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RESEARCH PAPERS

Genome wide chromatin occupancy of mrhl RNA and its role in gene regulation in mouse spermatogonial cells

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Pages 1262-1279 | Received 09 Apr 2014, Accepted 27 Sep 2014, Published online: 27 Jan 2015

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Debosree Pal, Sangeeta Dutta, Dhanur P. Iyer, Deepika Shriram, Utsa Bhaduri & M. R. S. Rao. (2022) Identification of PAX6 and NFAT4 as the Transcriptional Regulators of the Long Noncoding RNA Mrhl in Neuronal Progenitors. Molecular and Cellular Biology 42:11.
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Bhavana Kayyar, Anjhana C. Ravikkumar, Utsa Bhaduri & M. R. S. Rao. (2022) Regulation of Sox8 through lncRNA Mrhl-Mediated Chromatin Looping in Mouse Spermatogonia. Molecular and Cellular Biology 42:5.
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Monalisa Das, Arun Renganathan, Shrinivas Nivrutti Dighe, Utsa Bhaduri, Abhijith Shettar, Geetashree Mukherjee, Paturu Kondaiah & Manchanahalli R. Satyanarayana Rao. (2018) DDX5/p68 associated lncRNA LOC284454 is differentially expressed in human cancers and modulates gene expression. RNA Biology 15:2, pages 214-230.
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Shubhangini Kataruka, Vijay Suresh Akhade, Bhavana Kayyar & Manchanahalli R. Satyanarayana Rao. (2017) Mrhl Long Noncoding RNA Mediates Meiotic Commitment of Mouse Spermatogonial Cells by Regulating Sox8 Expression. Molecular and Cellular Biology 37:14.
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Articles from other publishers (24)

Ajay Kumar Danga & Pramod C. Rath. (2024) Molecular cloning, expression and cellular localization of two long noncoding RNAs (mLINC-RBE and mLINC-RSAS) in the mouse testis. International Journal of Biological Macromolecules 255, pages 128106.
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Josei Sato, Yui Satoh, Takehiro Yamamoto, Takehiro Watanabe, Shin Matsubara, Honoo Satake & Atsushi P. Kimura. (2024) PTBP2 binds to a testis-specific long noncoding RNA, Tesra, and activates transcription of the Prss42/Tessp-2 gene. Gene 893, pages 147907.
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Ali Ghasemi, Zohreh Qaffaripour, Mehdi Tourani, Kiarash Saleki, Nasim Rahmani-Kukia, Seyyed Hossein Khatami & Mortaza Taheri-Anganeh. (2023) The relationship between long non-coding RNAs and Wnt/β-catenin signaling pathway in the pathogenesis of Alzheimer’s disease. Experimental Neurology 366, pages 114434.
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Dan CHU, Bin CHEN, Bo WENG, Sai-na YAN, Yan-fei YIN, Xiang-wei TANG & Mao-liang RAN. (2023) Long non coding RNA FPFSC promotes immature porcine Sertoli cell growth through modulating the miR-326/EHMT2 axis1. Journal of Integrative Agriculture.
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Subhendu Roy Choudhury, Sangeeta Dutta, Utsa Bhaduri & Manchanahalli R Satyanarayana Rao. (2021) LncRNA Hmrhl regulates expression of cancer related genes in chronic myelogenous leukemia through chromatin association. NAR Cancer 3:4.
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Quanshun Mei, Chuanke Fu, Goutam Sahana, Yilong Chen, Lilin Yin, Yuanxin Miao, Shuhong Zhao & Tao Xiang. (2021) Identification of new semen trait-related candidate genes in Duroc boars through genome-wide association and weighted gene co-expression network analyses. Journal of Animal Science 99:7.
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敦 木村. (2021) マウスの精巣における長鎖非コードRNAの作用と生理機能. Comparative Endocrinology 47:173, pages 49-54.
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Holly R. Pinkney, Brandon M. Wright & Sarah D. Diermeier. (2020) The lncRNA Toolkit: Databases and In Silico Tools for lncRNA Analysis. Non-Coding RNA 6:4, pages 49.
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Bahlibi Weldegebriall Sahlu, Shanjiang Zhao, Xiuge Wang, Saqib Umer, Huiying Zou, Jinming Huang & Huabin Zhu. (2020) Long noncoding RNAs: new insights in modulating mammalian spermatogenesis. Journal of Animal Science and Biotechnology 11:1.
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Xiao Ma, Shuangshuang Cen, Luming Wang, Chao Zhang, Limin Wu, Xue Tian, Qisheng Wu, Xuejun Li & Xiaoqing Wang. (2020) Genome-wide identification and comparison of differentially expressed profiles of miRNAs and lncRNAs with associated ceRNA networks in the gonads of Chinese soft-shelled turtle, Pelodiscus sinensis. BMC Genomics 21:1.
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Yunqing Lin, Tianyuan Liu, Tianyu Cui, Zhao Wang, Yuncong Zhang, Puwen Tan, Yan Huang, Jia Yu & Dong Wang. (2020) RNAInter in 2020: RNA interactome repository with increased coverage and annotation. Nucleic Acids Research 48:D1, pages D189-D197.
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Subhash Chandra Lakhotia, Bibekanand Mallick & Jyoti Roy. 2020. Rna-Based Regulation in Human Health and Disease. Rna-Based Regulation in Human Health and Disease 5 57 .
Marianna Nicoletta Rossi & Rossella Maione. 2020. RNA-Chromatin Interactions. RNA-Chromatin Interactions 17 28 .
Zhenlong Kang, Na Qiao, Gaoyang Liu, Hanming Chen, Zhaoxin Tang & Ying Li. (2019) Copper-induced apoptosis and autophagy through oxidative stress-mediated mitochondrial dysfunction in male germ cells. Toxicology in Vitro 61, pages 104639.
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Roshan Fatima, Subhendu Roy Choudhury, Divya T.R, Utsa Bhaduri & M.R.S. Rao. (2019) A novel enhancer RNA, Hmrhl, positively regulates its host gene, phkb, in chronic myelogenous leukemia. Non-coding RNA Research 4:3, pages 96-108.
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Fan Zhou, Wei Chen, Yiqun Jiang & Zuping He. (2019) Regulation of long non-coding RNAs and circular RNAs in spermatogonial stem cells. Reproduction 158:1, pages R15-R25.
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Guillaume Giraud, Sophie Terrone & Cyril F. Bourgeois. (2018) Functions of DEAD box RNA helicases DDX5 and DDX17 in chromatin organization and transcriptional regulation. BMB Reports 51:12, pages 613-622.
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Santhilal Subhash, Kankadeb Mishra, Vijay Suresh Akhade, Meena Kanduri, Tanmoy Mondal & Chandrasekhar Kanduri. (2018) H3K4me2 and WDR5 enriched chromatin interacting long non-coding RNAs maintain transcriptionally competent chromatin at divergent transcriptional units. Nucleic Acids Research 46:18, pages 9384-9400.
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Hua Yang, Feng Wang, Fengzhe Li, Caifang Ren, Jing Pang, Yongjie Wan, Ziyu Wang, Xu Feng & Yanli Zhang. (2018) Comprehensive analysis of long noncoding RNA and mRNA expression patterns in sheep testicular maturation†. Biology of Reproduction 99:3, pages 650-661.
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Vasiliki Zarkou, Alexandros Galaras, Antonis Giakountis & Pantelis Hatzis. (2018) Crosstalk mechanisms between the WNT signaling pathway and long non-coding RNAs. Non-coding RNA Research 3:2, pages 42-53.
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Mohamad Moustafa Ali, Vijay Suresh Akhade, Subazini Thankaswamy Kosalai, Santhilal Subhash, Luisa Statello, Matthieu Meryet-Figuiere, Jonas Abrahamsson, Tanmoy Mondal & Chandrasekhar Kanduri. (2018) PAN-cancer analysis of S-phase enriched lncRNAs identifies oncogenic drivers and biomarkers. Nature Communications 9:1.
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Debosree Pal & M. R. S. Rao. 2017. Long Non Coding RNA Biology. Long Non Coding RNA Biology 223 252 .
Chenwang Zhang, Liuze Gao & Eugene Yujun Xu. (2016) LncRNA, a new component of expanding RNA-protein regulatory network important for animal sperm development. Seminars in Cell & Developmental Biology 59, pages 110-117.
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Vijay Suresh Akhade, Shrinivas Nivrutti Dighe, Shubhangini Kataruka & Manchanahalli R. Satyanarayana Rao. (2016) Mechanism of Wnt signaling induced down regulation of mrhl long non-coding RNA in mouse spermatogonial cells . Nucleic Acids Research 44:1, pages 387-401.
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