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Epigenetics Volume 16, 2021 - Issue 9
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Research Paper

Sources of variation of DNA methylation in rainbow trout: combined effects of temperature and genetic background

Delphine Lalliasa Université Paris-Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy-en-Josas, FranceCorrespondence[email protected]
ORCID Iconhttps://orcid.org/0000-0002-1609-0827View further author information
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Maria Bernarda Université Paris-Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy-en-Josas, France;b INRAE, SIGENAE, 78350, Jouy-en-Josas, FranceORCID Iconhttps://orcid.org/0000-0001-9005-5563View further author information
ORCID Icon,
Céline Ciobotarua Université Paris-Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy-en-Josas, FranceView further author information
,
Nicolas Dechampa Université Paris-Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy-en-Josas, FranceView further author information
,
Laurent Labbéc INRAE, PEIMA, 29450, Sizun, FranceView further author information
,
Lionel Goardonc INRAE, PEIMA, 29450, Sizun, FranceView further author information
,
Jean-Michel Le Calvezc INRAE, PEIMA, 29450, Sizun, FranceView further author information
,
Marjorie Bideauc INRAE, PEIMA, 29450, Sizun, FranceView further author information
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Alexandre Fricota Université Paris-Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy-en-Josas, FranceView further author information
,
Audrey Prézelind UVSQ, INRAE, BREED, Jouy-en-Josas, FranceView further author information
,
Mathieu Charlesa Université Paris-Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy-en-Josas, France;b INRAE, SIGENAE, 78350, Jouy-en-Josas, FranceView further author information
,
Marco Moroldoa Université Paris-Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy-en-Josas, FranceORCID Iconhttps://orcid.org/0000-0002-4440-4950View further author information
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Xavier Cousina Université Paris-Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy-en-Josas, FranceORCID Iconhttps://orcid.org/0000-0002-8520-3610View further author information
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Olivier Boucheze INRAE, GeT PlaGe, 31326, Castanet-Tolosan, FranceView further author information
,
Alain Roulete INRAE, GeT PlaGe, 31326, Castanet-Tolosan, FranceORCID Iconhttps://orcid.org/0000-0002-2824-9954View further author information
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Edwige Quilleta Université Paris-Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy-en-Josas, FranceView further author information
&
Mathilde Dupont-Niveta Université Paris-Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy-en-Josas, FranceORCID Iconhttps://orcid.org/0000-0002-9299-0560View further author information
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Pages 1031-1052 | Received 09 Jul 2020, Accepted 02 Oct 2020, Published online: 30 Oct 2020

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Marandel L, Heraud C, Véron V, Laithier J, Marchand M, Quillet E, Callet T, Dupont-Nivet M & Médale F. (2022) A plant-based diet differentially affects the global hepatic methylome in rainbow trout depending on genetic background. Epigenetics 17:12, pages 1726-1737.
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Articles from other publishers (11)

Madison L. Earhart, Tessa S. Blanchard, Nicholas Strowbridge, Ravinder Sheena, Clark McMaster, Benjamin Staples, Colin J. Brauner, Daniel W. Baker & Patricia M. Schulte. (2023) Heatwave resilience of juvenile white sturgeon is associated with epigenetic and transcriptional alterations. Scientific Reports 13:1.
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Laia Navarro‐Martín, Jan A. Mennigen & Jana Asselman. 2023. Epigenetics in Aquaculture. Epigenetics in Aquaculture 45 64 .
Bror Jonsson. (2023) Thermal Effects on Ecological Traits of Salmonids. Fishes 8:7, pages 337.
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Yu Yang, Yanan Sun, Xiaoqun Zhou, Xiaohui Xu, Weijun Wang, Yanwei Feng, Zan Li, Jianmin Yang, Xiumei Liu, Bin Li & Guohua Sun. (2023) Genome-wide analysis of DNA methylation reveals significant impact of two typical high temperature stress on biological functions in Apostichopus japonicus. Aquaculture Reports 29, pages 101522.
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Songpei Zhang, Yu Cheng, Pavlína Věchtová, Sergii Boryshpolets, Nururshopa Eskander Shazada, Sayyed Mohammad Hadi Alavi, Jacky Cosson & Otomar Linhart. (2022) Potential implications of sperm DNA methylation functional properties in aquaculture management . Reviews in Aquaculture 15:2, pages 536-556.
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Clare J Venney, Hugo Cayuela, Clément Rougeux, Martin Laporte, Claire Mérot, Eric Normandeau, Maëva Leitwein, Yann Dorant, Kim Præbel, Ellen Kenchington, Marie Clément, Pascal Sirois & Louis Bernatchez. (2023) Genome-wide DNA methylation predicts environmentally driven life history variation in a marine fish. Evolution 77:1, pages 186-198.
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Peilong Li, Shibiao Liu, Lutao Du, Ghazal Mohseni, Yi Zhang & Chuanxin Wang. (2022) Liquid biopsies based on DNA methylation as biomarkers for the detection and prognosis of lung cancer. Clinical Epigenetics 14:1.
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Sana Masroor, Mohd Tanzeel Aalam, Owais Khan, Gunturu Narasimha Tanuj, Ravi Kumar Gandham, Sujoy K Dhara, Praveen K Gupta, Bishnu Prasad Mishra, Triveni Dutt, Gynendra Singh & Basavaraj K Sajjanar. (2022) Effect of acute heat shock on stress gene expression and DNA methylation in zebu (Bos indicus) and crossbred (Bos indicus × Bos taurus) dairy cattle. International Journal of Biometeorology 66:9, pages 1797-1809.
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Mohamed Salem, Rafet Al-Tobasei, Ali Ali & Brett Kenney. (2022) Integrated Analyses of DNA Methylation and Gene Expression of Rainbow Trout Muscle under Variable Ploidy and Muscle Atrophy Conditions. Genes 13:7, pages 1151.
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Clare J. Venney, Kyle W. Wellband, Eric Normandeau, Carolyne Houle, Dany Garant, Céline Audet & Louis Bernatchez. (2022) Thermal regime during parental sexual maturation, but not during offspring rearing, modulates DNA methylation in brook charr ( Salvelinus fontinalis ) . Proceedings of the Royal Society B: Biological Sciences 289:1974.
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Carole Blay, Pierrick Haffray, Jérôme Bugeon, Jonathan D’Ambrosio, Nicolas Dechamp, Guylaine Collewet, Florian Enez, Vincent Petit, Xavier Cousin, Geneviève Corraze, Florence Phocas & Mathilde Dupont-Nivet. (2021) Genetic Parameters and Genome-Wide Association Studies of Quality Traits Characterised Using Imaging Technologies in Rainbow Trout, Oncorhynchus mykiss. Frontiers in Genetics 12.
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