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Journal of Biomolecular Structure and Dynamics Volume 37, 2019 - Issue 17
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Research Article

Characterizing the structural variability of HIV-2 protease upon the binding of diverse ligands using a structural alphabet approach

Dhoha TrikiSorbonne Paris Cité, INSERM, MTi, UMR-S973, Université Paris Diderot, Paris, France; View further author information
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Sandrine FartekSorbonne Paris Cité, INSERM, MTi, UMR-S973, Université Paris Diderot, Paris, France; View further author information
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Benoit VisseauxSorbonne Paris Cité, INSERM, AP-HP, Hôpital Bichat, IAME, UMR 1137, Université Paris Diderot, Virologie, Paris, France; ORCID Iconhttp://orcid.org/0000-0002-9279-5538View further author information
ORCID Icon,
Diane DescampsSorbonne Paris Cité, INSERM, AP-HP, Hôpital Bichat, IAME, UMR 1137, Université Paris Diderot, Virologie, Paris, France; View further author information
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Anne-Claude CamprouxSorbonne Paris Cité, Université Paris-Diderot, CNRS, INSERM, Biologie Fonctionnelle et Adaptative UMR 8251, Computational Modeling of Protein Ligand Interactions U1133, Paris, FranceORCID Iconhttp://orcid.org/0000-0001-8821-9952View further author information
ORCID Icon &
Leslie RegadSorbonne Paris Cité, Université Paris-Diderot, CNRS, INSERM, Biologie Fonctionnelle et Adaptative UMR 8251, Computational Modeling of Protein Ligand Interactions U1133, Paris, FranceCorrespondence[email protected]
ORCID Iconhttp://orcid.org/0000-0002-9292-5283View further author information
ORCID Icon
Pages 4658-4670 | Received 21 Aug 2018, Accepted 18 Dec 2018, Published online: 01 Feb 2019

Citations (6)

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Read on this site (3)

Dhoha Triki, Maxime Kermarrec, Benoît Visseaux, Diane Descamps, Delphine Flatters, Anne-Claude Camproux & Leslie Regad. (2020) Exploration of the effects of sequence variations between HIV-1 and HIV-2 proteases on their three-dimensional structures. Journal of Biomolecular Structure and Dynamics 38:17, pages 5014-5026.
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Jianzhong chen, Baohua Yin, Laixue Pang, Wei Wang, John Z. H. Zhang & Tong Zhu. (2020) Binding modes and conformational changes of FK506-binding protein 51 induced by inhibitor bindings: insight into molecular mechanisms based on multiple simulation technologies. Journal of Biomolecular Structure and Dynamics 38:7, pages 2141-2155.
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Jianzhong Chen, Laixue Pang, Wei Wang, Lifei Wang, John Z. H. Zhang & Tong Zhu. (2020) Decoding molecular mechanism of inhibitor bindings to CDK2 using molecular dynamics simulations and binding free energy calculations. Journal of Biomolecular Structure and Dynamics 38:4, pages 985-996.
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Articles from other publishers (3)

Anne Badel, Laëtitia Breuil, Pierre Laville & Leslie Regad. (2022) Exploration of the Structural Asymmetry Induced by the Intrinsic Flexibility of HIV-2 Protease. Symmetry 14:2, pages 362.
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Pierre Laville, Michel Petitjean & Leslie Regad. (2021) Structural Impacts of Drug-Resistance Mutations Appearing in HIV-2 Protease. Molecules 26:3, pages 611.
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Pierre Laville, Sandrine Fartek, Natacha Cerisier, Delphine Flatters, Michel Petitjean & Leslie Regad. (2020) Impacts of drug resistance mutations on the structural asymmetry of the HIV-2 protease. BMC Molecular and Cell Biology 21:1.
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