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Article

Hmo1 Is Required for TOR-Dependent Regulation of Ribosomal Protein Gene Transcription

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Pages 8015-8026 | Received 21 Jun 2007, Accepted 03 Sep 2007, Published online: 27 Mar 2023

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Ayako Higashino, Yuh Shiwa, Hirofumi Yoshikawa, Tetsuro Kokubo & Koji Kasahara. (2015) Both HMG boxes in Hmo1 are essential for DNA binding in vitro and in vivo. Bioscience, Biotechnology, and Biochemistry 79:3, pages 384-393.
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Jason J Workman, Hongfeng Chen & R Nicholas Laribee. (2014) Environmental signaling through the mechanistic target of rapamycin complex 1. Cell Cycle 13:5, pages 714-725.
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Joseph M. Johnson, Sarah L. French, Yvonne N. Osheim, Mingguang Li, Lindsey Hall, Ann L. Beyer & Jeffrey S. Smith. (2013) Rpd3- and Spt16-Mediated Nucleosome Assembly and Transcriptional Regulation on Yeast Ribosomal DNA Genes. Molecular and Cellular Biology 33:14, pages 2748-2759.
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Maria Cristina Bosio, Rodolfo Negri & Giorgio Dieci. (2011) Promoter architectures in the yeast ribosomal expression program. Transcription 2:2, pages 71-77.
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Alarich Reiter, Robert Steinbauer, Anja Philippi, Jochen Gerber, Herbert Tschochner, Philipp Milkereit & Joachim Griesenbeck. (2011) Reduction in Ribosomal Protein Synthesis Is Sufficient To Explain Major Effects on Ribosome Production after Short-Term TOR Inactivation in Saccharomyces cerevisiae. Molecular and Cellular Biology 31:4, pages 803-817.
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Frédéric Beckouet, Sylvie Labarre-Mariotte, Benjamin Albert, Yukiko Imazawa, Michel Werner, Olivier Gadal, Yasuhisa Nogi & Pierre Thuriaux. (2008) Two RNA Polymerase I Subunits Control the Binding and Release of Rrn3 during Transcription. Molecular and Cellular Biology 28:5, pages 1596-1605.
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Articles from other publishers (65)

Francisco Gutiérrez-Santiago & Francisco Navarro. (2023) Transcription by the Three RNA Polymerases under the Control of the TOR Signaling Pathway in Saccharomyces cerevisiae. Biomolecules 13:4, pages 642.
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Hayato Hirai & Kunihiro Ohta. (2023) Comparative Research: Regulatory Mechanisms of Ribosomal Gene Transcription in Saccharomyces cerevisiae and Schizosaccharomyces pombe. Biomolecules 13:2, pages 288.
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Sanjay Kumar, Muneera Mashkoor & Anne Grove. (2022) Yeast Crf1p: An activator in need is an activator indeed. Computational and Structural Biotechnology Journal 20, pages 107-116.
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Christopher Schächner, Philipp E. Merkl, Michael Pilsl, Katrin Schwank, Kristin Hergert, Sebastian Kruse, Philipp Milkereit, Herbert Tschochner & Joachim Griesenbeck. 2022. Ribosome Biogenesis. Ribosome Biogenesis 25 38 .
Wenyan Cao, Weiquan Zhao, Bolun Yang, Xinning Wang, Yu Shen, Tiandi Wei, Wensheng Qin, Zailu Li & Xiaoming Bao. (2021) Proteomic analysis revealed the roles of YRR1 deletion in enhancing the vanillin resistance of Saccharomyces cerevisiae. Microbial Cell Factories 20:1.
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David Shore, Sevil Zencir & Benjamin Albert. (2021) Transcriptional control of ribosome biogenesis in yeast: links to growth and stress signals. Biochemical Society Transactions 49:4, pages 1589-1599.
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Cyrielle Petibon, Mustafa Malik Ghulam, Mathieu Catala & Sherif Abou Elela. (2020) Regulation of ribosomal protein genes: An ordered anarchy. WIREs RNA 12:3.
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Sevil Zencir, Daniel Dilg, Maria Paula Rueda, David Shore & Benjamin Albert. (2020) Mechanisms coordinating ribosomal protein gene transcription in response to stress. Nucleic Acids Research 48:20, pages 11408-11420.
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Wen-Jie Shu, Runfa Chen, Zhao-Hong Yin, Feng Li, Heng Zhang & Hai-Ning Du. (2020) Rph1 coordinates transcription of ribosomal protein genes and ribosomal RNAs to control cell growth under nutrient stress conditions. Nucleic Acids Research 48:15, pages 8360-8373.
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Koji Kasahara, Risa Nakayama, Yuh Shiwa, Yu Kanesaki, Taichiro Ishige, Hirofumi Yoshikawa & Tetsuro Kokubo. (2020) Fpr1, a primary target of rapamycin, functions as a transcription factor for ribosomal protein genes cooperatively with Hmo1 in Saccharomyces cerevisiae. PLOS Genetics 16:6, pages e1008865.
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Emiliano Matos-Perdomo & Félix Machín. (2019) Nucleolar and Ribosomal DNA Structure under Stress: Yeast Lessons for Aging and Cancer. Cells 8:8, pages 779.
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Ze Cheng & Gloria Ann Brar. (2019) Global translation inhibition yields condition-dependent de-repression of ribosome biogenesis mRNAs. Nucleic Acids Research 47:10, pages 5061-5073.
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Rémi Malbec, Bayan Chami, Lorène Aeschbach, Gustavo A. Ruiz Buendía, Marius Socol, Pierre Joseph, Thierry Leïchlé, Evgeniya Trofimenko, Aurélien Bancaud & Vincent Dion. (2019) µLAS: Sizing of expanded trinucleotide repeats with femtomolar sensitivity in less than 5 minutes. Scientific Reports 9:1.
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A. Vizoso-Vázquez, A. Barreiro-Alonso, M. I. González-Siso, E. Rodríguez-Belmonte, M. Lamas-Maceiras & M. E. Cerdán. (2018) HMGB proteins involved in TOR signaling as general regulators of cell growth by controlling ribosome biogenesis. Current Genetics 64:6, pages 1205-1213.
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Jesús de la Cruz, Fernando Gómez-Herreros, Olga Rodríguez-Galán, Victoria Begley, María de la Cruz Muñoz-Centeno & Sebastián Chávez. (2017) Feedback regulation of ribosome assembly. Current Genetics 64:2, pages 393-404.
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Anne Grove. (2017) Control of RNA polymerase II-transcribed genes by direct binding of TOR kinase. Current Genetics 64:1, pages 131-135.
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Fernando Gómez-Herreros, Thanasis Margaritis, Olga Rodríguez-Galán, Vicent Pelechano, Victoria Begley, Gonzalo Millán-Zambrano, Macarena Morillo-Huesca, Mari Cruz Muñoz-Centeno, José E. Pérez-Ortín, Jesús de la Cruz, Frank C. P. Holstege & Sebastián Chávez. (2017) The ribosome assembly gene network is controlled by the feedback regulation of transcription elongation. Nucleic Acids Research 45:16, pages 9302-9318.
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Arvind Panday, Ashish Gupta, Kavitha Srinivasa, Lijuan Xiao, Mathew D. Smith & Anne Grove. (2017) DNA damage regulates direct association of TOR kinase with the RNA polymerase II–transcribed HMO1 gene . Molecular Biology of the Cell 28:18, pages 2449-2459.
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Arvind Panday & Anne Grove. (2017) Yeast HMO1: Linker Histone Reinvented. Microbiology and Molecular Biology Reviews 81:1.
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Yinfeng Zhang, Saman M. Najmi & David A. Schneider. (2017) Transcription factors that influence RNA polymerases I and II: To what extent is mechanism of action conserved?. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1860:2, pages 246-255.
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Divakaran Murugesapillai, Micah J. McCauley, L. James MaherIIIIII & Mark C. Williams. (2016) Single-molecule studies of high-mobility group B architectural DNA bending proteins. Biophysical Reviews 9:1, pages 17-40.
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Hongfeng Chen, Jason J. Workman, Brian D. Strahl & R. Nicholas Laribee. (2016) Histone H3 and TORC1 prevent organelle dysfunction and cell death by promoting nuclear retention of HMGB proteins. Epigenetics & Chromatin 9:1.
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Arvind Panday & Anne Grove. (2016) The high mobility group protein HMO1 functions as a linker histone in yeast. Epigenetics & Chromatin 9:1.
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Koji Kasahara, Ayako Higashino, Satoru Unzai, Hirofumi Yoshikawa & Tetsuro Kokubo. (2016) Oligomerization of Hmo1 mediated by box A is essential for DNA binding in vitro and in vivo . Genes to Cells 21:12, pages 1333-1352.
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Myung Sup Kim & Ji-Sook Hahn. (2016) Role of CK2-dependent phosphorylation of Ifh1 and Crf1 in transcriptional regulation of ribosomal protein genes in Saccharomyces cerevisiae. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1859:8, pages 1004-1013.
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Danni Wang, Andres Mansisidor, Gayathri Prabhakar & Andreas Hochwagen. (2016) Condensin and Hmo1 Mediate a Starvation-Induced Transcriptional Position Effect within the Ribosomal DNA Array. Cell Reports 14:5, pages 1010-1017.
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Bruno D. Fonseca, Tyson E. Graber, Huy-Dung Hoang, Asier González, Alexander A. Soukas, Greco Hernández, Tommy Alain, Stephanie L. Swift, Ronit Weisman, Christian Meyer, Christophe Robaglia, Joseph Avruch & Michael N. Hall. 2016. Evolution of the Protein Synthesis Machinery and Its Regulation. Evolution of the Protein Synthesis Machinery and Its Regulation 327 411 .
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