfang Ren, Lu Wang, Tianxin Weng, Jie Liu, Yushu Wu, Zhuang Ding & Min Liu. (2022) Multispectroscopic and synergistic antioxidant study on the combined binding of caffeic acid and (-)-epicatechin gallate to lysozyme. Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy 272, pages 120986.
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Sourav Das, Anirudh Singh, Sintu Kumar Samanta & Atanu Singha Roy. (2022) Naturally occurring anthraquinones as potential inhibitors of SARS-CoV-2 main protease: an integrated computational study. Biologia 77:4, pages 1121-1134.
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Sourav Das, Leader Langbang, Mahabul Haque, Vinay Kumar Belwal, Kripamoy Aguan & Atanu Singha Roy. (2021) Biocompatible silver nanoparticles: An investigation into their protein binding efficacies, anti-bacterial effects and cell cytotoxicity studies. Journal of Pharmaceutical Analysis 11:4, pages 422-434.
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Evan K. Massaro, Ishan Goswami, Scott S. Verbridge & Michael R. von Spakovsky. (2021) Electro-chemo-mechanical model to investigate multi-pulse electric-field-driven integrin clustering. Bioelectrochemistry 137, pages 107638.
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Mohd. Sajid Ali & Hamad A. Al-Lohedan. (2020) Spectroscopic and Molecular Docking Investigation on the Noncovalent Interaction of Lysozyme with Saffron Constituent “Safranal”. ACS Omega 5:16, pages 9131-9141.
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Sourav Das, Zaved Hazarika, Sharat Sarmah, Kakali Baruah, Mostofa Ataur Rohman, Debojit Paul, Anupam Nath Jha & Atanu Singha Roy. (2020) Exploring the interaction of bioactive kaempferol with serum albumin, lysozyme and hemoglobin: A biophysical investigation using multi-spectroscopic, docking and molecular dynamics simulation studies. Journal of Photochemistry and Photobiology B: Biology 205, pages 111825.
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Yanqiu Zuo, Yuefan Rui, Jie Xu, Lulu Yang & Zhongsheng Yi. (2019) Multi‐spectroscopic and molecular dynamics simulations investigation of the binding mechanism of polybrominated diphenyl ethers to hen egg white lysozyme. Luminescence 34:7, pages 749-758.
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Sourav Das, Somdev Pahari, Sharat Sarmah, Mostofa Ataur Rohman, Debojit Paul, Madhurima Jana & Atanu Singha Roy. (2019) Lysozyme–luteolin binding: molecular insights into the complexation process and the inhibitory effects of luteolin towards protein modification. Physical Chemistry Chemical Physics 21:23, pages 12649-12666.
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