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RNA Biology Volume 17, 2020 - Issue 8: tRNA fragments
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Research Paper

Arabidopsis tRNA-derived fragments as potential modulators of translation

Stéphanie Lalandea Institut de biologie moléculaire des plantes-CNRS, Université de Strasbourg, Strasbourg, FranceView further author information
,
Rémy Merretb Université de Perpignan Via Domitia, Perpignan, FranceORCID Iconhttps://orcid.org/0000-0002-3790-1115View further author information
ORCID Icon,
Thalia Salinas-Giegéa Institut de biologie moléculaire des plantes-CNRS, Université de Strasbourg, Strasbourg, FranceView further author information
&
Laurence Drouarda Institut de biologie moléculaire des plantes-CNRS, Université de Strasbourg, Strasbourg, FranceCorrespondence[email protected]
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Pages 1137-1148 | Received 23 Oct 2019, Accepted 23 Jan 2020, Published online: 05 Feb 2020

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Aswathi U, Pooja Viswam, Divya Kattupalli & Soniya Eppurathu Vasudevan. (2023) Elucidation of transfer RNAs as stress regulating agents and the experimental strategies to conceive the functional role of tRNA-derived fragments in plants. Critical Reviews in Biotechnology 43:2, pages 275-292.
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Norbert Polacek & Pavel Ivanov. (2020) The regulatory world of tRNA fragments beyond canonical tRNA biology. RNA Biology 17:8, pages 1057-1059.
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Articles from other publishers (28)

Ralph Panstruga & Pietro Spanu. (2023) Transfer RNA and ribosomal RNA fragments – emerging players in plant–microbe interactions . New Phytologist.
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Bernhard Kuhle, Qi Chen & Paul Schimmel. (2023) tRNA renovatio: Rebirth through fragmentation. Molecular Cell 83:22, pages 3953-3971.
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Sirui Zhu, Yuanyuan Li, You Wu, Yanan Shen, Ying Wang, Yujie Yan, Weijun Chen, Qiong Fu, Yirong Wang, Xiang Yu & Feng Yu. (2023) The FERONIA-YUELAO module participates in translational control by modulating the abundance of tRNA fragments in Arabidopsis. Developmental Cell.
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Juan Du, Tianyi Huang, Zhen Zheng, Shuai Fang, Hongxia Deng & Kaitai Liu. (2023) Biological function and clinical application prospect of tsRNAs in digestive system biology and pathology. Cell Communication and Signaling 21:1.
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Dechang Cao. (2023) Stress-induced tRNA fragments take action in alternative splicing in Arabidopsis. Plant Physiology.
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Yuanyuan Li, Junping Gao, Ying Wang, Jun Cai, Dousheng Wu, Long Wang, Wenxuan Pu, Feng Yu & Sirui Zhu. (2023) The functions of a 5′ tRNA-Ala-derived fragment in gene expression. Plant Physiology.
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Stefan Kusch, Mansi Singh, Hannah Thieron, Pietro D. Spanu & Ralph Panstruga. (2023) Site‐specific analysis reveals candidate cross‐kingdom small RNAs, tRNA and rRNA fragments, and signs of fungal RNA phasing in the barley–powdery mildew interaction. Molecular Plant Pathology 24:6, pages 570-587.
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Sarah M Assmann, Hong-Li Chou & Philip C Bevilacqua. (2023) Rock, scissors, paper: How RNA structure informs function. The Plant Cell 35:6, pages 1671-1707.
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Junpeng ZhanBlake C. Meyers. (2023) Plant Small RNAs: Their Biogenesis, Regulatory Roles, and Functions. Annual Review of Plant Biology 74:1, pages 21-51.
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Marjorie Chery & Laurence Drouard. (2023) Plant tRNA functions beyond their major role in translation. Journal of Experimental Botany 74:7, pages 2352-2363.
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Mengdan Gong, Yongqin Deng, Yizhen Xiang & Dong Ye. (2023) The role and mechanism of action of tRNA-derived fragments in the diagnosis and treatment of malignant tumors. Cell Communication and Signaling 21:1.
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Mei Yang, Yongzhen Mo, Daixi Ren, Shun Liu, Zhaoyang Zeng & Wei Xiong. (2023) Transfer RNA-derived small RNAs in tumor microenvironment. Molecular Cancer 22:1.
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Chaojun Wang, Weiqiang Chen, Maimaiti Aili, Lei Zhu & Yan Chen. (2023) tRNA-derived small RNAs in plant response to biotic and abiotic stresses. Frontiers in Plant Science 14.
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Jiani Hou, Qianqing Li, Jun Wang & Wenfa Lu. (2022) tRFs and tRNA Halves: Novel Cellular Defenders in Multiple Biological Processes. Current Issues in Molecular Biology 44:12, pages 5949-5962.
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Suja George, Mohammed Rafi, Maitha Aldarmaki, Mohamed ElSiddig, Mariam Al Nuaimi & Khaled M. A. Amiri. (2022) tRNA derived small RNAs—Small players with big roles. Frontiers in Genetics 13.
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Hana Zand Karimi & Roger W Innes. (2022) Molecular mechanisms underlying host-induced gene silencing. The Plant Cell 34:9, pages 3183-3199.
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Kaiqing Luo, Shengyu Li, Zhao Zheng, Xiaofeng Lai, Mengzhuo Qu, Chunmei Li & Xiaorong Wan. (2022) tsRNAs and their regulation of gene expression in plants in response to abiotic stress. Chinese Science Bulletin 67:22, pages 2616-2626.
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Valentina Pecoraro, Alessia Rosina & Norbert Polacek. (2022) Ribosome-Associated ncRNAs (rancRNAs) Adjust Translation and Shape Proteomes. Non-Coding RNA 8:2, pages 22.
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Muhammad Kamran Qureshi, Piotr Gawroński, Sana Munir, Sunita Jindal & Pavel Kerchev. (2022) Hydrogen peroxide-induced stress acclimation in plants. Cellular and Molecular Life Sciences 79:2.
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M. Mar Castellano & Catharina Merchante. (2021) Peculiarities of the regulation of translation initiation in plants. Current Opinion in Plant Biology 63, pages 102073.
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Xuan Ma, Chunyan Liu & Xiaofeng Cao. (2021) Plant transfer RNA‐derived fragments: Biogenesis and functions. Journal of Integrative Plant Biology.
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Cristiane S. Alves & Fabio T. S. Nogueira. (2021) Plant Small RNA World Growing Bigger: tRNA-Derived Fragments, Longstanding Players in Regulatory Processes. Frontiers in Molecular Biosciences 8.
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Xuan Ma, Chunyan Liu, Xiaocong Kong, Jing Liu, Siju Zhang, Shanshan Liang, Weijiang Luan & Xiaofeng Cao. (2021) Extensive profiling of the expressions of tRNAs and tRNA-derived fragments (tRFs) reveals the complexities of tRNA and tRF populations in plants. Science China Life Sciences 64:4, pages 495-511.
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Marie-Laure Pinel-Marie, Régine Brielle, Camille Riffaud, Noëlla Germain-Amiot, Norbert Polacek & Brice Felden. (2021) RNA antitoxin SprF1 binds ribosomes to attenuate translation and promote persister cell formation in Staphylococcus aureus. Nature Microbiology 6:2, pages 209-220.
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Ya Yuan, Jiamei Li, Zhi He, Xiaolan Fan, Xueping Mao, Mingyao Yang & Deying Yang. (2021) tRNA-derived fragments as New Hallmarks of Aging and Age-related Diseases. Aging and disease 12:5, pages 1304.
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Shafaque Zahra, Ajeet Singh, Nikita Poddar & Shailesh Kumar. (2021) Transfer RNA-derived non-coding RNAs (tncRNAs): Hidden regulation of plants' transcriptional regulatory circuits. Computational and Structural Biotechnology Journal 19, pages 5278-5291.
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Ricardo A. Urquidi Camacho, Ansul Lokdarshi & Albrecht G. Arnim. (2020) Translational gene regulation in plants: A green new deal. WIREs RNA 11:6.
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Yaoyao Xie, Lipeng Yao, Xiuchong Yu, Yao Ruan, Zhe Li & Junming Guo. (2020) Action mechanisms and research methods of tRNA-derived small RNAs. Signal Transduction and Targeted Therapy 5:1.
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